| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is 119774522
Identifier: 119774522
GI number: 119774522
Start: 1676878
End: 1677390
Strand: Reverse
Name: 119774522
Synonym: Sama_1385
Alternate gene names: NA
Gene position: 1677390-1676878 (Counterclockwise)
Preceding gene: 119774525
Following gene: 119774521
Centisome position: 38.95
GC content: 54.97
Gene sequence:
>513_bases ATGATCCGGCTGGAAAAGATGACTGCGTCAACTCGCCCCCTCGCCGAAGCGCTTGAAGTGGCACCGGAACAATTGCGCTT TGTAGGTACCATGGACGAAATCCTTGCCACCGCTGGTGGCGCCATAGTGCCTGTGTTGGTGTGGCACAGAGCTTCCTCTG CTACGACTGATATCGCCGACCTAAACAGCGGCGAACATCTGGTCGGCTTTTTTCTGCTGGACAAGGAATACAGCTGCGAG CATGACTTCGCCGAGGCCTCCGACTTGGGTTTCAGGGCATTTCTGATTGATGTGCACCATCAGGGTAAAGGCCTTGCCAG GGCCGTGATGCAGGCGCTGCCACAATTTGTAAAAGTGCGCTATCCGCAGTTCCGCCGCCTGGTGCTGACAGTCAATCTTA AAAATACCCCGGCGCAGGATCTCTATCTAAAAAACGGTTTTAGCGACAGCGAAAACCAGTATTTGGGCGGCAGCGCCGGG CCTCAGCACATCCTGTACTTGAAGCTCGACTGA
Upstream 100 bases:
>100_bases TAAAGCGCGGTACTATAACACCCCTGCGTGAATTATCAACCGACTTGCCCAAGAGCGCCAAAAACCGCCACTATAAGGCA GCAGAAAAAAGGAGAAGCGA
Downstream 100 bases:
>100_bases AAAAGGCGCCATGAGCCAGATCGCCAAATCATGTGCCAGCGTCTTGGCAAGACCGTTTATCACAAGGATTGTTTATGACA AAACTCCCCCATACCACCGC
Product: hypothetical protein
Products: NA
Alternate protein names: Acetyltransferase GNAT Family; GCN5-Like N-Acetyltransferase; Histone Acetyltransferase HPA2-Like Acetyltransferase; YbbJ Protein; Acetyltransferase
Number of amino acids: Translated: 170; Mature: 170
Protein sequence:
>170_residues MIRLEKMTASTRPLAEALEVAPEQLRFVGTMDEILATAGGAIVPVLVWHRASSATTDIADLNSGEHLVGFFLLDKEYSCE HDFAEASDLGFRAFLIDVHHQGKGLARAVMQALPQFVKVRYPQFRRLVLTVNLKNTPAQDLYLKNGFSDSENQYLGGSAG PQHILYLKLD
Sequences:
>Translated_170_residues MIRLEKMTASTRPLAEALEVAPEQLRFVGTMDEILATAGGAIVPVLVWHRASSATTDIADLNSGEHLVGFFLLDKEYSCE HDFAEASDLGFRAFLIDVHHQGKGLARAVMQALPQFVKVRYPQFRRLVLTVNLKNTPAQDLYLKNGFSDSENQYLGGSAG PQHILYLKLD >Mature_170_residues MIRLEKMTASTRPLAEALEVAPEQLRFVGTMDEILATAGGAIVPVLVWHRASSATTDIADLNSGEHLVGFFLLDKEYSCE HDFAEASDLGFRAFLIDVHHQGKGLARAVMQALPQFVKVRYPQFRRLVLTVNLKNTPAQDLYLKNGFSDSENQYLGGSAG PQHILYLKLD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18844; Mature: 18844
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRLEKMTASTRPLAEALEVAPEQLRFVGTMDEILATAGGAIVPVLVWHRASSATTDIAD CEEECCCCCCCCHHHHHHHHCHHHHHHHCCHHHHHHHCCCCEEEHEEEECCCCCCCCHHH LNSGEHLVGFFLLDKEYSCEHDFAEASDLGFRAFLIDVHHQGKGLARAVMQALPQFVKVR CCCCCEEEEEEEECCCCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHCC YPQFRRLVLTVNLKNTPAQDLYLKNGFSDSENQYLGGSAGPQHILYLKLD CCCCEEEEEEEEECCCCCCCEEEECCCCCCCCCCCCCCCCCCEEEEEEEC >Mature Secondary Structure MIRLEKMTASTRPLAEALEVAPEQLRFVGTMDEILATAGGAIVPVLVWHRASSATTDIAD CEEECCCCCCCCHHHHHHHHCHHHHHHHCCHHHHHHHCCCCEEEHEEEECCCCCCCCHHH LNSGEHLVGFFLLDKEYSCEHDFAEASDLGFRAFLIDVHHQGKGLARAVMQALPQFVKVR CCCCCEEEEEEEECCCCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHCC YPQFRRLVLTVNLKNTPAQDLYLKNGFSDSENQYLGGSAGPQHILYLKLD CCCCEEEEEEEEECCCCCCCEEEECCCCCCCCCCCCCCCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA