| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is vat [H]
Identifier: 119774521
GI number: 119774521
Start: 1676123
End: 1676803
Strand: Reverse
Name: vat [H]
Synonym: Sama_1384
Alternate gene names: 119774521
Gene position: 1676803-1676123 (Counterclockwise)
Preceding gene: 119774522
Following gene: 119774509
Centisome position: 38.94
GC content: 54.04
Gene sequence:
>681_bases ATGACAAAACTCCCCCATACCACCGCCCATACCCAAGCGAAAACACAACCCGGCCCCAGCCCCGATAATCCATTCCCCAT GGAAGGCTTCCCGCAGGTGTGCTTTATCAAAAACACCATCAGCAATCCCAACATTCAGGTGGGCGATTACAGCTATTACG ACGACCCAGAGGACAGTGCCAACTTTGAGCACAACGTGCTGTATCACTTCCCCTTTATTGGCGACAAGCTGATTATCGGT AAATTCTGCGCCATCGCCCGCGGGGTCAGGTTCATCATGAATGGTGCCAACCATCCCATGGCTGGCGTGAGCACCTATCC GTTTTTTATTTTTGGCAACGGCTGGGAGCAAGCGGCGCCTGAGCCGGGGGAATTACCCTATAAAGGCGATACCGAAATCG GCAACGATGTGTGGATAGGCTATGAGGCCCTGATTATGCCCGGGGTAAAGGTGGGCAATGGCGCCATTATCGCCAGCCGC GCTGTGGTCACCACTGACGTACCTGCCTACGCCATCGTTGGTGGCAACCCAGCCAAGGTGATGAAAATGCGCTTTGATGA GAAAGACATCGCCCTGCTTGAAGCCATCGCCTGGTGGGATTGGCCGGTAGCGAAAATTACCGCCCACCTGCTCGATATCA AAAGTGGTAATCTTGAAGCCCTGAAGCAGGCACAACCGTAA
Upstream 100 bases:
>100_bases ACATCCTGTACTTGAAGCTCGACTGAAAAAGGCGCCATGAGCCAGATCGCCAAATCATGTGCCAGCGTCTTGGCAAGACC GTTTATCACAAGGATTGTTT
Downstream 100 bases:
>100_bases TCACCTGGCCATGTTGAAACACCCGACCGGGGAAACTGTCCCTAAAACCGCATCGTTATTGTTTCTGGCTTTATTTGCGG CTTTATTTGCGACTTTATTT
Product: streptogramin A acetyl transferase
Products: CoA; acetylmaltose [C]
Alternate protein names: NA
Number of amino acids: Translated: 226; Mature: 225
Protein sequence:
>226_residues MTKLPHTTAHTQAKTQPGPSPDNPFPMEGFPQVCFIKNTISNPNIQVGDYSYYDDPEDSANFEHNVLYHFPFIGDKLIIG KFCAIARGVRFIMNGANHPMAGVSTYPFFIFGNGWEQAAPEPGELPYKGDTEIGNDVWIGYEALIMPGVKVGNGAIIASR AVVTTDVPAYAIVGGNPAKVMKMRFDEKDIALLEAIAWWDWPVAKITAHLLDIKSGNLEALKQAQP
Sequences:
>Translated_226_residues MTKLPHTTAHTQAKTQPGPSPDNPFPMEGFPQVCFIKNTISNPNIQVGDYSYYDDPEDSANFEHNVLYHFPFIGDKLIIG KFCAIARGVRFIMNGANHPMAGVSTYPFFIFGNGWEQAAPEPGELPYKGDTEIGNDVWIGYEALIMPGVKVGNGAIIASR AVVTTDVPAYAIVGGNPAKVMKMRFDEKDIALLEAIAWWDWPVAKITAHLLDIKSGNLEALKQAQP >Mature_225_residues TKLPHTTAHTQAKTQPGPSPDNPFPMEGFPQVCFIKNTISNPNIQVGDYSYYDDPEDSANFEHNVLYHFPFIGDKLIIGK FCAIARGVRFIMNGANHPMAGVSTYPFFIFGNGWEQAAPEPGELPYKGDTEIGNDVWIGYEALIMPGVKVGNGAIIASRA VVTTDVPAYAIVGGNPAKVMKMRFDEKDIALLEAIAWWDWPVAKITAHLLDIKSGNLEALKQAQP
Specific function: Inactivates the A compounds of virginiamycin-like antibiotics, thus providing resistance to these antibiotics [H]
COG id: COG0110
COG function: function code R; Acetyltransferase (isoleucine patch superfamily)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transferase hexapeptide repeat family [H]
Homologues:
Organism=Escherichia coli, GI1786664, Length=123, Percent_Identity=38.2113821138211, Blast_Score=66, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001451 - InterPro: IPR018357 - InterPro: IPR011004 [H]
Pfam domain/function: PF00132 Hexapep [H]
EC number: 2.3.1.79 [C]
Molecular weight: Translated: 24778; Mature: 24647
Theoretical pI: Translated: 5.24; Mature: 5.24
Prosite motif: PS00101 HEXAPEP_TRANSFERASES
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKLPHTTAHTQAKTQPGPSPDNPFPMEGFPQVCFIKNTISNPNIQVGDYSYYDDPEDSA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEECCCCCCCCCCCCC NFEHNVLYHFPFIGDKLIIGKFCAIARGVRFIMNGANHPMAGVSTYPFFIFGNGWEQAAP CCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCHHHCCC EPGELPYKGDTEIGNDVWIGYEALIMPGVKVGNGAIIASRAVVTTDVPAYAIVGGNPAKV CCCCCCCCCCCCCCCEEEECEEEEEECCEEECCCEEEEECEEEEECCCEEEEECCCHHHE MKMRFDEKDIALLEAIAWWDWPVAKITAHLLDIKSGNLEALKQAQP EEEECCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHCCCC >Mature Secondary Structure TKLPHTTAHTQAKTQPGPSPDNPFPMEGFPQVCFIKNTISNPNIQVGDYSYYDDPEDSA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEECCCCCCCCCCCCC NFEHNVLYHFPFIGDKLIIGKFCAIARGVRFIMNGANHPMAGVSTYPFFIFGNGWEQAAP CCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCHHHCCC EPGELPYKGDTEIGNDVWIGYEALIMPGVKVGNGAIIASRAVVTTDVPAYAIVGGNPAKV CCCCCCCCCCCCCCCEEEECEEEEEECCEEECCCEEEEECEEEEECCCEEEEECCCHHHE MKMRFDEKDIALLEAIAWWDWPVAKITAHLLDIKSGNLEALKQAQP EEEECCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: 0.20 {glucose} 0.11 {maltose}
Km value (mM): 62 {glucose}} 90 {maltose}} 0.018 {acetyl-CoA}} 40 {triethanolamine}} [C]
Substrates: Acetyl-CoA; maltose [C]
Specific reaction: Acetyl-CoA + maltose = CoA + acetylmaltose [C]
General reaction: Acyl group transfer [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8344533; 3149758 [H]