| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is bax [H]
Identifier: 119774938
GI number: 119774938
Start: 2194523
End: 2195395
Strand: Reverse
Name: bax [H]
Synonym: Sama_1803
Alternate gene names: 119774938
Gene position: 2195395-2194523 (Counterclockwise)
Preceding gene: 119774940
Following gene: 119774937
Centisome position: 50.98
GC content: 50.4
Gene sequence:
>873_bases ATGGTGATTCTGCTTCTGAGAGTCAGCCTGATCCCGGACCTCGAGGAAAAAGGTAAGTCTTTGAGAGTATTACCTATGCT TTCACAGACAACGCGCTTGCCTGATTTCGACGCCTACGCCGACGTGGGTGAGAAAAAGAGTGCATTTTTCGAATTTTTAC GTCCGATAGTGCAGGACATCAATCGCGCTACGCTGAAGAAAAGGCGTTTTGTCAGTGAAATAATGCTGAAACTCGAAGCT GGAAAGCCTCTATCAGCAAAGGAACAGCGTCGTTTAGCTGCGTTGGGCGTTGAGTTCGGCGTACTTGAATCAGAACAAAT CTCAGAGTGGAACACCACTCAGACCAAACAATTGGCACAGAGCCTCCTAAAACGCATCGATATAATTCCTGAATCGCTAG TGCTGGTGCAGGCCGCGAATGAGAGCGGGTGGGGCAGTTCGCGATTTGCCCGTGAAGGACTGAATCTTTTCGGTCAGTGG TGTTACACCAAGGGCTGCGGCATGGTGCCTTCGGCCAGAGCCCAGGACATGAGTCACGAAGTGACAGTGTTTAATACGGT GGAAGATGCCATTGCCTCTTATATCAATAACCTGAATACACATTCGGCTTATAAACTTTTTCGCGCCATTCGTGCAGAGC AGCGAGCCAAGGGCATAGAACCTGCGGCGGATGCACTGGTGTATGGCCTGGTCAATTATTCCGAGCGACGTGAAGCCTAC GTCGATGAATTGCTGCAGATGCTGCGGCACAATAAAGTCTACCTGGAACCTCAAGATGAACCCGAGAATCAAACTCTGTC TGCTGTCCAGTCTGATGCTGTCGGCCCCGGCATTCGCCACGACCGTTTCGTTGGAGTACAGCGGATTTCATGA
Upstream 100 bases:
>100_bases ATAATTTTGTCCGCGAACAGCGACTCGCTGCCACAATGAGAGTAACTATTTGAAAACCGGAAAAATATCAACACTTATTC TTGCCTTCGCGCTCTGCTTC
Downstream 100 bases:
>100_bases CAGATTGAAGCTGGTTAAAAAGGGCGATTTCCCAAGAACGGAACTTACCTTTTCGGTGCCCATGAAAGAAGGCTGCAAGA TAGTGAAGGGCGAAATTACC
Product: bax protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 290; Mature: 290
Protein sequence:
>290_residues MVILLLRVSLIPDLEEKGKSLRVLPMLSQTTRLPDFDAYADVGEKKSAFFEFLRPIVQDINRATLKKRRFVSEIMLKLEA GKPLSAKEQRRLAALGVEFGVLESEQISEWNTTQTKQLAQSLLKRIDIIPESLVLVQAANESGWGSSRFAREGLNLFGQW CYTKGCGMVPSARAQDMSHEVTVFNTVEDAIASYINNLNTHSAYKLFRAIRAEQRAKGIEPAADALVYGLVNYSERREAY VDELLQMLRHNKVYLEPQDEPENQTLSAVQSDAVGPGIRHDRFVGVQRIS
Sequences:
>Translated_290_residues MVILLLRVSLIPDLEEKGKSLRVLPMLSQTTRLPDFDAYADVGEKKSAFFEFLRPIVQDINRATLKKRRFVSEIMLKLEA GKPLSAKEQRRLAALGVEFGVLESEQISEWNTTQTKQLAQSLLKRIDIIPESLVLVQAANESGWGSSRFAREGLNLFGQW CYTKGCGMVPSARAQDMSHEVTVFNTVEDAIASYINNLNTHSAYKLFRAIRAEQRAKGIEPAADALVYGLVNYSERREAY VDELLQMLRHNKVYLEPQDEPENQTLSAVQSDAVGPGIRHDRFVGVQRIS >Mature_290_residues MVILLLRVSLIPDLEEKGKSLRVLPMLSQTTRLPDFDAYADVGEKKSAFFEFLRPIVQDINRATLKKRRFVSEIMLKLEA GKPLSAKEQRRLAALGVEFGVLESEQISEWNTTQTKQLAQSLLKRIDIIPESLVLVQAANESGWGSSRFAREGLNLFGQW CYTKGCGMVPSARAQDMSHEVTVFNTVEDAIASYINNLNTHSAYKLFRAIRAEQRAKGIEPAADALVYGLVNYSERREAY VDELLQMLRHNKVYLEPQDEPENQTLSAVQSDAVGPGIRHDRFVGVQRIS
Specific function: Unknown
COG id: COG2992
COG function: function code R; Uncharacterized FlgJ-related protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI48994948, Length=225, Percent_Identity=32, Blast_Score=117, Evalue=9e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002901 [H]
Pfam domain/function: PF01832 Glucosaminidase [H]
EC number: NA
Molecular weight: Translated: 32685; Mature: 32685
Theoretical pI: Translated: 7.57; Mature: 7.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVILLLRVSLIPDLEEKGKSLRVLPMLSQTTRLPDFDAYADVGEKKSAFFEFLRPIVQDI CEEEEEEHHHCCCHHHCCCCEEEEECHHHHCCCCCCHHHHCCCCHHHHHHHHHHHHHHHH NRATLKKRRFVSEIMLKLEAGKPLSAKEQRRLAALGVEFGVLESEQISEWNTTQTKQLAQ HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHH SLLKRIDIIPESLVLVQAANESGWGSSRFAREGLNLFGQWCYTKGCGMVPSARAQDMSHE HHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCC VTVFNTVEDAIASYINNLNTHSAYKLFRAIRAEQRAKGIEPAADALVYGLVNYSERREAY EEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH VDELLQMLRHNKVYLEPQDEPENQTLSAVQSDAVGPGIRHDRFVGVQRIS HHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHCCCCCCCCHHHCCCEECC >Mature Secondary Structure MVILLLRVSLIPDLEEKGKSLRVLPMLSQTTRLPDFDAYADVGEKKSAFFEFLRPIVQDI CEEEEEEHHHCCCHHHCCCCEEEEECHHHHCCCCCCHHHHCCCCHHHHHHHHHHHHHHHH NRATLKKRRFVSEIMLKLEAGKPLSAKEQRRLAALGVEFGVLESEQISEWNTTQTKQLAQ HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHH SLLKRIDIIPESLVLVQAANESGWGSSRFAREGLNLFGQWCYTKGCGMVPSARAQDMSHE HHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCC VTVFNTVEDAIASYINNLNTHSAYKLFRAIRAEQRAKGIEPAADALVYGLVNYSERREAY EEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH VDELLQMLRHNKVYLEPQDEPENQTLSAVQSDAVGPGIRHDRFVGVQRIS HHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHCCCCCCCCHHHCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8041620; 9278503; 1544897 [H]