Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119774327

Identifier: 119774327

GI number: 119774327

Start: 1458359

End: 1458742

Strand: Direct

Name: 119774327

Synonym: Sama_1190

Alternate gene names: NA

Gene position: 1458359-1458742 (Clockwise)

Preceding gene: 119774326

Following gene: 119774328

Centisome position: 33.87

GC content: 55.99

Gene sequence:

>384_bases
ATGCAAGCAACTCAACCTCTGGTATGGGGCGAAATCGCTGTCACTGATATGGCCAGAGCCATCGCCTTCTACCAAGCCCA
GTTTGACGTGAGTTTTCGCCGGGAAGACATGGATGAGGTGGAATACGCCATCCTCGAATGCAGTGATGAGAAGGCGGCCA
CCATCGGATTGATGAAACACCCCGAGTTCAAGCCAGGCCAGGGCGGCGCCTGTCTGTACCTGCATCTGACGGATAACTTG
GGTCAGCTTGTGGGTAAACTGGAGCACAACCAGGTGCAAATTGTCATGCCTCCCATGGGCATCAAGGGCGGTGAATGTGG
CTACATAGCCCTGTTTGTCGACAGCGAAGGCAACACAGTCGGCCTGTGGAGCCCGGCGCTCTGA

Upstream 100 bases:

>100_bases
GTCAGCAGGGGGGGATTAAGCTGACTCTATCGATGAAGCGCGAAGTAATACCTACTTCAAGGCATTGATATATAAAGTTT
AGTCACAAGGAGATAAGGAT

Downstream 100 bases:

>100_bases
CGGGGCTGGGTATAAAGCCATGGGTATTGCGATACTGAGCCGCCAATAACAGAAAATACCGGGCCGGGCGCATTGGCGTA
CCGGCCCTTACATGGATAGG

Product: glyoxalase family protein

Products: NA

Alternate protein names: Glyoxalase/Bleomycin Resistance Protein/Dioxygenase; Glyoxalase; Lipoprotein

Number of amino acids: Translated: 127; Mature: 127

Protein sequence:

>127_residues
MQATQPLVWGEIAVTDMARAIAFYQAQFDVSFRREDMDEVEYAILECSDEKAATIGLMKHPEFKPGQGGACLYLHLTDNL
GQLVGKLEHNQVQIVMPPMGIKGGECGYIALFVDSEGNTVGLWSPAL

Sequences:

>Translated_127_residues
MQATQPLVWGEIAVTDMARAIAFYQAQFDVSFRREDMDEVEYAILECSDEKAATIGLMKHPEFKPGQGGACLYLHLTDNL
GQLVGKLEHNQVQIVMPPMGIKGGECGYIALFVDSEGNTVGLWSPAL
>Mature_127_residues
MQATQPLVWGEIAVTDMARAIAFYQAQFDVSFRREDMDEVEYAILECSDEKAATIGLMKHPEFKPGQGGACLYLHLTDNL
GQLVGKLEHNQVQIVMPPMGIKGGECGYIALFVDSEGNTVGLWSPAL

Specific function: Unknown

COG id: COG3324

COG function: function code R; Predicted enzyme related to lactoylglutathione lyase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13934; Mature: 13934

Theoretical pI: Translated: 4.30; Mature: 4.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQATQPLVWGEIAVTDMARAIAFYQAQFDVSFRREDMDEVEYAILECSDEKAATIGLMKH
CCCCCCEEECHHHHHHHHHHHHHHHEEECEEECCCCHHHHEEEEEECCCCCCEEEEEEEC
PEFKPGQGGACLYLHLTDNLGQLVGKLEHNQVQIVMPPMGIKGGECGYIALFVDSEGNTV
CCCCCCCCCEEEEEEECCCHHHHHHCCCCCEEEEEECCCCCCCCCCCEEEEEEECCCCEE
GLWSPAL
EEECCCC
>Mature Secondary Structure
MQATQPLVWGEIAVTDMARAIAFYQAQFDVSFRREDMDEVEYAILECSDEKAATIGLMKH
CCCCCCEEECHHHHHHHHHHHHHHHEEECEEECCCCHHHHEEEEEECCCCCCEEEEEEEC
PEFKPGQGGACLYLHLTDNLGQLVGKLEHNQVQIVMPPMGIKGGECGYIALFVDSEGNTV
CCCCCCCCCEEEEEEECCCHHHHHHCCCCCEEEEEECCCCCCCCCCCEEEEEEECCCCEE
GLWSPAL
EEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA