Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119774225

Identifier: 119774225

GI number: 119774225

Start: 1315666

End: 1316295

Strand: Reverse

Name: 119774225

Synonym: Sama_1088

Alternate gene names: NA

Gene position: 1316295-1315666 (Counterclockwise)

Preceding gene: 119774227

Following gene: 119774224

Centisome position: 30.57

GC content: 57.62

Gene sequence:

>630_bases
ATGAAAATCCTCGAGCTTGCCCCTAGCCCCAGCGCCCGCCGCGTCGGCATTTTTTTGGCAGAACTCGGCATAGAGGTGCC
AAGAGAGCAGCTGAATTTAAGGGACGGCGACAACCTGACCCCTGAATTTAAACGTAAAAGCGTTAATGGCCGCATCCCCG
TACTGGAGCTGGATGATGGCACCCATATCTGTGAATCTGTCGCCATCTGCCGCTATTTTGATGCCCTGCATCCGCGCGAC
AGCAGCCTGTTTGGTAACAGCCCGCTGGAGCAGGCACAGGTGGAAATGTGGAACCGGGTGCTGGAACTGAATGGCCTGAT
GGTCGCGTTTCAGGCGTTTCGTAACCTCACCGGCTTTTTCAAAGACCGCGAGCGCTTTGTCGAGGCTTGGGGCGCGGAAT
CCCGTGAGCGCATCATAGAATTTCTGCCAACTCTGGAAGCACGCCTCGAAGGGCGTGACTTTGTTGCCATCGAACGCTTC
ACCATCGCCGATATCACAGGTTTTGTGCTGATTGGCTTCCTGCCGCGGCTCGAGATTGAACTGACCGACGCCATGCCCAA
CATTCGCCGCTGGCACGCAGCCATCGCCGCACGTCCCGCCGTGGCCACCCTGCTGGCAAGCCAGCAATAG

Upstream 100 bases:

>100_bases
TCGCAAAAGTGAATATTAACTCTCGATCTAATTATTGACCGTTCGTTCAGTTATGCAGTAGATTCTATCCTAACCGATCG
TTCAGATAAAGAGAGGCCTT

Downstream 100 bases:

>100_bases
AGGAGTACATCATGATTGAGCTTTATACCGCCGCGACCCCCAACGGCCATAAAATTTCCATTGCCCTTGAAGAATTAGGG
CTCGAGTATCGGGTACATGC

Product: glutathione S-transferase family protein

Products: NA

Alternate protein names: Glutathione S-Transferase Domain-Containing Protein; Glutathione S-Transferase Family Protein; Glutathione S-Transferase Domain Protein; Glutathione S-Transferase-Like; Glutathione S-Transferase N-Terminal Domain Protein; Glutathione Transferase; Glutathione S-Transferase C-Terminal Domain; Glutathione S-Transferase Domain; Glutathione-S-Transferase; Glutathione S-Transferase N-Terminal Domain; Glutathione-S Transferase; Glutathione S-Transferase Protein; Glutathionine S-Transferase; Glutathione S-Transferase C-Terminal Domain Protein; Glutathione S-Transferase II

Number of amino acids: Translated: 209; Mature: 209

Protein sequence:

>209_residues
MKILELAPSPSARRVGIFLAELGIEVPREQLNLRDGDNLTPEFKRKSVNGRIPVLELDDGTHICESVAICRYFDALHPRD
SSLFGNSPLEQAQVEMWNRVLELNGLMVAFQAFRNLTGFFKDRERFVEAWGAESRERIIEFLPTLEARLEGRDFVAIERF
TIADITGFVLIGFLPRLEIELTDAMPNIRRWHAAIAARPAVATLLASQQ

Sequences:

>Translated_209_residues
MKILELAPSPSARRVGIFLAELGIEVPREQLNLRDGDNLTPEFKRKSVNGRIPVLELDDGTHICESVAICRYFDALHPRD
SSLFGNSPLEQAQVEMWNRVLELNGLMVAFQAFRNLTGFFKDRERFVEAWGAESRERIIEFLPTLEARLEGRDFVAIERF
TIADITGFVLIGFLPRLEIELTDAMPNIRRWHAAIAARPAVATLLASQQ
>Mature_209_residues
MKILELAPSPSARRVGIFLAELGIEVPREQLNLRDGDNLTPEFKRKSVNGRIPVLELDDGTHICESVAICRYFDALHPRD
SSLFGNSPLEQAQVEMWNRVLELNGLMVAFQAFRNLTGFFKDRERFVEAWGAESRERIIEFLPTLEARLEGRDFVAIERF
TIADITGFVLIGFLPRLEIELTDAMPNIRRWHAAIAARPAVATLLASQQ

Specific function: Unknown

COG id: COG0625

COG function: function code O; Glutathione S-transferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI4503481, Length=171, Percent_Identity=30.4093567251462, Blast_Score=65, Evalue=4e-11,
Organism=Saccharomyces cerevisiae, GI6322968, Length=209, Percent_Identity=33.0143540669856, Blast_Score=99, Evalue=4e-22,
Organism=Drosophila melanogaster, GI17864594, Length=188, Percent_Identity=29.2553191489362, Blast_Score=77, Evalue=8e-15,
Organism=Drosophila melanogaster, GI17933730, Length=187, Percent_Identity=29.4117647058824, Blast_Score=70, Evalue=7e-13,
Organism=Drosophila melanogaster, GI20130115, Length=200, Percent_Identity=32.5, Blast_Score=70, Evalue=7e-13,
Organism=Drosophila melanogaster, GI24654992, Length=194, Percent_Identity=29.3814432989691, Blast_Score=67, Evalue=8e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23705; Mature: 23705

Theoretical pI: Translated: 5.16; Mature: 5.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKILELAPSPSARRVGIFLAELGIEVPREQLNLRDGDNLTPEFKRKSVNGRIPVLELDDG
CCEEECCCCCCCHHHHHHHHHHCCCCCHHHCCCCCCCCCCHHHHHCCCCCCCCEEEECCC
THICESVAICRYFDALHPRDSSLFGNSPLEQAQVEMWNRVLELNGLMVAFQAFRNLTGFF
HHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KDRERFVEAWGAESRERIIEFLPTLEARLEGRDFVAIERFTIADITGFVLIGFLPRLEIE
HHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHCCCEEE
LTDAMPNIRRWHAAIAARPAVATLLASQQ
ECCCCCHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKILELAPSPSARRVGIFLAELGIEVPREQLNLRDGDNLTPEFKRKSVNGRIPVLELDDG
CCEEECCCCCCCHHHHHHHHHHCCCCCHHHCCCCCCCCCCHHHHHCCCCCCCCEEEECCC
THICESVAICRYFDALHPRDSSLFGNSPLEQAQVEMWNRVLELNGLMVAFQAFRNLTGFF
HHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KDRERFVEAWGAESRERIIEFLPTLEARLEGRDFVAIERFTIADITGFVLIGFLPRLEIE
HHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHCCCEEE
LTDAMPNIRRWHAAIAARPAVATLLASQQ
ECCCCCHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA