Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119774084

Identifier: 119774084

GI number: 119774084

Start: 1146829

End: 1147965

Strand: Direct

Name: 119774084

Synonym: Sama_0947

Alternate gene names: NA

Gene position: 1146829-1147965 (Clockwise)

Preceding gene: 119774083

Following gene: 119774085

Centisome position: 26.63

GC content: 53.65

Gene sequence:

>1137_bases
ATGCAAGCAACACAGACCAAGGCCGCTAAGCCGAGGTTAATGTCACTGGACGCCCTGAGGGGCTTTGACATGTTCTGGAT
CTTGGGTGGGGAGAAGCTGTTTATTGCGCTCTTTGCCCTGACAGGATGGTCCTTCTGGCAGCTCGCCGATGCCGAGATGC
ATCATAGTGAGTGGCATGGCTTTACTTTTTACGATTTGATTTTCCCTCTGTTTATTTTTCTCTCCGGTGTGGCGCTGGGA
CTGTCGCCCAAACGGCTCGATAAACTGGCGCCAGCCGAGCGCAATCCAATTTATCGTCACGCGGTAAAGCGCTTGTTTTT
GTTGCTGGCGTTGGGCGTGCTCTATAACCACGGCTGGGGAACGGGCATTCCGGCTCATTCAGACGAAGTACGTTATGCCA
GCGTGCTGGGCCGCATTGCCTTTGCCTGGTTCTTTGCTGCGCTTTTGGTTTGGCATACCAGCCTGCGTACTCAGATAGCG
ACCGCCCTGGCTATTTTGTTTGGGTACGCTGCCATTCAGCTGTGGTTGCCGGTTCCCGGAGGTCAGGCAGGTGTGTTGAC
ACCAAGTGGCTCCATCAACGCCTGGGTAGACACCCATTTTCTGCCGGGGATCACCTATCAACACCGTCCCTACGATCCTG
AAGGTATTCTTTCCACTCTGCCGGCAATAGTGAATGCGCTGATGGGCGTGTTTGTTGGTCGCTTTATTGTGAAGCCAGAC
GCCAGGGGCGACTGGGCAAAGGCGGGAATTCTGACCGGGGCAGGGGGACTGTCGCTGGTGCTCGGTTGGAGTCTCGACTC
GGTATTGCCGGTGAACAAAGATTTGTGGACCTCCAGCTTTGTATTGGTGACCACCGGCTGGAATTTGTTGTTCCTCGCTC
TCTTTTATGTGCTGGTGGATGTGCTTGGTGCCAAGCGTCTGGCATTTCCGTTTGTGGTGATTGGGGTGAACTCCATCATT
ATTTATCTGGCATCCAGCCTGATGAACTGGGAATACCTCAGTAAGAGCCTCTTTGGTGGAGTTATCCATGCCTTACCTAT
GCCTGCCCAGGCGTTGGCGGCAGCCATCGGATTTTTGCTGGTACAGTGGGCCCTGCTTTATTGGATGTACCGTAAAGGCA
TATTCATCCGGATTTAA

Upstream 100 bases:

>100_bases
AGACGACTACCGGCCCTGGTGGAGTCAGCTCCTCCGGGGCCTGTTTTTATCTGTAAAAAACTGAAAGACTGAACAGATAA
CAAAAATAAAGGATAGAAGC

Downstream 100 bases:

>100_bases
TTCAAGGTTGTTAGCATGTTGGCGATCCGATGTGCATCTGGCAGCCCTGTTACATGTATTTTAATAAAATGACAGCGTTG
TCTTTTTGGGCTTGGTGCTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 378; Mature: 378

Protein sequence:

>378_residues
MQATQTKAAKPRLMSLDALRGFDMFWILGGEKLFIALFALTGWSFWQLADAEMHHSEWHGFTFYDLIFPLFIFLSGVALG
LSPKRLDKLAPAERNPIYRHAVKRLFLLLALGVLYNHGWGTGIPAHSDEVRYASVLGRIAFAWFFAALLVWHTSLRTQIA
TALAILFGYAAIQLWLPVPGGQAGVLTPSGSINAWVDTHFLPGITYQHRPYDPEGILSTLPAIVNALMGVFVGRFIVKPD
ARGDWAKAGILTGAGGLSLVLGWSLDSVLPVNKDLWTSSFVLVTTGWNLLFLALFYVLVDVLGAKRLAFPFVVIGVNSII
IYLASSLMNWEYLSKSLFGGVIHALPMPAQALAAAIGFLLVQWALLYWMYRKGIFIRI

Sequences:

