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The map label for this gene is rpfG [H]

Identifier: 119774676

GI number: 119774676

Start: 1875258

End: 1876514

Strand: Reverse

Name: rpfG [H]

Synonym: Sama_1539

Alternate gene names: 119774676

Gene position: 1876514-1875258 (Counterclockwise)

Preceding gene: 119774678

Following gene: 119774675

Centisome position: 43.58

GC content: 47.57

Gene sequence:

>1257_bases
ATGAGTAAAAGTTGTAAGGTTCACGTCAACCAACTTCAGGTTGGAAATTTTGTTCGCCTGCCTGTTGCGTGGAAGGATCA
TCCTTTTTTATTCAACAGTTTCCGTGTAAAACAAGAAGCGCAAATTCAACTTATCCGCAGCCTCGGCATAGAGCACGTCT
TTGTTGATTTGGATCGCAGCGACGTGATGCCGCTGCAGGAGCAACCAGTCTCAATGTCTGCGCCGGCAAAGGATCTGGCT
CCACTTATTGACGAACTGGACAAAAAAAAGCAGGAACAGATTGAACAGCTGAAAAAGATGCGCCGGGAGCTTGGCAAAAC
CGAGCAGGAATTTGACCGTTCCCTCGCAAAAATGCGCAACCTAATCAATAAGCTCAGAAGCCGTCCACTGAATGCCATTC
AGGAAGCCGAAGAGCTGATTCAGGACATCACCCGTCAACTACTCGCCAATGAAAACCTGGTGTTACACCTGATGGGCGAT
GCCAAAAAAGACGACGGCATTTATTATCACTCTCTCAACGTGGCAGTGCTTTGCATGTTATTGGCCAAGGAGCTTGGCTG
GGACAGAGCGGATATTGAGGCCATAGGGATGGGAGCACTGTTTCATGATGTGGGTAAACTTAAGGTGCCAGCGCAAATCC
TGAAAAAACAGGTAGGTTTGACCGCTCCTGAAATCAACTTTATCAAACAGCATCCTAACTTCGGTGTGGAGTTTGTGAAA
TTAACCGATACCTTTCCTGAGGCCGCGCTCCCCGTTATTACCAATCATCACGAGTTTCTTGATGGCAGTGGTTATCCCAA
GGGGCTTAACGCTAAGGACCTTTGCCCACTGTCACAACTGGTTGCTGTGGTTAACGAATACGATACCCTGTGCCATCCCG
ATAATATCAGCAAGGCAAAAACCCCTTATGCGGCACTGGGTTATTTATTTAAAAACTACAAGGGCAAACTTAACAGCGAG
TTTGTTGGCCAGCTTATTCGTATGCTTGGGATTTACCCTCCAGGCTCTGTAGTGGAATTAACCAGTGGCCAGTTTGGTAT
GGTGATGGCGGTAAACATCAGTAAGCTGCTGTTTCCTCGTATCATGGTTTATGATGCGTTGGTGCCCAAAGATCAGGCCC
CCATTATCGATTTGGAAGCCGAAGGGCTAAGCATAGTACGCTGCCTGCCACCGGCTGCCCTGCCCGAAAAAATCTTTAAC
TATTTAAATCCAAGGGAGCGCGTGACCTACTTCTTTGGCCAGGAAAGTAAAAGCTGA

Upstream 100 bases:

>100_bases
GTAATTTCTTGTGGTTTGCTATGCTGACACGCCAGTTAAGTAATTGTAAAGTATTACCATTGGGCTAGACTAACCCCACC
CGGACTCCCACAGACCCACT

Downstream 100 bases:

>100_bases
TTGGCTTATAACCTGCGAGAGCCAAGGCTTTCGCATTTATACGCAAGTTGTCTTGCCCCTGCCCGCCCCTTTGTCTAGTG
TGAAAGTGTATTCCTTTACC

Product: putative metal dependent phosphohydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 418; Mature: 417

Protein sequence:

>418_residues
MSKSCKVHVNQLQVGNFVRLPVAWKDHPFLFNSFRVKQEAQIQLIRSLGIEHVFVDLDRSDVMPLQEQPVSMSAPAKDLA
PLIDELDKKKQEQIEQLKKMRRELGKTEQEFDRSLAKMRNLINKLRSRPLNAIQEAEELIQDITRQLLANENLVLHLMGD
AKKDDGIYYHSLNVAVLCMLLAKELGWDRADIEAIGMGALFHDVGKLKVPAQILKKQVGLTAPEINFIKQHPNFGVEFVK
LTDTFPEAALPVITNHHEFLDGSGYPKGLNAKDLCPLSQLVAVVNEYDTLCHPDNISKAKTPYAALGYLFKNYKGKLNSE
FVGQLIRMLGIYPPGSVVELTSGQFGMVMAVNISKLLFPRIMVYDALVPKDQAPIIDLEAEGLSIVRCLPPAALPEKIFN
YLNPRERVTYFFGQESKS

Sequences:

>Translated_418_residues
MSKSCKVHVNQLQVGNFVRLPVAWKDHPFLFNSFRVKQEAQIQLIRSLGIEHVFVDLDRSDVMPLQEQPVSMSAPAKDLA
PLIDELDKKKQEQIEQLKKMRRELGKTEQEFDRSLAKMRNLINKLRSRPLNAIQEAEELIQDITRQLLANENLVLHLMGD
AKKDDGIYYHSLNVAVLCMLLAKELGWDRADIEAIGMGALFHDVGKLKVPAQILKKQVGLTAPEINFIKQHPNFGVEFVK
LTDTFPEAALPVITNHHEFLDGSGYPKGLNAKDLCPLSQLVAVVNEYDTLCHPDNISKAKTPYAALGYLFKNYKGKLNSE
FVGQLIRMLGIYPPGSVVELTSGQFGMVMAVNISKLLFPRIMVYDALVPKDQAPIIDLEAEGLSIVRCLPPAALPEKIFN
YLNPRERVTYFFGQESKS
>Mature_417_residues
SKSCKVHVNQLQVGNFVRLPVAWKDHPFLFNSFRVKQEAQIQLIRSLGIEHVFVDLDRSDVMPLQEQPVSMSAPAKDLAP
LIDELDKKKQEQIEQLKKMRRELGKTEQEFDRSLAKMRNLINKLRSRPLNAIQEAEELIQDITRQLLANENLVLHLMGDA
KKDDGIYYHSLNVAVLCMLLAKELGWDRADIEAIGMGALFHDVGKLKVPAQILKKQVGLTAPEINFIKQHPNFGVEFVKL
TDTFPEAALPVITNHHEFLDGSGYPKGLNAKDLCPLSQLVAVVNEYDTLCHPDNISKAKTPYAALGYLFKNYKGKLNSEF
VGQLIRMLGIYPPGSVVELTSGQFGMVMAVNISKLLFPRIMVYDALVPKDQAPIIDLEAEGLSIVRCLPPAALPEKIFNY
LNPRERVTYFFGQESKS

Specific function: Positively regulates the synthesis of extracellular enzymes and extracellular polysaccharides. The cell-cell signaling system encoded by rpf genes is required for full virulence and is implicated in regulation of the formation and dispersal of biofilms [H

COG id: COG2206

COG function: function code T; HD-GYP domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR003607
- InterPro:   IPR001789 [H]

Pfam domain/function: PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 47087; Mature: 46956

Theoretical pI: Translated: 7.61; Mature: 7.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKSCKVHVNQLQVGNFVRLPVAWKDHPFLFNSFRVKQEAQIQLIRSLGIEHVFVDLDRS
CCCCCEEEEEEEECCCEEEECEEECCCCCEEHHHCCCHHHHHHHHHHCCCCEEEEECCCC
DVMPLQEQPVSMSAPAKDLAPLIDELDKKKQEQIEQLKKMRRELGKTEQEFDRSLAKMRN
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
LINKLRSRPLNAIQEAEELIQDITRQLLANENLVLHLMGDAKKDDGIYYHSLNVAVLCML
HHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEEHHHHHHHHHH
LAKELGWDRADIEAIGMGALFHDVGKLKVPAQILKKQVGLTAPEINFIKQHPNFGVEFVK
HHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCHHHHCCCCCCEEEEE
LTDTFPEAALPVITNHHEFLDGSGYPKGLNAKDLCPLSQLVAVVNEYDTLCHPDNISKAK
EECCCCCCCCCHHCCCHHHCCCCCCCCCCCCHHCCCHHHHHHHHHHHHHCCCCCCCCCCC
TPYAALGYLFKNYKGKLNSEFVGQLIRMLGIYPPGSVVELTSGQFGMVMAVNISKLLFPR
CHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCEEEECCCCCCEEEEECHHHHHHHH
IMVYDALVPKDQAPIIDLEAEGLSIVRCLPPAALPEKIFNYLNPRERVTYFFGQESKS
HHHHHHHCCCCCCCEEEECCCCCEEEEECCCCCCHHHHHHHCCHHHHEEEEECCCCCC
>Mature Secondary Structure 
SKSCKVHVNQLQVGNFVRLPVAWKDHPFLFNSFRVKQEAQIQLIRSLGIEHVFVDLDRS
CCCCEEEEEEEECCCEEEECEEECCCCCEEHHHCCCHHHHHHHHHHCCCCEEEEECCCC
DVMPLQEQPVSMSAPAKDLAPLIDELDKKKQEQIEQLKKMRRELGKTEQEFDRSLAKMRN
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
LINKLRSRPLNAIQEAEELIQDITRQLLANENLVLHLMGDAKKDDGIYYHSLNVAVLCML
HHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEEHHHHHHHHHH
LAKELGWDRADIEAIGMGALFHDVGKLKVPAQILKKQVGLTAPEINFIKQHPNFGVEFVK
HHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCHHHHCCCCCCEEEEE
LTDTFPEAALPVITNHHEFLDGSGYPKGLNAKDLCPLSQLVAVVNEYDTLCHPDNISKAK
EECCCCCCCCCHHCCCHHHCCCCCCCCCCCCHHCCCHHHHHHHHHHHHHCCCCCCCCCCC
TPYAALGYLFKNYKGKLNSEFVGQLIRMLGIYPPGSVVELTSGQFGMVMAVNISKLLFPR
CHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCEEEECCCCCCEEEEECHHHHHHHH
IMVYDALVPKDQAPIIDLEAEGLSIVRCLPPAALPEKIFNYLNPRERVTYFFGQESKS
HHHHHHHCCCCCCCEEEECCCCCEEEEECCCCCCHHHHHHHCCHHHHEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11123673 [H]