Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119774522

Identifier: 119774522

GI number: 119774522

Start: 1676878

End: 1677390

Strand: Reverse

Name: 119774522

Synonym: Sama_1385

Alternate gene names: NA

Gene position: 1677390-1676878 (Counterclockwise)

Preceding gene: 119774525

Following gene: 119774521

Centisome position: 38.95

GC content: 54.97

Gene sequence:

>513_bases
ATGATCCGGCTGGAAAAGATGACTGCGTCAACTCGCCCCCTCGCCGAAGCGCTTGAAGTGGCACCGGAACAATTGCGCTT
TGTAGGTACCATGGACGAAATCCTTGCCACCGCTGGTGGCGCCATAGTGCCTGTGTTGGTGTGGCACAGAGCTTCCTCTG
CTACGACTGATATCGCCGACCTAAACAGCGGCGAACATCTGGTCGGCTTTTTTCTGCTGGACAAGGAATACAGCTGCGAG
CATGACTTCGCCGAGGCCTCCGACTTGGGTTTCAGGGCATTTCTGATTGATGTGCACCATCAGGGTAAAGGCCTTGCCAG
GGCCGTGATGCAGGCGCTGCCACAATTTGTAAAAGTGCGCTATCCGCAGTTCCGCCGCCTGGTGCTGACAGTCAATCTTA
AAAATACCCCGGCGCAGGATCTCTATCTAAAAAACGGTTTTAGCGACAGCGAAAACCAGTATTTGGGCGGCAGCGCCGGG
CCTCAGCACATCCTGTACTTGAAGCTCGACTGA

Upstream 100 bases:

>100_bases
TAAAGCGCGGTACTATAACACCCCTGCGTGAATTATCAACCGACTTGCCCAAGAGCGCCAAAAACCGCCACTATAAGGCA
GCAGAAAAAAGGAGAAGCGA

Downstream 100 bases:

>100_bases
AAAAGGCGCCATGAGCCAGATCGCCAAATCATGTGCCAGCGTCTTGGCAAGACCGTTTATCACAAGGATTGTTTATGACA
AAACTCCCCCATACCACCGC

Product: hypothetical protein

Products: NA

Alternate protein names: Acetyltransferase GNAT Family; GCN5-Like N-Acetyltransferase; Histone Acetyltransferase HPA2-Like Acetyltransferase; YbbJ Protein; Acetyltransferase

Number of amino acids: Translated: 170; Mature: 170

Protein sequence:

>170_residues
MIRLEKMTASTRPLAEALEVAPEQLRFVGTMDEILATAGGAIVPVLVWHRASSATTDIADLNSGEHLVGFFLLDKEYSCE
HDFAEASDLGFRAFLIDVHHQGKGLARAVMQALPQFVKVRYPQFRRLVLTVNLKNTPAQDLYLKNGFSDSENQYLGGSAG
PQHILYLKLD

Sequences:

>Translated_170_residues
MIRLEKMTASTRPLAEALEVAPEQLRFVGTMDEILATAGGAIVPVLVWHRASSATTDIADLNSGEHLVGFFLLDKEYSCE
HDFAEASDLGFRAFLIDVHHQGKGLARAVMQALPQFVKVRYPQFRRLVLTVNLKNTPAQDLYLKNGFSDSENQYLGGSAG
PQHILYLKLD
>Mature_170_residues
MIRLEKMTASTRPLAEALEVAPEQLRFVGTMDEILATAGGAIVPVLVWHRASSATTDIADLNSGEHLVGFFLLDKEYSCE
HDFAEASDLGFRAFLIDVHHQGKGLARAVMQALPQFVKVRYPQFRRLVLTVNLKNTPAQDLYLKNGFSDSENQYLGGSAG
PQHILYLKLD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18844; Mature: 18844

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRLEKMTASTRPLAEALEVAPEQLRFVGTMDEILATAGGAIVPVLVWHRASSATTDIAD
CEEECCCCCCCCHHHHHHHHCHHHHHHHCCHHHHHHHCCCCEEEHEEEECCCCCCCCHHH
LNSGEHLVGFFLLDKEYSCEHDFAEASDLGFRAFLIDVHHQGKGLARAVMQALPQFVKVR
CCCCCEEEEEEEECCCCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHCC
YPQFRRLVLTVNLKNTPAQDLYLKNGFSDSENQYLGGSAGPQHILYLKLD
CCCCEEEEEEEEECCCCCCCEEEECCCCCCCCCCCCCCCCCCEEEEEEEC
>Mature Secondary Structure
MIRLEKMTASTRPLAEALEVAPEQLRFVGTMDEILATAGGAIVPVLVWHRASSATTDIAD
CEEECCCCCCCCHHHHHHHHCHHHHHHHCCHHHHHHHCCCCEEEHEEEECCCCCCCCHHH
LNSGEHLVGFFLLDKEYSCEHDFAEASDLGFRAFLIDVHHQGKGLARAVMQALPQFVKVR
CCCCCEEEEEEEECCCCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHCC
YPQFRRLVLTVNLKNTPAQDLYLKNGFSDSENQYLGGSAGPQHILYLKLD
CCCCEEEEEEEEECCCCCCCEEEECCCCCCCCCCCCCCCCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA