Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119774839

Identifier: 119774839

GI number: 119774839

Start: 2083061

End: 2083282

Strand: Reverse

Name: 119774839

Synonym: Sama_1703

Alternate gene names: NA

Gene position: 2083282-2083061 (Counterclockwise)

Preceding gene: 119774840

Following gene: 119774838

Centisome position: 48.38

GC content: 47.3

Gene sequence:

>222_bases
ATGTTAGCCGAGTATATGCAGCAGATAGAAACCCTGGGATTAAACCTGTTTTTCGCTGCCATATTCTTCTTCATTGGCAT
GGCAATCCATGACGTGCTGAAACAGGGCAACGTGCCCAAGTTTGGCCGTTATATCGTGTGGTTGGTGCTGTTTTTAGGGT
GTGCAGGCTTTATCGCCAAGGGCATTATTCAAATGACTTGGGAAGGCGCCGGTATAGGCTAA

Upstream 100 bases:

>100_bases
GTAAAGGCTATAGCAGACGCTAATATGATGTGATATATTCGCGCCTCTTTTTCAAGGCCGGGTTTTACCCCTACGCCAAG
CAACGCCGGAGTCAGCGCTG

Downstream 100 bases:

>100_bases
TGACAAAATGGCAAAAGAAGCAGCAGACAGAACAACAATCGATCTCTTTGCCGATGAAAAACGCCGTGGACGTCCCAGAA
GCAATCCCCTTCCCCGGGAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 73; Mature: 73

Protein sequence:

>73_residues
MLAEYMQQIETLGLNLFFAAIFFFIGMAIHDVLKQGNVPKFGRYIVWLVLFLGCAGFIAKGIIQMTWEGAGIG

Sequences:

>Translated_73_residues
MLAEYMQQIETLGLNLFFAAIFFFIGMAIHDVLKQGNVPKFGRYIVWLVLFLGCAGFIAKGIIQMTWEGAGIG
>Mature_73_residues
MLAEYMQQIETLGLNLFFAAIFFFIGMAIHDVLKQGNVPKFGRYIVWLVLFLGCAGFIAKGIIQMTWEGAGIG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8131; Mature: 8131

Theoretical pI: Translated: 7.35; Mature: 7.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
5.5 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAEYMQQIETLGLNLFFAAIFFFIGMAIHDVLKQGNVPKFGRYIVWLVLFLGCAGFIAK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
GIIQMTWEGAGIG
HHHHHHCCCCCCC
>Mature Secondary Structure
MLAEYMQQIETLGLNLFFAAIFFFIGMAIHDVLKQGNVPKFGRYIVWLVLFLGCAGFIAK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
GIIQMTWEGAGIG
HHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA