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The map label for this gene is 119774328

Identifier: 119774328

GI number: 119774328

Start: 1458845

End: 1459552

Strand: Direct

Name: 119774328

Synonym: Sama_1191

Alternate gene names: NA

Gene position: 1458845-1459552 (Clockwise)

Preceding gene: 119774327

Following gene: 119774330

Centisome position: 33.88

GC content: 57.06

Gene sequence:

>708_bases
ATGCGCCGCGCAGACAGACTGTTTCAAATCGTACAAATCTTAAGGCACAGACGCCTGACAACGGCGGCGCAGCTTGCCGA
GCGCCTGGCTGTGTCCCAGCGCACCATCTACCGGGATATTCAGGACCTTTGCCTTTCAGGCATTCCCATCGAAGGGGAAG
CTGGCGTTGGCTATTTGCTGCGTCAGGAGGTCAATGTGCCACCACTGATGTTCAACGAAGTCGAGCTCGAAGCGATTCAG
GTGGGCATTCGCATGGTGCAAACCTGGGGCGGCAAGGCCCTTGGGCAAGCCGCTGCTCAGGCGCTTATCAAGGTCGAAGC
CGTGCTGCCAAACCGCCTTAAAGACATGCAGTCTCTCATGTTTTCACCCGACTTTTATCTCGATGATGCTGAGTTTCAAT
TTCTGGACCCGCTCAGAATTGCGGCCAGGGAGCGGCGGTATTGCCAGATTTGTTATCGGGATGCCAAGGAAGACGTGACA
GAGCGACGCCTCCGGCCGCTGGCGATTTATTTCTGGCGTGGTACCTGGACCCTGCTGGGGTGGTGTGAGCTTCGGGGGGA
TTTTCGAAGCTTTCGCGCCGACCGTATTGTGAGTCTTGAGTGCGAAAGCGAACAGTTTGCCCATACTCCGGGGCAGGAGC
TGGCGGATTTTGTGGCGCGCATGGATGAGGCCAGCCGCGAATACGAAAAGGCCCCAAAGGCCGATTGA

Upstream 100 bases:

>100_bases
GGGCTGGGTATAAAGCCATGGGTATTGCGATACTGAGCCGCCAATAACAGAAAATACCGGGCCGGGCGCATTGGCGTACC
GGCCCTTACATGGATAGGGT

Downstream 100 bases:

>100_bases
AACACATAAAAAAATGGCGGCCGGGGCCGCCATTTTTACGCTGTTGGGGTTAGAAACTGCCCCTGACACCGAAGGCAATC
TGTGTACCGAAGCGCTCCAG

Product: hypothetical protein

Products: NA

Alternate protein names: Transcriptional Regulator; DeoR Family Transcriptional Regulator; DeoR-Family Transcriptional Regulator; Helix-Turn-Helix Domain Containing Protein Type; HTH Domain Family; Transcription Regulator Protein; NB-Dependent Receptor; Repressor Transcription Regulator Protein; Transcriptional Regulator Protein; Regulatory Protein; Bacterial Regulatory Protein DeoR Family; HTH Domain-Containing Protein; Regulatory Protein DeoR; DeoR Family Transriptional Regulator; Transcription Regulator Protein DeoR Family; DeoR-Like Helix-Turn-Helix Domain Protein; Transriptional Regulator DeoR Family; DeoR-Family Protein Transcriptional Regulator; HTH Domain-Containing; Regulatory Protein Deor; Transcription Regulator; LOW QUALITY PROTEIN Helix-Turn-Helix Type; Helix-Turn-Helix Domain-Containing Protein; HTH Domain Protein; Transcriptional Regulator-Like

Number of amino acids: Translated: 235; Mature: 235

Protein sequence:

>235_residues
MRRADRLFQIVQILRHRRLTTAAQLAERLAVSQRTIYRDIQDLCLSGIPIEGEAGVGYLLRQEVNVPPLMFNEVELEAIQ
VGIRMVQTWGGKALGQAAAQALIKVEAVLPNRLKDMQSLMFSPDFYLDDAEFQFLDPLRIAARERRYCQICYRDAKEDVT
ERRLRPLAIYFWRGTWTLLGWCELRGDFRSFRADRIVSLECESEQFAHTPGQELADFVARMDEASREYEKAPKAD

Sequences:

>Translated_235_residues
MRRADRLFQIVQILRHRRLTTAAQLAERLAVSQRTIYRDIQDLCLSGIPIEGEAGVGYLLRQEVNVPPLMFNEVELEAIQ
VGIRMVQTWGGKALGQAAAQALIKVEAVLPNRLKDMQSLMFSPDFYLDDAEFQFLDPLRIAARERRYCQICYRDAKEDVT
ERRLRPLAIYFWRGTWTLLGWCELRGDFRSFRADRIVSLECESEQFAHTPGQELADFVARMDEASREYEKAPKAD
>Mature_235_residues
MRRADRLFQIVQILRHRRLTTAAQLAERLAVSQRTIYRDIQDLCLSGIPIEGEAGVGYLLRQEVNVPPLMFNEVELEAIQ
VGIRMVQTWGGKALGQAAAQALIKVEAVLPNRLKDMQSLMFSPDFYLDDAEFQFLDPLRIAARERRYCQICYRDAKEDVT
ERRLRPLAIYFWRGTWTLLGWCELRGDFRSFRADRIVSLECESEQFAHTPGQELADFVARMDEASREYEKAPKAD

Specific function: Unknown

COG id: COG2378

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27204; Mature: 27204

Theoretical pI: Translated: 5.93; Mature: 5.93

Prosite motif: PS51000 HTH_DEOR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRADRLFQIVQILRHRRLTTAAQLAERLAVSQRTIYRDIQDLCLSGIPIEGEAGVGYLL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHH
RQEVNVPPLMFNEVELEAIQVGIRMVQTWGGKALGQAAAQALIKVEAVLPNRLKDMQSLM
HHCCCCCCEEECHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FSPDFYLDDAEFQFLDPLRIAARERRYCQICYRDAKEDVTERRLRPLAIYFWRGTWTLLG
CCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHH
WCELRGDFRSFRADRIVSLECESEQFAHTPGQELADFVARMDEASREYEKAPKAD
HHHHHHHHHHHCCCCEEEEEECCHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MRRADRLFQIVQILRHRRLTTAAQLAERLAVSQRTIYRDIQDLCLSGIPIEGEAGVGYLL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHH
RQEVNVPPLMFNEVELEAIQVGIRMVQTWGGKALGQAAAQALIKVEAVLPNRLKDMQSLM
HHCCCCCCEEECHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FSPDFYLDDAEFQFLDPLRIAARERRYCQICYRDAKEDVTERRLRPLAIYFWRGTWTLLG
CCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHH
WCELRGDFRSFRADRIVSLECESEQFAHTPGQELADFVARMDEASREYEKAPKAD
HHHHHHHHHHHCCCCEEEEEECCHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA