Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119774675

Identifier: 119774675

GI number: 119774675

Start: 1874831

End: 1875136

Strand: Reverse

Name: 119774675

Synonym: Sama_1538

Alternate gene names: NA

Gene position: 1875136-1874831 (Counterclockwise)

Preceding gene: 119774676

Following gene: 119774671

Centisome position: 43.55

GC content: 51.31

Gene sequence:

>306_bases
ATGACACCCTTACCCGATTTCGATACCTTAAGATGGATGGCGGACAACGAGCCGCAGGCCCTCGACGAGTTACGGGATAA
ACTCAACCGGGAAGTCATAGACGGCTCTGAAACAAACAAAGCACAGCTAGAATGCCTTATTTACGACCTTGAACGGCAAC
TCTCCCGCTGCACCAATCCCTACCACAGATGTGTCATCGCCACGGGCATGATGCGAAATAAACTTCACACCCTGCACTGT
GTCATCAATGAACCGGACTTTCTTGAACGCTCCTGCGCCGAGATAATTCCCCTGTTCAAGGCCTGA

Upstream 100 bases:

>100_bases
CCAAGGCTTTCGCATTTATACGCAAGTTGTCTTGCCCCTGCCCGCCCCTTTGTCTAGTGTGAAAGTGTATTCCTTTACCG
CAAACGCGAAAGGGGGCACC

Downstream 100 bases:

>100_bases
GACCTACAACCAACGCTTGCGTTTAAAAAAGAAATAGGTACCGGCGGCACTGGCCAGCATCATGGCAATGGCCATCGGGT
AACCGTATTGCCACTCGAGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 101; Mature: 100

Protein sequence:

>101_residues
MTPLPDFDTLRWMADNEPQALDELRDKLNREVIDGSETNKAQLECLIYDLERQLSRCTNPYHRCVIATGMMRNKLHTLHC
VINEPDFLERSCAEIIPLFKA

Sequences:

>Translated_101_residues
MTPLPDFDTLRWMADNEPQALDELRDKLNREVIDGSETNKAQLECLIYDLERQLSRCTNPYHRCVIATGMMRNKLHTLHC
VINEPDFLERSCAEIIPLFKA
>Mature_100_residues
TPLPDFDTLRWMADNEPQALDELRDKLNREVIDGSETNKAQLECLIYDLERQLSRCTNPYHRCVIATGMMRNKLHTLHCV
INEPDFLERSCAEIIPLFKA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11777; Mature: 11645

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
8.9 %Cys+Met (Translated Protein)
5.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
8.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPLPDFDTLRWMADNEPQALDELRDKLNREVIDGSETNKAQLECLIYDLERQLSRCTNP
CCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCH
YHRCVIATGMMRNKLHTLHCVINEPDFLERSCAEIIPLFKA
HHHHHHHHHHHHHHHHEEEEEECCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TPLPDFDTLRWMADNEPQALDELRDKLNREVIDGSETNKAQLECLIYDLERQLSRCTNP
CCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCH
YHRCVIATGMMRNKLHTLHCVINEPDFLERSCAEIIPLFKA
HHHHHHHHHHHHHHHHEEEEEECCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA