| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is 119774327
Identifier: 119774327
GI number: 119774327
Start: 1458359
End: 1458742
Strand: Direct
Name: 119774327
Synonym: Sama_1190
Alternate gene names: NA
Gene position: 1458359-1458742 (Clockwise)
Preceding gene: 119774326
Following gene: 119774328
Centisome position: 33.87
GC content: 55.99
Gene sequence:
>384_bases ATGCAAGCAACTCAACCTCTGGTATGGGGCGAAATCGCTGTCACTGATATGGCCAGAGCCATCGCCTTCTACCAAGCCCA GTTTGACGTGAGTTTTCGCCGGGAAGACATGGATGAGGTGGAATACGCCATCCTCGAATGCAGTGATGAGAAGGCGGCCA CCATCGGATTGATGAAACACCCCGAGTTCAAGCCAGGCCAGGGCGGCGCCTGTCTGTACCTGCATCTGACGGATAACTTG GGTCAGCTTGTGGGTAAACTGGAGCACAACCAGGTGCAAATTGTCATGCCTCCCATGGGCATCAAGGGCGGTGAATGTGG CTACATAGCCCTGTTTGTCGACAGCGAAGGCAACACAGTCGGCCTGTGGAGCCCGGCGCTCTGA
Upstream 100 bases:
>100_bases GTCAGCAGGGGGGGATTAAGCTGACTCTATCGATGAAGCGCGAAGTAATACCTACTTCAAGGCATTGATATATAAAGTTT AGTCACAAGGAGATAAGGAT
Downstream 100 bases:
>100_bases CGGGGCTGGGTATAAAGCCATGGGTATTGCGATACTGAGCCGCCAATAACAGAAAATACCGGGCCGGGCGCATTGGCGTA CCGGCCCTTACATGGATAGG
Product: glyoxalase family protein
Products: NA
Alternate protein names: Glyoxalase/Bleomycin Resistance Protein/Dioxygenase; Glyoxalase; Lipoprotein
Number of amino acids: Translated: 127; Mature: 127
Protein sequence:
>127_residues MQATQPLVWGEIAVTDMARAIAFYQAQFDVSFRREDMDEVEYAILECSDEKAATIGLMKHPEFKPGQGGACLYLHLTDNL GQLVGKLEHNQVQIVMPPMGIKGGECGYIALFVDSEGNTVGLWSPAL
Sequences:
>Translated_127_residues MQATQPLVWGEIAVTDMARAIAFYQAQFDVSFRREDMDEVEYAILECSDEKAATIGLMKHPEFKPGQGGACLYLHLTDNL GQLVGKLEHNQVQIVMPPMGIKGGECGYIALFVDSEGNTVGLWSPAL >Mature_127_residues MQATQPLVWGEIAVTDMARAIAFYQAQFDVSFRREDMDEVEYAILECSDEKAATIGLMKHPEFKPGQGGACLYLHLTDNL GQLVGKLEHNQVQIVMPPMGIKGGECGYIALFVDSEGNTVGLWSPAL
Specific function: Unknown
COG id: COG3324
COG function: function code R; Predicted enzyme related to lactoylglutathione lyase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13934; Mature: 13934
Theoretical pI: Translated: 4.30; Mature: 4.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 7.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQATQPLVWGEIAVTDMARAIAFYQAQFDVSFRREDMDEVEYAILECSDEKAATIGLMKH CCCCCCEEECHHHHHHHHHHHHHHHEEECEEECCCCHHHHEEEEEECCCCCCEEEEEEEC PEFKPGQGGACLYLHLTDNLGQLVGKLEHNQVQIVMPPMGIKGGECGYIALFVDSEGNTV CCCCCCCCCEEEEEEECCCHHHHHHCCCCCEEEEEECCCCCCCCCCCEEEEEEECCCCEE GLWSPAL EEECCCC >Mature Secondary Structure MQATQPLVWGEIAVTDMARAIAFYQAQFDVSFRREDMDEVEYAILECSDEKAATIGLMKH CCCCCCEEECHHHHHHHHHHHHHHHEEECEEECCCCHHHHEEEEEECCCCCCEEEEEEEC PEFKPGQGGACLYLHLTDNLGQLVGKLEHNQVQIVMPPMGIKGGECGYIALFVDSEGNTV CCCCCCCCCEEEEEEECCCHHHHHHCCCCCEEEEEECCCCCCCCCCCEEEEEEECCCCEE GLWSPAL EEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA