Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is bglA [H]

Identifier: 119774539

GI number: 119774539

Start: 1701207

End: 1702565

Strand: Reverse

Name: bglA [H]

Synonym: Sama_1402

Alternate gene names: 119774539

Gene position: 1702565-1701207 (Counterclockwise)

Preceding gene: 119774544

Following gene: 119774538

Centisome position: 39.54

GC content: 54.23

Gene sequence:

>1359_bases
ATGACAACACTCTCGCATTTCACCCTGCCGGGCGATTCAGTAATGATGCAAAAAGATTTTTTATTTGGCGTCGCCACCGC
CTCGTTTCAAATTGAAGGCGACGCTGAACATCGTCAGCCCTGTATCTGGGACACCTTTTGCGATACCCCAGGCAAAATTG
CGGATGGTTCGAACGGTCAGGTTGCCTGCGATCATGTCAAGCTCTGGCGTGACGATGTTGACCTGATTGCCTCCCTTGGG
GTGGATGCCTACCGCCTGTCCATCAGTTGGGGACGGGTGTTACATCCCGATGGCAGTGTGAACCAGCGCGGCATGGATTT
TTACATTAATCTCCTGGATGAGCTTGGTCGCCGGGGCATTAACGTGTTCGTCACCCTCTACCACTGGGACTTACCTCAGC
ATCTTGAGGACAAAGGTGGCTGGCTCAATCGTGACACAGCAGTGGCCTTTGCCAACTACGCCGCCATTGTGGCCAACGCC
CTGGGTAACAGGGTGTATGCCTATTCAACCCTGAATGAGCCATTTTGCAGCGCCTTTCTCGGCTATGAGGCAGGTATTCA
CGCTCCCGGCCACAAGAGCCGTCAGCAGGGCCGCACAGCCGCCCACAATTTGCTGCTGGCCCACGGTATGGCAATGACTG
AAATTCGACGGGAAGCACCAGAGGCCAAAGCGGGCATAGTGCTTAATTTCAGCCCGGCTTATCCCTACACATCCAGTGCC
GGGGATGCCAACGCCGCCCGACTGGCCCATGAATATCACAACACCTGGTACTTGATGCCACTGATGGAAGGCCGTTATCC
GGACATCATCAATCAACTCGAGCCCCATGAACGCCCGGTTGTGGAGCCCGGTGATATGGATATCATCAGTACACCAATCG
ATTATCTGGGGATCAACTACTATACCCGTAACGTCTACCGCGCTGGCGGCCCGCTTGGCTTTGAAGAAGTGCGTATCGAT
AACGTGCCCCGTACCGCCATGGATTGGGAAATTTGCCCCCAGGCCTTTACCGACTTGCTGACAGGTCTGGCACAGGAATT
TAACCTGCCACCAATTTACATCACTGAAAATGGCGCTGCCGAAGACGATGCGCCATTTAACGGCACTGTGCACGACCCCA
TGCGACTGGACTATTTGCAGTCTCATCTGCTGGCTGTTCATCAGGCTATCGAACGCGGAGTGGATATCAAAGGCTACTTT
GCCTGGAGTCTGATGGACAACTTTGAGTGGGCGGAAGGCTACCGCAAACGCTTTGGACTGGTCTATGTCGACTATGGGAC
CCAGCAGCGCATACTCAAATCCAGCGCCAAAGCCTATCAGGGAATGCTTGCCATACGCCAAGAGGCCAGCCAACAATAA

Upstream 100 bases:

>100_bases
CCCTTGTCAACTTGTTTTACCGGTAAAACCCTGCTCTGACACCCAGTCACAGGGAGCTAAGGTAAAGGGCGCAAGGCTGA
GATCTGGAAAAAGGATAACG

Downstream 100 bases:

>100_bases
TAATAACGGAGGTCGCCATGCTGAGCGTCAGAGAAAAAATTGCTTATGGGCTGGGAGATACCGCCAGCAACATCGTTTTT
CAAACCGTCATGCTGTTCCT

Product: Beta-glucosidase

Products: NA

Alternate protein names: Beta-D-glucoside glucohydrolase; Cellobiase; Gentiobiase [H]

Number of amino acids: Translated: 452; Mature: 451

Protein sequence:

>452_residues
MTTLSHFTLPGDSVMMQKDFLFGVATASFQIEGDAEHRQPCIWDTFCDTPGKIADGSNGQVACDHVKLWRDDVDLIASLG
VDAYRLSISWGRVLHPDGSVNQRGMDFYINLLDELGRRGINVFVTLYHWDLPQHLEDKGGWLNRDTAVAFANYAAIVANA
LGNRVYAYSTLNEPFCSAFLGYEAGIHAPGHKSRQQGRTAAHNLLLAHGMAMTEIRREAPEAKAGIVLNFSPAYPYTSSA
GDANAARLAHEYHNTWYLMPLMEGRYPDIINQLEPHERPVVEPGDMDIISTPIDYLGINYYTRNVYRAGGPLGFEEVRID
NVPRTAMDWEICPQAFTDLLTGLAQEFNLPPIYITENGAAEDDAPFNGTVHDPMRLDYLQSHLLAVHQAIERGVDIKGYF
AWSLMDNFEWAEGYRKRFGLVYVDYGTQQRILKSSAKAYQGMLAIRQEASQQ

Sequences:

>Translated_452_residues
MTTLSHFTLPGDSVMMQKDFLFGVATASFQIEGDAEHRQPCIWDTFCDTPGKIADGSNGQVACDHVKLWRDDVDLIASLG
VDAYRLSISWGRVLHPDGSVNQRGMDFYINLLDELGRRGINVFVTLYHWDLPQHLEDKGGWLNRDTAVAFANYAAIVANA
LGNRVYAYSTLNEPFCSAFLGYEAGIHAPGHKSRQQGRTAAHNLLLAHGMAMTEIRREAPEAKAGIVLNFSPAYPYTSSA
GDANAARLAHEYHNTWYLMPLMEGRYPDIINQLEPHERPVVEPGDMDIISTPIDYLGINYYTRNVYRAGGPLGFEEVRID
NVPRTAMDWEICPQAFTDLLTGLAQEFNLPPIYITENGAAEDDAPFNGTVHDPMRLDYLQSHLLAVHQAIERGVDIKGYF
AWSLMDNFEWAEGYRKRFGLVYVDYGTQQRILKSSAKAYQGMLAIRQEASQQ
>Mature_451_residues
TTLSHFTLPGDSVMMQKDFLFGVATASFQIEGDAEHRQPCIWDTFCDTPGKIADGSNGQVACDHVKLWRDDVDLIASLGV
DAYRLSISWGRVLHPDGSVNQRGMDFYINLLDELGRRGINVFVTLYHWDLPQHLEDKGGWLNRDTAVAFANYAAIVANAL
GNRVYAYSTLNEPFCSAFLGYEAGIHAPGHKSRQQGRTAAHNLLLAHGMAMTEIRREAPEAKAGIVLNFSPAYPYTSSAG
DANAARLAHEYHNTWYLMPLMEGRYPDIINQLEPHERPVVEPGDMDIISTPIDYLGINYYTRNVYRAGGPLGFEEVRIDN
VPRTAMDWEICPQAFTDLLTGLAQEFNLPPIYITENGAAEDDAPFNGTVHDPMRLDYLQSHLLAVHQAIERGVDIKGYFA
WSLMDNFEWAEGYRKRFGLVYVDYGTQQRILKSSAKAYQGMLAIRQEASQQ

Specific function: Unknown

COG id: COG2723

COG function: function code G; Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 1 family [H]

Homologues:

Organism=Homo sapiens, GI32481206, Length=459, Percent_Identity=33.9869281045752, Blast_Score=240, Evalue=2e-63,
Organism=Homo sapiens, GI13273313, Length=461, Percent_Identity=33.8394793926247, Blast_Score=239, Evalue=4e-63,
Organism=Homo sapiens, GI110681710, Length=462, Percent_Identity=33.982683982684, Blast_Score=224, Evalue=1e-58,
Organism=Homo sapiens, GI24497614, Length=461, Percent_Identity=31.8872017353579, Blast_Score=175, Evalue=1e-43,
Organism=Homo sapiens, GI28376633, Length=447, Percent_Identity=30.6487695749441, Blast_Score=171, Evalue=1e-42,
Organism=Homo sapiens, GI190360571, Length=131, Percent_Identity=34.3511450381679, Blast_Score=75, Evalue=1e-13,
Organism=Escherichia coli, GI2367174, Length=478, Percent_Identity=28.8702928870293, Blast_Score=169, Evalue=2e-43,
Organism=Escherichia coli, GI1789070, Length=416, Percent_Identity=28.3653846153846, Blast_Score=152, Evalue=6e-38,
Organism=Escherichia coli, GI2367270, Length=465, Percent_Identity=28.1720430107527, Blast_Score=144, Evalue=1e-35,
Organism=Caenorhabditis elegans, GI17552856, Length=470, Percent_Identity=30.4255319148936, Blast_Score=201, Evalue=6e-52,
Organism=Caenorhabditis elegans, GI17539390, Length=463, Percent_Identity=29.3736501079914, Blast_Score=191, Evalue=8e-49,
Organism=Drosophila melanogaster, GI21356577, Length=463, Percent_Identity=33.4773218142549, Blast_Score=232, Evalue=4e-61,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001360
- InterPro:   IPR018120
- InterPro:   IPR017736
- InterPro:   IPR017853
- InterPro:   IPR013781 [H]

Pfam domain/function: PF00232 Glyco_hydro_1 [H]

EC number: =3.2.1.21 [H]

Molecular weight: Translated: 50681; Mature: 50549

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: PS00572 GLYCOSYL_HYDROL_F1_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTLSHFTLPGDSVMMQKDFLFGVATASFQIEGDAEHRQPCIWDTFCDTPGKIADGSNGQ
CCCCCEEECCCCCEEEEHHHEEEEEEEEEEECCCCCCCCCCEEHHHCCCCCCCCCCCCCC
VACDHVKLWRDDVDLIASLGVDAYRLSISWGRVLHPDGSVNQRGMDFYINLLDELGRRGI
EEEHHHHHHHHHHHHHHHCCCCEEEEEEECCEEECCCCCCCCCCHHHHHHHHHHHCCCCC
NVFVTLYHWDLPQHLEDKGGWLNRDTAVAFANYAAIVANALGNRVYAYSTLNEPFCSAFL
EEEEEEEECCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEEECCCCHHHHHHH
GYEAGIHAPGHKSRQQGRTAAHNLLLAHGMAMTEIRREAPEAKAGIVLNFSPAYPYTSSA
CCCCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCEEEEECCCCCCCCCC
GDANAARLAHEYHNTWYLMPLMEGRYPDIINQLEPHERPVVEPGDMDIISTPIDYLGINY
CCCHHHHHHHHHCCEEEEEEECCCCCHHHHHHCCCCCCCCCCCCCCCEECCCHHHHCCCC
YTRNVYRAGGPLGFEEVRIDNVPRTAMDWEICPQAFTDLLTGLAQEFNLPPIYITENGAA
EECEEEECCCCCCHHHEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCC
EDDAPFNGTVHDPMRLDYLQSHLLAVHQAIERGVDIKGYFAWSLMDNFEWAEGYRKRFGL
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEHHCCCHHHHHHHHHCCE
VYVDYGTQQRILKSSAKAYQGMLAIRQEASQQ
EEEECCCHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TTLSHFTLPGDSVMMQKDFLFGVATASFQIEGDAEHRQPCIWDTFCDTPGKIADGSNGQ
CCCCEEECCCCCEEEEHHHEEEEEEEEEEECCCCCCCCCCEEHHHCCCCCCCCCCCCCC
VACDHVKLWRDDVDLIASLGVDAYRLSISWGRVLHPDGSVNQRGMDFYINLLDELGRRGI
EEEHHHHHHHHHHHHHHHCCCCEEEEEEECCEEECCCCCCCCCCHHHHHHHHHHHCCCCC
NVFVTLYHWDLPQHLEDKGGWLNRDTAVAFANYAAIVANALGNRVYAYSTLNEPFCSAFL
EEEEEEEECCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEEECCCCHHHHHHH
GYEAGIHAPGHKSRQQGRTAAHNLLLAHGMAMTEIRREAPEAKAGIVLNFSPAYPYTSSA
CCCCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCEEEEECCCCCCCCCC
GDANAARLAHEYHNTWYLMPLMEGRYPDIINQLEPHERPVVEPGDMDIISTPIDYLGINY
CCCHHHHHHHHHCCEEEEEEECCCCCHHHHHHCCCCCCCCCCCCCCCEECCCHHHHCCCC
YTRNVYRAGGPLGFEEVRIDNVPRTAMDWEICPQAFTDLLTGLAQEFNLPPIYITENGAA
EECEEEECCCCCCHHHEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCC
EDDAPFNGTVHDPMRLDYLQSHLLAVHQAIERGVDIKGYFAWSLMDNFEWAEGYRKRFGL
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEHHCCCHHHHHHHHHCCE
VYVDYGTQQRILKSSAKAYQGMLAIRQEASQQ
EEEECCCHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8277941 [H]