| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is yfcG [H]
Identifier: 119774224
GI number: 119774224
Start: 1314986
End: 1315654
Strand: Reverse
Name: yfcG [H]
Synonym: Sama_1087
Alternate gene names: 119774224
Gene position: 1315654-1314986 (Counterclockwise)
Preceding gene: 119774225
Following gene: 119774223
Centisome position: 30.55
GC content: 55.46
Gene sequence:
>669_bases ATGATTGAGCTTTATACCGCCGCGACCCCCAACGGCCATAAAATTTCCATTGCCCTTGAAGAATTAGGGCTCGAGTATCG GGTACATGCCCTTGATCTCATGACCCTTGAGCAAAAAAAGCCCGAGTTTCTGGCCATTAACCCCAATGGCCGTATTCCGG CAATTGTAGACACAGATAACGACGACTTTGCGGTATTTGAGTCGGGTGCCATCTTGTTATATCTGGCCGAGAAAACCGGC AAGCTGCTGCCGACCGAGCCCAAGGCACGCTCTGAGGTTATCCAGTGGCTGATGTTCCAGATGGGGGGCGTTGGCCCCAT GATGGGTCAGGCGAACGTGTTTTACCGCTACTTTCCCGAAAAAATTCCGGCCGCCATTGAGCGTTATCAAAAGGAAGGAC GGCGCCTGTTCGAGGTGATGAATACCCAGCTTGAAAAGCATGCGTATCTCGCCGGAGACGAGTACAGCGTCGCCGATATC GCCACCTACCCCTGGGTACGTATCTATGACTGGAGCGGCGTGGATATCAGTGGGTTGGATGCGCTGCAGCACTGGCTCGA GCGCATCACTGCCCGGCCCGCCGTGGCCAAGGGCCTTGCTGTGCCGCCACCAAGTGAGAAATCCGCCGAAGAGCGTGCCA AAGACATCGCCAAAATGGTCACCCGCTGA
Upstream 100 bases:
>100_bases TGACCGACGCCATGCCCAACATTCGCCGCTGGCACGCAGCCATCGCCGCACGTCCCGCCGTGGCCACCCTGCTGGCAAGC CAGCAATAGAGGAGTACATC
Downstream 100 bases:
>100_bases CTCGCCGGTTACCAGCCATCCTCAGATGCGCCCTCGCGGCGCATCTGCTACAATCGGCGCCGGATTTTTTACTCAGGCAA GCCCATGTCACACCCAGCAC
Product: glutathione S-transferase family protein
Products: NA
Alternate protein names: GST-like protein yfcG [H]
Number of amino acids: Translated: 222; Mature: 222
Protein sequence:
>222_residues MIELYTAATPNGHKISIALEELGLEYRVHALDLMTLEQKKPEFLAINPNGRIPAIVDTDNDDFAVFESGAILLYLAEKTG KLLPTEPKARSEVIQWLMFQMGGVGPMMGQANVFYRYFPEKIPAAIERYQKEGRRLFEVMNTQLEKHAYLAGDEYSVADI ATYPWVRIYDWSGVDISGLDALQHWLERITARPAVAKGLAVPPPSEKSAEERAKDIAKMVTR
Sequences:
>Translated_222_residues MIELYTAATPNGHKISIALEELGLEYRVHALDLMTLEQKKPEFLAINPNGRIPAIVDTDNDDFAVFESGAILLYLAEKTG KLLPTEPKARSEVIQWLMFQMGGVGPMMGQANVFYRYFPEKIPAAIERYQKEGRRLFEVMNTQLEKHAYLAGDEYSVADI ATYPWVRIYDWSGVDISGLDALQHWLERITARPAVAKGLAVPPPSEKSAEERAKDIAKMVTR >Mature_222_residues MIELYTAATPNGHKISIALEELGLEYRVHALDLMTLEQKKPEFLAINPNGRIPAIVDTDNDDFAVFESGAILLYLAEKTG KLLPTEPKARSEVIQWLMFQMGGVGPMMGQANVFYRYFPEKIPAAIERYQKEGRRLFEVMNTQLEKHAYLAGDEYSVADI ATYPWVRIYDWSGVDISGLDALQHWLERITARPAVAKGLAVPPPSEKSAEERAKDIAKMVTR
Specific function: Has disulfide bond reductase activity (in vitro). Has low hydroperoxidase activity with cumene hydroperoxide. Has very low glutathione-S-transferase activity (in vitro) [H]
COG id: COG0625
COG function: function code O; Glutathione S-transferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 GST N-terminal domain [H]
Homologues:
Organism=Escherichia coli, GI1788640, Length=203, Percent_Identity=50.2463054187192, Blast_Score=204, Evalue=3e-54, Organism=Escherichia coli, GI87082195, Length=215, Percent_Identity=40.4651162790698, Blast_Score=152, Evalue=1e-38, Organism=Escherichia coli, GI87081789, Length=169, Percent_Identity=34.3195266272189, Blast_Score=84, Evalue=1e-17, Organism=Saccharomyces cerevisiae, GI6324100, Length=232, Percent_Identity=34.9137931034483, Blast_Score=133, Evalue=3e-32, Organism=Drosophila melanogaster, GI28571670, Length=171, Percent_Identity=36.8421052631579, Blast_Score=102, Evalue=2e-22, Organism=Drosophila melanogaster, GI85725204, Length=193, Percent_Identity=37.3056994818653, Blast_Score=96, Evalue=2e-20, Organism=Drosophila melanogaster, GI17737923, Length=193, Percent_Identity=37.3056994818653, Blast_Score=96, Evalue=2e-20, Organism=Drosophila melanogaster, GI17864592, Length=170, Percent_Identity=37.6470588235294, Blast_Score=94, Evalue=5e-20, Organism=Drosophila melanogaster, GI45549270, Length=188, Percent_Identity=32.4468085106383, Blast_Score=89, Evalue=2e-18, Organism=Drosophila melanogaster, GI17933730, Length=192, Percent_Identity=32.2916666666667, Blast_Score=89, Evalue=3e-18, Organism=Drosophila melanogaster, GI17864598, Length=187, Percent_Identity=33.1550802139037, Blast_Score=88, Evalue=5e-18, Organism=Drosophila melanogaster, GI24646249, Length=173, Percent_Identity=35.8381502890173, Blast_Score=85, Evalue=3e-17, Organism=Drosophila melanogaster, GI17864594, Length=184, Percent_Identity=33.1521739130435, Blast_Score=85, Evalue=3e-17, Organism=Drosophila melanogaster, GI17864596, Length=188, Percent_Identity=28.1914893617021, Blast_Score=77, Evalue=7e-15, Organism=Drosophila melanogaster, GI24646251, Length=188, Percent_Identity=31.9148936170213, Blast_Score=75, Evalue=3e-14, Organism=Drosophila melanogaster, GI24654975, Length=191, Percent_Identity=30.3664921465969, Blast_Score=67, Evalue=8e-12, Organism=Drosophila melanogaster, GI24654965, Length=197, Percent_Identity=25.8883248730964, Blast_Score=64, Evalue=8e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010987 - InterPro: IPR004045 - InterPro: IPR017933 - InterPro: IPR004046 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00043 GST_C; PF02798 GST_N [H]
EC number: NA
Molecular weight: Translated: 24999; Mature: 24999
Theoretical pI: Translated: 5.17; Mature: 5.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIELYTAATPNGHKISIALEELGLEYRVHALDLMTLEQKKPEFLAINPNGRIPAIVDTDN CEEEEEECCCCCCEEEEEHHHCCCEEEEEHHHEEEHHCCCCCEEEECCCCCCCEEEECCC DDFAVFESGAILLYLAEKTGKLLPTEPKARSEVIQWLMFQMGGVGPMMGQANVFYRYFPE CCEEEEECCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHEECCCH KIPAAIERYQKEGRRLFEVMNTQLEKHAYLAGDEYSVADIATYPWVRIYDWSGVDISGLD HHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHCCCCEEEEEECCCCCCCHHH ALQHWLERITARPAVAKGLAVPPPSEKSAEERAKDIAKMVTR HHHHHHHHHHCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure MIELYTAATPNGHKISIALEELGLEYRVHALDLMTLEQKKPEFLAINPNGRIPAIVDTDN CEEEEEECCCCCCEEEEEHHHCCCEEEEEHHHEEEHHCCCCCEEEECCCCCCCEEEECCC DDFAVFESGAILLYLAEKTGKLLPTEPKARSEVIQWLMFQMGGVGPMMGQANVFYRYFPE CCEEEEECCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHEECCCH KIPAAIERYQKEGRRLFEVMNTQLEKHAYLAGDEYSVADIATYPWVRIYDWSGVDISGLD HHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHCCCCEEEEEECCCCCCCHHH ALQHWLERITARPAVAKGLAVPPPSEKSAEERAKDIAKMVTR HHHHHHHHHHCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9205837; 9278503 [H]