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The map label for this gene is yeeY [H]

Identifier: 119774525

GI number: 119774525

Start: 1679815

End: 1680708

Strand: Reverse

Name: yeeY [H]

Synonym: Sama_1388

Alternate gene names: 119774525

Gene position: 1680708-1679815 (Counterclockwise)

Preceding gene: 119774530

Following gene: 119774522

Centisome position: 39.03

GC content: 58.39

Gene sequence:

>894_bases
ATGGCAAACACACTGGATCTGGACGGGCTAAGAGCTCTGGATGCAATTGATAAAAAAGGAAGTTTTGCTGCAGCTGCCGA
ATCGCTTCATAAGGTGCCTTCGGCCCTCACCTACACAATTCAAAAGCTGGAACAGGAATTTGGCACCCCTTTGTTCGACA
GGTCAAAACAAAGGGCCAGATTAACGGCCGCGGGCAGACTGGTGCTTGAGCAAGGGCGGGAAATTTTGCAATCCACCCAG
CGCCTCGCCGATGCAGTTGCCGCGCTGGAGTCAGGTTGGGAGCGAGAGCTGCGCATCGCAAGGGACACGGCCATGCCGCC
GGGCCCACTGCTGGAGGCATTAACCGCGTTTCTGGCCCTGTCGGTACCAGTGGACATCAGCCTTGCGGAAGAATCGCTCG
GTGGCGGCTGGGATGCGCTGCACAGCCGCCGTGCCGATTTGGTGATTGGCGCCAACGGCGACCTGCCTCGGGGGCTATTT
GAAACCCATTGCATTGGTCAGCTCGAGTTTGTGTTTGCCCTGGCGCCCTTTCATCCGCTGGCAGAGGCTGAGGGCGTGCT
GCAGCTGGAACAGCTAATGCCCTTCCCTTCGGTGGTGGTGTCTGACAGCTCGCAGCTGTTACCGGCCAGGAGCAGCGGCC
TTTTCAGCAGTCGCCAGACCCTGAGAGTCGCGTCAATGGAAGCAAAAATTGAATTGCAGTGCCGCGGACTGGGCACCGGC
TTTATTCCGCGCCATCTGGCGGCACCGCTTATTGCCAGCGACGCGCTGGTGGAAAAAGCCTGCGCCCTGCCGAGGCCAAG
CCAGCCGGTGTTTCTGGCCTGGCATAAAGAGCATCAGGGCAAGGCATTAGCCTGGTTTGTGGCACATTTATGTAAGGCCG
ATTGGGGTATATAA

Upstream 100 bases:

>100_bases
CACTCAGCCTTGATTGAATTTTAGTTTATGGCGATAGACTCACAGAAAAAATCGGAATGTTTCGATATAATTATTCAAAA
TTATTGAACATTAAGAGTTT

Downstream 100 bases:

>100_bases
GCCACCATCAGTCGCAAATACACATGACTGGCACCATACGCAGTCCCAATGAAGTGAACCAGACCAGTCAGGGTTTTGGA
GAACACACCTTATTTCATTG

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 297; Mature: 296

Protein sequence:

>297_residues
MANTLDLDGLRALDAIDKKGSFAAAAESLHKVPSALTYTIQKLEQEFGTPLFDRSKQRARLTAAGRLVLEQGREILQSTQ
RLADAVAALESGWERELRIARDTAMPPGPLLEALTAFLALSVPVDISLAEESLGGGWDALHSRRADLVIGANGDLPRGLF
ETHCIGQLEFVFALAPFHPLAEAEGVLQLEQLMPFPSVVVSDSSQLLPARSSGLFSSRQTLRVASMEAKIELQCRGLGTG
FIPRHLAAPLIASDALVEKACALPRPSQPVFLAWHKEHQGKALAWFVAHLCKADWGI

Sequences:

>Translated_297_residues
MANTLDLDGLRALDAIDKKGSFAAAAESLHKVPSALTYTIQKLEQEFGTPLFDRSKQRARLTAAGRLVLEQGREILQSTQ
RLADAVAALESGWERELRIARDTAMPPGPLLEALTAFLALSVPVDISLAEESLGGGWDALHSRRADLVIGANGDLPRGLF
ETHCIGQLEFVFALAPFHPLAEAEGVLQLEQLMPFPSVVVSDSSQLLPARSSGLFSSRQTLRVASMEAKIELQCRGLGTG
FIPRHLAAPLIASDALVEKACALPRPSQPVFLAWHKEHQGKALAWFVAHLCKADWGI
>Mature_296_residues
ANTLDLDGLRALDAIDKKGSFAAAAESLHKVPSALTYTIQKLEQEFGTPLFDRSKQRARLTAAGRLVLEQGREILQSTQR
LADAVAALESGWERELRIARDTAMPPGPLLEALTAFLALSVPVDISLAEESLGGGWDALHSRRADLVIGANGDLPRGLFE
THCIGQLEFVFALAPFHPLAEAEGVLQLEQLMPFPSVVVSDSSQLLPARSSGLFSSRQTLRVASMEAKIELQCRGLGTGF
IPRHLAAPLIASDALVEKACALPRPSQPVFLAWHKEHQGKALAWFVAHLCKADWGI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082024, Length=281, Percent_Identity=38.7900355871886, Blast_Score=197, Evalue=6e-52,
Organism=Escherichia coli, GI1787949, Length=282, Percent_Identity=31.9148936170213, Blast_Score=159, Evalue=3e-40,
Organism=Escherichia coli, GI1789492, Length=293, Percent_Identity=32.4232081911263, Blast_Score=150, Evalue=7e-38,
Organism=Escherichia coli, GI1786713, Length=281, Percent_Identity=31.3167259786477, Blast_Score=134, Evalue=8e-33,
Organism=Escherichia coli, GI1786508, Length=288, Percent_Identity=26.3888888888889, Blast_Score=115, Evalue=3e-27,
Organism=Escherichia coli, GI1790262, Length=227, Percent_Identity=27.3127753303965, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 32124; Mature: 31993

Theoretical pI: Translated: 6.31; Mature: 6.31

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANTLDLDGLRALDAIDKKGSFAAAAESLHKVPSALTYTIQKLEQEFGTPLFDRSKQRAR
CCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHH
LTAAGRLVLEQGREILQSTQRLADAVAALESGWERELRIARDTAMPPGPLLEALTAFLAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHH
SVPVDISLAEESLGGGWDALHSRRADLVIGANGDLPRGLFETHCIGQLEFVFALAPFHPL
HCCCCEEEHHHHCCCCHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCH
AEAEGVLQLEQLMPFPSVVVSDSSQLLPARSSGLFSSRQTLRVASMEAKIELQCRGLGTG
HHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCHHCHHHHHHEEECEEEEEEEECCCCC
FIPRHLAAPLIASDALVEKACALPRPSQPVFLAWHKEHQGKALAWFVAHLCKADWGI
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
ANTLDLDGLRALDAIDKKGSFAAAAESLHKVPSALTYTIQKLEQEFGTPLFDRSKQRAR
CCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHH
LTAAGRLVLEQGREILQSTQRLADAVAALESGWERELRIARDTAMPPGPLLEALTAFLAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHH
SVPVDISLAEESLGGGWDALHSRRADLVIGANGDLPRGLFETHCIGQLEFVFALAPFHPL
HCCCCEEEHHHHCCCCHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCH
AEAEGVLQLEQLMPFPSVVVSDSSQLLPARSSGLFSSRQTLRVASMEAKIELQCRGLGTG
HHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCHHCHHHHHHEEECEEEEEEEECCCCC
FIPRHLAAPLIASDALVEKACALPRPSQPVFLAWHKEHQGKALAWFVAHLCKADWGI
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503 [H]