| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is 119774642
Identifier: 119774642
GI number: 119774642
Start: 1826766
End: 1827845
Strand: Reverse
Name: 119774642
Synonym: Sama_1505
Alternate gene names: NA
Gene position: 1827845-1826766 (Counterclockwise)
Preceding gene: 119774643
Following gene: 119774641
Centisome position: 42.45
GC content: 53.89
Gene sequence:
>1080_bases ATGCCTTTCTATTCCCAGCCAAAAGCACTGCATGCATTCGATGCCAAATCTGAGGCGCAGAAAATCGCCTTTGCTCCCAT CAGTTTCCAGGCCGCGCGCTGCTTGCTGCGCTTTGGGATCCTGGATGCCTTAGACCAGACAGGTGGCGCAAGTGCTGCGG ACATACACCAGAAACTCCAGTTGGCTGGCGAGCCATTGTCCCTGTATGCGATAGGCGTCTTGCTGGACATGGGACTCAGT ATGGGGCTGTTGTGGCACGAAAAAGACAAGTATCAACTGGACAAAACCGGCCATTTTTTACTGCACGATGGCATGAGCCG GACCAACCTCGAGTTTGTACATCATATTTGTTATCAGGGCATGTTTAAGCTGGAAGAGTCATTACTGAGCGGCACGCCTG CCGGACTGAGTCAGTTTGGCGATTGGGACACCCTGTATCCTGCACTTTCGTCCCTGCCCTTGGCGGCAAAAGAGAGCTGG TTTGCCTTCGACCACTTTTATTCAGACCATGCCTTCGACAGCCTGTTGCCTCTGGTATTGGCTGATAAGCCCGCGCATCT GGTCGATATCGGCGGCAACACCGGTAAATGGGCCAGAGCCTGCTGTAGTTATCAGCCAAACCTCAGGGTCACCATCATGG ACTTACCCCAGCAACTTGCTCTGGCTAACGAGGCCTGCACGGCGGCAGGCTTTGCCGAGCGTATCCATTATCACCCGGTG GATTTACTGGATGAGGCGCCACGCTTTGTTAAAGGCGCAGATGTGTACTGGATGAGTCAGTTTCTCGATTGCTTCAGCGA GGCACAAATCCGTGCCGTGCTCAGCCACACCCGGGAGGCCATGGGCAGGGAGAGCCGTCTCTATATTCTGGAAACCTTCT GGGATAAGCAGCCCAATGAAACAGCCGCCTATTGTGTGAATGCCACCAGCCTGTACTTTACCGCCATCGCCAACGGCAAC AGCCGAATGTACCACTCCAGTGTGTTTGAACGCCTCATCGCCGAGACCGGGCTCAGTATCAGCTGGCAAAAGCACAATAT TGGCCTGGGCCATACCCTGCTCTGTTGTGAGATTAAATAA
Upstream 100 bases:
>100_bases ACACCAAGGCCCGGGCTTTTTTACCCAAGCCTTGGCATAGATCATAAGTCCGGCCATTAAAGCCTGATACAAATAGCCTT TTTGAATTCAGGGCCGAGCT
Downstream 100 bases:
>100_bases TACTTACCGTATGATTAACAACATTCAAATATTATTACCATTACTCCCACCATAAACTGTTTTCACCGAGATACAGGAAC TGACTGTTTATGAGGAGTGC
Product: O-methyltransferase
Products: NA
Alternate protein names: SAM-Dependent Methyltransferase; O-Methyltransferase Family Protein; Methyltransferase Type; Methyltransferase; SAM-Dependent O-Methyltransferase
Number of amino acids: Translated: 359; Mature: 358
Protein sequence:
>359_residues MPFYSQPKALHAFDAKSEAQKIAFAPISFQAARCLLRFGILDALDQTGGASAADIHQKLQLAGEPLSLYAIGVLLDMGLS MGLLWHEKDKYQLDKTGHFLLHDGMSRTNLEFVHHICYQGMFKLEESLLSGTPAGLSQFGDWDTLYPALSSLPLAAKESW FAFDHFYSDHAFDSLLPLVLADKPAHLVDIGGNTGKWARACCSYQPNLRVTIMDLPQQLALANEACTAAGFAERIHYHPV DLLDEAPRFVKGADVYWMSQFLDCFSEAQIRAVLSHTREAMGRESRLYILETFWDKQPNETAAYCVNATSLYFTAIANGN SRMYHSSVFERLIAETGLSISWQKHNIGLGHTLLCCEIK
Sequences:
>Translated_359_residues MPFYSQPKALHAFDAKSEAQKIAFAPISFQAARCLLRFGILDALDQTGGASAADIHQKLQLAGEPLSLYAIGVLLDMGLS MGLLWHEKDKYQLDKTGHFLLHDGMSRTNLEFVHHICYQGMFKLEESLLSGTPAGLSQFGDWDTLYPALSSLPLAAKESW FAFDHFYSDHAFDSLLPLVLADKPAHLVDIGGNTGKWARACCSYQPNLRVTIMDLPQQLALANEACTAAGFAERIHYHPV DLLDEAPRFVKGADVYWMSQFLDCFSEAQIRAVLSHTREAMGRESRLYILETFWDKQPNETAAYCVNATSLYFTAIANGN SRMYHSSVFERLIAETGLSISWQKHNIGLGHTLLCCEIK >Mature_358_residues PFYSQPKALHAFDAKSEAQKIAFAPISFQAARCLLRFGILDALDQTGGASAADIHQKLQLAGEPLSLYAIGVLLDMGLSM GLLWHEKDKYQLDKTGHFLLHDGMSRTNLEFVHHICYQGMFKLEESLLSGTPAGLSQFGDWDTLYPALSSLPLAAKESWF AFDHFYSDHAFDSLLPLVLADKPAHLVDIGGNTGKWARACCSYQPNLRVTIMDLPQQLALANEACTAAGFAERIHYHPVD LLDEAPRFVKGADVYWMSQFLDCFSEAQIRAVLSHTREAMGRESRLYILETFWDKQPNETAAYCVNATSLYFTAIANGNS RMYHSSVFERLIAETGLSISWQKHNIGLGHTLLCCEIK
Specific function: Unknown
COG id: COG0500
COG function: function code QR; SAM-dependent methyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40047; Mature: 39916
Theoretical pI: Translated: 6.18; Mature: 6.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPFYSQPKALHAFDAKSEAQKIAFAPISFQAARCLLRFGILDALDQTGGASAADIHQKLQ CCCCCCCCHHHHCCCHHHHHEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH LAGEPLSLYAIGVLLDMGLSMGLLWHEKDKYQLDKTGHFLLHDGMSRTNLEFVHHICYQG HCCCCHHHHHHHHHHHHHHHHCEEEECCCCEEECCCCCEEEECCCCCCHHHHHHHHHHHH MFKLEESLLSGTPAGLSQFGDWDTLYPALSSLPLAAKESWFAFDHFYSDHAFDSLLPLVL HHHHHHHHHCCCCCCHHHCCCHHHHHHHHHCCCCHHCCCHHHHHHHHHHHHHHHHHHHHH ADKPAHLVDIGGNTGKWARACCSYQPNLRVTIMDLPQQLALANEACTAAGFAERIHYHPV CCCCCEEEEECCCCCHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCH DLLDEAPRFVKGADVYWMSQFLDCFSEAQIRAVLSHTREAMGRESRLYILETFWDKQPNE HHHHCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCC TAAYCVNATSLYFTAIANGNSRMYHSSVFERLIAETGLSISWQKHNIGLGHTLLCCEIK CCEEEEECCEEEEEEEECCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCEEEEEEEC >Mature Secondary Structure PFYSQPKALHAFDAKSEAQKIAFAPISFQAARCLLRFGILDALDQTGGASAADIHQKLQ CCCCCCCHHHHCCCHHHHHEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH LAGEPLSLYAIGVLLDMGLSMGLLWHEKDKYQLDKTGHFLLHDGMSRTNLEFVHHICYQG HCCCCHHHHHHHHHHHHHHHHCEEEECCCCEEECCCCCEEEECCCCCCHHHHHHHHHHHH MFKLEESLLSGTPAGLSQFGDWDTLYPALSSLPLAAKESWFAFDHFYSDHAFDSLLPLVL HHHHHHHHHCCCCCCHHHCCCHHHHHHHHHCCCCHHCCCHHHHHHHHHHHHHHHHHHHHH ADKPAHLVDIGGNTGKWARACCSYQPNLRVTIMDLPQQLALANEACTAAGFAERIHYHPV CCCCCEEEEECCCCCHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCH DLLDEAPRFVKGADVYWMSQFLDCFSEAQIRAVLSHTREAMGRESRLYILETFWDKQPNE HHHHCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCC TAAYCVNATSLYFTAIANGNSRMYHSSVFERLIAETGLSISWQKHNIGLGHTLLCCEIK CCEEEEECCEEEEEEEECCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA