| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is pgm [H]
Identifier: 119774842
GI number: 119774842
Start: 2085048
End: 2086730
Strand: Direct
Name: pgm [H]
Synonym: Sama_1706
Alternate gene names: 119774842
Gene position: 2085048-2086730 (Clockwise)
Preceding gene: 119774841
Following gene: 119774844
Centisome position: 48.42
GC content: 53.54
Gene sequence:
>1683_bases TTGGCTATCCATGACCGCGCAGGCAAGCAAGCACAGCAAGGGGATTTGGTTAATATCCCCAAACTGATGAGCCACTATTA TCGACTCTTGCCGGATGCAAGCGATCCCGCTCAGAAAGTCAGTTTCGGTACCTCCGGCCATCGCGGCTGTGCATTTCACC GAAGTTTTAACGAGCAGCATATCCTTGCCATTGCCCAGGCGGTGGTCGACTGGCGTACCCAGGCTGACATTACAGGTCCC CTTTACCTTGGCATGGACACCCATGCGCTGTCCCAGGCGGCGTATTTGTCTGTGATTGAAGTGCTGATTGCCAACAAGGT TCAGGTGTTGGCCCAGCGGGATGACGCATACACACCAACACCCGTGGTCAGTCAGGCAATTGTGGCTGCCAATCGTCATC AAACTGGTGAAGACGCATTGCTCAGTGACGGTATCATCATCACGCCGTCACATAACCCACCTCAGGACGGGGGTATCAAG TACAATCCGCCCCATGGTGGGCCGGCGGAAGGGGATATCACTTCCTGGATTGAAACCCGTGCCAATCACTATCTCGCCCA CGGCCTGGATGGTGTTCGTCGGGTTAATTACGGTATCGCCTCTGGTCTTTCGCTGCTTAAACATGTAGACCTGATTTCGC CTTATGTTCAAAGCCTTGCTGAAGTCATTGACATGGCCGCGATTGCTAAAGCCGGTGTGCGTATGGGGGTCGACCCTCTG GGCGGTAGCGGCATCCATTACTGGCAGCCTATCGCCGAGCATTATGGGCTCAATATCGAGGTGGTAAATCAGGCAATTGA TCCGACCTTCGATTTTATGCCATTGGATAAAGACGGAAAAATCCGCATGGACTGCTCGTCGCCCTATGCCATGGCAGGAC TATTGGTACATAAAGATGAGTTTGATATCTGTGTCGGTAACGACCCGGATTATGACCGCCACGGTATTGTTTGCCCCGGT AGTGGCCTGATGGATCCCAACCATTATCTTGCAGTGGCTATCGATTATCTGCTCGGCCACAGGCCAAACTGGGCCAAGAC GTTGGCGGTTGGCAAAACCCTGGTATCCAGTGCCCTGATAGACAAGGTCTGCATGGCCCATGGGGTTCCCCTGATGGAAG TACCCGTGGGCTTTAAGTGGTTTGTTGATGGCCTCGCTGATAGCAGTGTGTGTTTTGGCGGTGAAGAAAGCGCCGGGGCG GCTTTCCTTAAAATGGATGGCAGCACCTGGTGCACCGATAAAGACGGCTTTATTCTGGCGCTGCTGGCGGCAGAAATTCT CGCGGTTACCGGTAAAACCCCTGCCGAGCGCTACGAAGAGCTGGTTGCCGAACATGGTCGCAGTTTTTATAAACGTATCG ATAGCCCACTTAATCCCAAAATGAAAGCCAAGTTCGGTGCGCTGAATGCGCAAACCCTTGGCGCGACTTCTGTCGCAGGC GATGCCATTACCGCAGTGCTGACCAAGGCGCCCGGCAACGGTGCTGCCATTGGTGGCATCAAGGTGTGTACCGATAAAGG CTGGTTCGCCGCGCGTCCATCCGGTACTGAGCCCTTGTTTAAGCTCTATGCCGAAAGCTTTGTCAGTGAGGCGCACCTTG GCGAGTTGATTTCCGATGCGCAAAGTTTGTTGGGTACTGCGCTTAAGGCTATCAAGCTGTCACAGTTTGATATGAAGGTA TAA
Upstream 100 bases:
>100_bases TGGTGCAACTGGGTTGCGATCCGGTTCGTGCCAAATCCCTGGGTGAGCTGGCGCTCGCCTGAAACGACACTATTAACCAT CCACGATAAGGAATTCCGTC
Downstream 100 bases:
>100_bases AAAACGCGCCGTTGGGCGCGTTTTTTATTGGATAACGACTTGTTTCATCGGCTTGCGGTATCAATACTCGATGTGGCAAC TGGGCAGGTTGTTTTTATCG
Product: phosphoglucomutase
Products: NA
Alternate protein names: PGM; Glucose phosphomutase [H]
Number of amino acids: Translated: 560; Mature: 559
Protein sequence:
>560_residues MAIHDRAGKQAQQGDLVNIPKLMSHYYRLLPDASDPAQKVSFGTSGHRGCAFHRSFNEQHILAIAQAVVDWRTQADITGP LYLGMDTHALSQAAYLSVIEVLIANKVQVLAQRDDAYTPTPVVSQAIVAANRHQTGEDALLSDGIIITPSHNPPQDGGIK YNPPHGGPAEGDITSWIETRANHYLAHGLDGVRRVNYGIASGLSLLKHVDLISPYVQSLAEVIDMAAIAKAGVRMGVDPL GGSGIHYWQPIAEHYGLNIEVVNQAIDPTFDFMPLDKDGKIRMDCSSPYAMAGLLVHKDEFDICVGNDPDYDRHGIVCPG SGLMDPNHYLAVAIDYLLGHRPNWAKTLAVGKTLVSSALIDKVCMAHGVPLMEVPVGFKWFVDGLADSSVCFGGEESAGA AFLKMDGSTWCTDKDGFILALLAAEILAVTGKTPAERYEELVAEHGRSFYKRIDSPLNPKMKAKFGALNAQTLGATSVAG DAITAVLTKAPGNGAAIGGIKVCTDKGWFAARPSGTEPLFKLYAESFVSEAHLGELISDAQSLLGTALKAIKLSQFDMKV
Sequences:
>Translated_560_residues MAIHDRAGKQAQQGDLVNIPKLMSHYYRLLPDASDPAQKVSFGTSGHRGCAFHRSFNEQHILAIAQAVVDWRTQADITGP LYLGMDTHALSQAAYLSVIEVLIANKVQVLAQRDDAYTPTPVVSQAIVAANRHQTGEDALLSDGIIITPSHNPPQDGGIK YNPPHGGPAEGDITSWIETRANHYLAHGLDGVRRVNYGIASGLSLLKHVDLISPYVQSLAEVIDMAAIAKAGVRMGVDPL GGSGIHYWQPIAEHYGLNIEVVNQAIDPTFDFMPLDKDGKIRMDCSSPYAMAGLLVHKDEFDICVGNDPDYDRHGIVCPG SGLMDPNHYLAVAIDYLLGHRPNWAKTLAVGKTLVSSALIDKVCMAHGVPLMEVPVGFKWFVDGLADSSVCFGGEESAGA AFLKMDGSTWCTDKDGFILALLAAEILAVTGKTPAERYEELVAEHGRSFYKRIDSPLNPKMKAKFGALNAQTLGATSVAG DAITAVLTKAPGNGAAIGGIKVCTDKGWFAARPSGTEPLFKLYAESFVSEAHLGELISDAQSLLGTALKAIKLSQFDMKV >Mature_559_residues AIHDRAGKQAQQGDLVNIPKLMSHYYRLLPDASDPAQKVSFGTSGHRGCAFHRSFNEQHILAIAQAVVDWRTQADITGPL YLGMDTHALSQAAYLSVIEVLIANKVQVLAQRDDAYTPTPVVSQAIVAANRHQTGEDALLSDGIIITPSHNPPQDGGIKY NPPHGGPAEGDITSWIETRANHYLAHGLDGVRRVNYGIASGLSLLKHVDLISPYVQSLAEVIDMAAIAKAGVRMGVDPLG GSGIHYWQPIAEHYGLNIEVVNQAIDPTFDFMPLDKDGKIRMDCSSPYAMAGLLVHKDEFDICVGNDPDYDRHGIVCPGS GLMDPNHYLAVAIDYLLGHRPNWAKTLAVGKTLVSSALIDKVCMAHGVPLMEVPVGFKWFVDGLADSSVCFGGEESAGAA FLKMDGSTWCTDKDGFILALLAAEILAVTGKTPAERYEELVAEHGRSFYKRIDSPLNPKMKAKFGALNAQTLGATSVAGD AITAVLTKAPGNGAAIGGIKVCTDKGWFAARPSGTEPLFKLYAESFVSEAHLGELISDAQSLLGTALKAIKLSQFDMKV
Specific function: This enzyme participates in both the breakdown and synthesis of glucose [H]
COG id: COG0033
COG function: function code G; Phosphoglucomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphohexose mutase family [H]
Homologues:
Organism=Homo sapiens, GI290463102, Length=449, Percent_Identity=24.4988864142539, Blast_Score=83, Evalue=7e-16, Organism=Homo sapiens, GI21361621, Length=438, Percent_Identity=25.3424657534247, Blast_Score=76, Evalue=8e-14, Organism=Escherichia coli, GI1786904, Length=549, Percent_Identity=57.9234972677596, Blast_Score=648, Evalue=0.0, Organism=Caenorhabditis elegans, GI17535441, Length=568, Percent_Identity=26.4084507042254, Blast_Score=100, Evalue=3e-21, Organism=Saccharomyces cerevisiae, GI6322722, Length=404, Percent_Identity=28.7128712871287, Blast_Score=99, Evalue=1e-21, Organism=Saccharomyces cerevisiae, GI6323752, Length=465, Percent_Identity=25.8064516129032, Blast_Score=99, Evalue=2e-21, Organism=Drosophila melanogaster, GI17864244, Length=566, Percent_Identity=24.7349823321555, Blast_Score=97, Evalue=3e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005844 - InterPro: IPR016055 - InterPro: IPR005845 - InterPro: IPR005846 - InterPro: IPR005843 - InterPro: IPR016066 - InterPro: IPR005852 [H]
Pfam domain/function: PF02878 PGM_PMM_I; PF02879 PGM_PMM_II; PF02880 PGM_PMM_III; PF00408 PGM_PMM_IV [H]
EC number: =5.4.2.2 [H]
Molecular weight: Translated: 60005; Mature: 59874
Theoretical pI: Translated: 6.14; Mature: 6.14
Prosite motif: PS00710 PGM_PMM
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIHDRAGKQAQQGDLVNIPKLMSHYYRLLPDASDPAQKVSFGTSGHRGCAFHRSFNEQH CCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCEEECCCCCHHH ILAIAQAVVDWRTQADITGPLYLGMDTHALSQAAYLSVIEVLIANKVQVLAQRDDAYTPT HHHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC PVVSQAIVAANRHQTGEDALLSDGIIITPSHNPPQDGGIKYNPPHGGPAEGDITSWIETR HHHHHHHHHHCCCCCCCCHHHCCCEEECCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHH ANHYLAHGLDGVRRVNYGIASGLSLLKHVDLISPYVQSLAEVIDMAAIAKAGVRMGVDPL HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC GGSGIHYWQPIAEHYGLNIEVVNQAIDPTFDFMPLDKDGKIRMDCSSPYAMAGLLVHKDE CCCCCHHHHHHHHHCCCCEEEEHHHCCCCCCCEECCCCCCEEEECCCCHHHHEEEEECCC FDICVGNDPDYDRHGIVCPGSGLMDPNHYLAVAIDYLLGHRPNWAKTLAVGKTLVSSALI CCEEECCCCCCCCCCEECCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH DKVCMAHGVPLMEVPVGFKWFVDGLADSSVCFGGEESAGAAFLKMDGSTWCTDKDGFILA HHHHHHCCCCEEECCCCHHHHHHCCCCCCEEECCCCCCCEEEEEECCCEEECCCCCHHHH LLAAEILAVTGKTPAERYEELVAEHGRSFYKRIDSPLNPKMKAKFGALNAQTLGATSVAG HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCCHHHCC DAITAVLTKAPGNGAAIGGIKVCTDKGWFAARPSGTEPLFKLYAESFVSEAHLGELISDA HHHHHHEEECCCCCCEECCEEEEECCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH QSLLGTALKAIKLSQFDMKV HHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure AIHDRAGKQAQQGDLVNIPKLMSHYYRLLPDASDPAQKVSFGTSGHRGCAFHRSFNEQH CCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCEEECCCCCHHH ILAIAQAVVDWRTQADITGPLYLGMDTHALSQAAYLSVIEVLIANKVQVLAQRDDAYTPT HHHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC PVVSQAIVAANRHQTGEDALLSDGIIITPSHNPPQDGGIKYNPPHGGPAEGDITSWIETR HHHHHHHHHHCCCCCCCCHHHCCCEEECCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHH ANHYLAHGLDGVRRVNYGIASGLSLLKHVDLISPYVQSLAEVIDMAAIAKAGVRMGVDPL HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC GGSGIHYWQPIAEHYGLNIEVVNQAIDPTFDFMPLDKDGKIRMDCSSPYAMAGLLVHKDE CCCCCHHHHHHHHHCCCCEEEEHHHCCCCCCCEECCCCCCEEEECCCCHHHHEEEEECCC FDICVGNDPDYDRHGIVCPGSGLMDPNHYLAVAIDYLLGHRPNWAKTLAVGKTLVSSALI CCEEECCCCCCCCCCEECCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH DKVCMAHGVPLMEVPVGFKWFVDGLADSSVCFGGEESAGAAFLKMDGSTWCTDKDGFILA HHHHHHCCCCEEECCCCHHHHHHCCCCCCEEECCCCCCCEEEEEECCCEEECCCCCHHHH LLAAEILAVTGKTPAERYEELVAEHGRSFYKRIDSPLNPKMKAKFGALNAQTLGATSVAG HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCCHHHCC DAITAVLTKAPGNGAAIGGIKVCTDKGWFAARPSGTEPLFKLYAESFVSEAHLGELISDA HHHHHHEEECCCCCCEECCEEEEECCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH QSLLGTALKAIKLSQFDMKV HHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8083177; 8905232; 9278503; 8011018 [H]