>Translated_378_residues
MQATQTKAAKPRLMSLDALRGFDMFWILGGEKLFIALFALTGWSFWQLADAEMHHSEWHGFTFYDLIFPLFIFLSGVALG
LSPKRLDKLAPAERNPIYRHAVKRLFLLLALGVLYNHGWGTGIPAHSDEVRYASVLGRIAFAWFFAALLVWHTSLRTQIA
TALAILFGYAAIQLWLPVPGGQAGVLTPSGSINAWVDTHFLPGITYQHRPYDPEGILSTLPAIVNALMGVFVGRFIVKPD
ARGDWAKAGILTGAGGLSLVLGWSLDSVLPVNKDLWTSSFVLVTTGWNLLFLALFYVLVDVLGAKRLAFPFVVIGVNSII
IYLASSLMNWEYLSKSLFGGVIHALPMPAQALAAAIGFLLVQWALLYWMYRKGIFIRI
>Mature_378_residues
MQATQTKAAKPRLMSLDALRGFDMFWILGGEKLFIALFALTGWSFWQLADAEMHHSEWHGFTFYDLIFPLFIFLSGVALG
LSPKRLDKLAPAERNPIYRHAVKRLFLLLALGVLYNHGWGTGIPAHSDEVRYASVLGRIAFAWFFAALLVWHTSLRTQIA
TALAILFGYAAIQLWLPVPGGQAGVLTPSGSINAWVDTHFLPGITYQHRPYDPEGILSTLPAIVNALMGVFVGRFIVKPD
ARGDWAKAGILTGAGGLSLVLGWSLDSVLPVNKDLWTSSFVLVTTGWNLLFLALFYVLVDVLGAKRLAFPFVVIGVNSII
IYLASSLMNWEYLSKSLFGGVIHALPMPAQALAAAIGFLLVQWALLYWMYRKGIFIRI

Specific function: Unknown

COG id: COG4299

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI150378452, Length=424, Percent_Identity=26.1792452830189, Blast_Score=97, Evalue=2e-20,
Organism=Drosophila melanogaster, GI24639786, Length=376, Percent_Identity=24.7340425531915, Blast_Score=94, Evalue=2e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41824; Mature: 41824

Theoretical pI: Translated: 9.90; Mature: 9.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQATQTKAAKPRLMSLDALRGFDMFWILGGEKLFIALFALTGWSFWQLADAEMHHSEWHG
CCCCCCCCCCCCHHHHHHHCCCCEEEEECCHHHHHHHHHHHCCHHHHHHCHHHHHHHCCC
FTFYDLIFPLFIFLSGVALGLSPKRLDKLAPAERNPIYRHAVKRLFLLLALGVLYNHGWG
CHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC
TGIPAHSDEVRYASVLGRIAFAWFFAALLVWHTSLRTQIATALAILFGYAAIQLWLPVPG
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCC
GQAGVLTPSGSINAWVDTHFLPGITYQHRPYDPEGILSTLPAIVNALMGVFVGRFIVKPD
CCCEEECCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
ARGDWAKAGILTGAGGLSLVLGWSLDSVLPVNKDLWTSSFVLVTTGWNLLFLALFYVLVD
CCCCHHHHCEEECCCCHHEEEECCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHH
VLGAKRLAFPFVVIGVNSIIIYLASSLMNWEYLSKSLFGGVIHALPMPAQALAAAIGFLL
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
VQWALLYWMYRKGIFIRI
HHHHHHHHHHHCCEEEEC
>Mature Secondary Structure
MQATQTKAAKPRLMSLDALRGFDMFWILGGEKLFIALFALTGWSFWQLADAEMHHSEWHG
CCCCCCCCCCCCHHHHHHHCCCCEEEEECCHHHHHHHHHHHCCHHHHHHCHHHHHHHCCC
FTFYDLIFPLFIFLSGVALGLSPKRLDKLAPAERNPIYRHAVKRLFLLLALGVLYNHGWG
CHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC
TGIPAHSDEVRYASVLGRIAFAWFFAALLVWHTSLRTQIATALAILFGYAAIQLWLPVPG
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCC
GQAGVLTPSGSINAWVDTHFLPGITYQHRPYDPEGILSTLPAIVNALMGVFVGRFIVKPD
CCCEEECCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
ARGDWAKAGILTGAGGLSLVLGWSLDSVLPVNKDLWTSSFVLVTTGWNLLFLALFYVLVD
CCCCHHHHCEEECCCCHHEEEECCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHH
VLGAKRLAFPFVVIGVNSIIIYLASSLMNWEYLSKSLFGGVIHALPMPAQALAAAIGFLL
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
VQWALLYWMYRKGIFIRI
HHHHHHHHHHHCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA