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The map label for this gene is cirA [C]

Identifier: 119774075

GI number: 119774075

Start: 1132332

End: 1134977

Strand: Direct

Name: cirA [C]

Synonym: Sama_0938

Alternate gene names: 119774075

Gene position: 1132332-1134977 (Clockwise)

Preceding gene: 119774073

Following gene: 119774076

Centisome position: 26.3

GC content: 51.55

Gene sequence:

>2646_bases
ATGCGACCATCTACCTTTAAAAAGAGTGTCCTCGCTACCAATATCGCAATCCTCCTCGGTGGTGCGGTATCAGTAGGTGC
AGTGGCTGCCGAAGCTCCGGTTGATACTGCAAATATTGAAAAAATTGAAGTGCGCGGTATCCGCGCGTCCAACAAAGCCA
ACATCAATGAAAAGCGTTTTTCCAACGCTGTAGTCGATGCCGTTACTGCCGAAGATATTGGTAAACTCCCTGATTCCGAT
GTGGGTCAAGCACTTGGCCGTGTACCCGGTGTGACCGTAGGTCGCGCTTTTGGCCAGGGCAGTTCAGTATCTATCCGTGG
TACTGATCCTCTGATGACGCTTACCACCCTGAATGGCCAAAACGTGGCTTCGACCGGTTGGTACGATCAGATGAACATCG
ACCGTTCATTCAACTACTCAATGCTGCCAGCAGAACTGATTGGCGGTATGGAAGTGTACAAAACCACCCAGGCCAACCTC
GTTGAAGGTGGTATCGGTGGTACAGTTATTGTTAAAACCCGTAAACCACTGGATATGGAAGCTAACTCGATTTTTGGCTC
CGTAAAGGGTGAATACGGTTCAATCAATGAAGAGTGGGCCCCCGAAGTATCGGGCCTCTACAGCTGGAAAAACGAAGCCG
AAACCTTCGGTATTCTGGTTTCCGGTGCGTACGTAGACCGTGAATATCTGCGTGTGGGTACCGAGGCGGACCTCGATTGG
GGTGGCCGCTCTTCTATCCAGCCTTCAAGCTTCCTGCAAAGCCAGGAGCGCACGGCGCTGGATGCCACCTTGCAGTATCG
TCCTACTGACAACCTGGAGTTTGGTGCCCACATCCTGTCGCTGAAACTGGGCGCTGACAGCATTGGTGCCAACATGTACA
TCAATACCGACACCAACTGGGGTGCCGGTGATTCTCACTGCCAGCAGTTTAACGATGCTGGTGTATGTACTTACAGCGAT
ACACCGGAAAGCGATCCATCAGACGTGTTCTTCCAGAACTGGGCACGTAAAGGTGAAATGACTTCTGATACCTTCGAACT
GAACATGGAATACGATGGCGATGGTTATGCCATTGCTGCCGTAGCCGGTAAGACCAAGGCGGAAGGTGGTACTCAGATGA
GTGCGAACTTCGGTTATGGCTGGTGGGGAGACAAGTTTAAAGATATCAAGTGGGCTGGTGTGGTTGATGCCACCGGAAAG
CAAATTGATATCAACGGCCGTGACATGAGCTTCGGTATCGACAATCTTGACACCACAGTGGGCACTTCCCAGTGGACCGG
TATCCAGGGCCCAAACACCGACGAAGAGTCTTACGTTCAAATCGACCTGGACTTCGATCTGGATCTGGGTGCTATCAACA
AGTTTGAAACCGGTATCCGTTATACCGAGCACACTTTCGAGAAGAAAGAGTATCGTGCCGTGTATGGTACCTTGCCAAAC
GTGTTCAACAGCACCGATCTGTACAGCGGCACCATGAAGCTGGGCTATGACGAATGGACCATTCCAAAAGCCAACCTGGA
TGCCATGATAGATGCAACCGTGTCTCTGGTGGATGAGTTTGTCTACAGCCGCCCAGCCTACGGTAAAATCGATGAAGATA
ACCTGTCTCTGTACGGAATGTTCTCCTTCGAAGGCGAAGGTTTCCGCGGTAACTTCGGTTTGCGTTATGTTCAAACCGAC
GTGACGTCAAGCGGCCACGTCATCGATAACTCTCCGGCAGACAACCTGGGCATCAACGCCGGTTGGAGCGAAGAAGTTCA
AAGCGTAAGCGACAGCTATCACGATGTACTGCCAAGCGTAAACGTGGCATTCGATCTGGCTGATGACGTTATCCTGCGTT
TGGCAGCTGGTCAGGCTATCACCCGTCCAAACTACGACAACCTGTTCCTGTCGTCTTCATCTGGTTATCCGGATGACCGT
CGTGGCAACGAGCAAATCACCTACGGTAACCCAGGTCTGGAGCCAATGAAGTCGTCTCAGGCTGATGTCAGCATCGAGTA
CTACTATGGTGATGGCAACCTGTTTGCTGCTACCTACTTCATCAAGGATATCAGCAACTTCATCGTTGCAACTGCCCCGG
AAACCAAGGCGATTGGCGTAATCAACAATGACCTGGAAGTGCCTGCGGACAGCTGGATTGTAGACAGCTACATGAACGCC
GGTGGTGGCTCTATTGACGGTATCGAACTGCAATTGAACCACGCTTGGGATAACGGCTTTGGTATCAACGCCAACTACAC
CTTTACCGATGGCACTGCCCCTGCAGAAGTGTACACCGATAATATCGGCGTATTCACCGAAGCGTCCAAGCACACCACCA
ACCTCGTTGGTTACTGGGAAAATGATACCTTCTCAGCCCGTGCAGCCTACAACTGGCGCAGTGAGTACATGGTGCGTGAA
TACGGCAAATATTACGGTAACCGCATGCACGATGACTTCGGTACTCTGGATGTGACACTGGGATGGAACGTGACCGAGAA
CATCGCACTGCGTCTCGAGCTCATCAACCTGACTGCAGAAGATGACGTTCAGTACGGCGCTGCCGGTGTGGGTACTGCCG
TTAAGCCTGCGCTGCAGGATGGTTACCCAACCTGGTCGTTCAAAGGTGAAACCACTTATAAGCTGGGCGCAAGCTTCAAC
TTCTAA

Upstream 100 bases:

>100_bases
ATTATTGTGTAATGTTTGCGCTAGACATGACAGCGTTGTCATTCCTTCGGGAATGGTTATGGATGCAAAAACATAAAAAA
TAATATGGAAGGGAAACGAG

Downstream 100 bases:

>100_bases
GATAAATGTGTAATAAAAAACCCAGTCTCGGCTGGGTTTTTTTATTGAAGGACAGGTCTGCAAATGAAAATAACGAAAAT
TGCTATCCTGGGTGGTGGTA

Product: TonB-dependent receptor

Products: NA

Alternate protein names: Nb-Dependent Receptor; NB-Dependent Receptor Plug; NB-Dependent Outer Membrane Receptor; Nb-Dependent Outer Membrane Receptor Protein; Outer Membrane Protein; NB-Dependent Receptor Subfamily; NB-Dependent Outer Membrane Receptor Protein; NB-Dependent Receptor Subfamily Protein; Nucleoside Diphosphate Kinase; NB-Dependent Receptor Protein; NB Dependent Receptor-Related Protein; Crossover Junction Endodeoxyribonuclease RuvC; NB Dependent Receptor; Peptidase; NB-Dependent Receptor-Like Protein; Outer Membrane Insertion C-Terminal Signal; NB Dependent Receptor For Iron Chelates; 50S Ribosomal Protein L; NB-Dependent Outer Membrane Ferripyoverdine Receptor; 1-(5-Phosphoribosyl)-5-; 3-Dehydroquinate Synthase; Argininosuccinate Synthase; DEAD/DEAH Box Helicase-Like; NB-Dependent Receptor Domain Protein

Number of amino acids: Translated: 881; Mature: 881

Protein sequence:

>881_residues
MRPSTFKKSVLATNIAILLGGAVSVGAVAAEAPVDTANIEKIEVRGIRASNKANINEKRFSNAVVDAVTAEDIGKLPDSD
VGQALGRVPGVTVGRAFGQGSSVSIRGTDPLMTLTTLNGQNVASTGWYDQMNIDRSFNYSMLPAELIGGMEVYKTTQANL
VEGGIGGTVIVKTRKPLDMEANSIFGSVKGEYGSINEEWAPEVSGLYSWKNEAETFGILVSGAYVDREYLRVGTEADLDW
GGRSSIQPSSFLQSQERTALDATLQYRPTDNLEFGAHILSLKLGADSIGANMYINTDTNWGAGDSHCQQFNDAGVCTYSD
TPESDPSDVFFQNWARKGEMTSDTFELNMEYDGDGYAIAAVAGKTKAEGGTQMSANFGYGWWGDKFKDIKWAGVVDATGK
QIDINGRDMSFGIDNLDTTVGTSQWTGIQGPNTDEESYVQIDLDFDLDLGAINKFETGIRYTEHTFEKKEYRAVYGTLPN
VFNSTDLYSGTMKLGYDEWTIPKANLDAMIDATVSLVDEFVYSRPAYGKIDEDNLSLYGMFSFEGEGFRGNFGLRYVQTD
VTSSGHVIDNSPADNLGINAGWSEEVQSVSDSYHDVLPSVNVAFDLADDVILRLAAGQAITRPNYDNLFLSSSSGYPDDR
RGNEQITYGNPGLEPMKSSQADVSIEYYYGDGNLFAATYFIKDISNFIVATAPETKAIGVINNDLEVPADSWIVDSYMNA
GGGSIDGIELQLNHAWDNGFGINANYTFTDGTAPAEVYTDNIGVFTEASKHTTNLVGYWENDTFSARAAYNWRSEYMVRE
YGKYYGNRMHDDFGTLDVTLGWNVTENIALRLELINLTAEDDVQYGAAGVGTAVKPALQDGYPTWSFKGETTYKLGASFN
F

Sequences:

>Translated_881_residues
MRPSTFKKSVLATNIAILLGGAVSVGAVAAEAPVDTANIEKIEVRGIRASNKANINEKRFSNAVVDAVTAEDIGKLPDSD
VGQALGRVPGVTVGRAFGQGSSVSIRGTDPLMTLTTLNGQNVASTGWYDQMNIDRSFNYSMLPAELIGGMEVYKTTQANL
VEGGIGGTVIVKTRKPLDMEANSIFGSVKGEYGSINEEWAPEVSGLYSWKNEAETFGILVSGAYVDREYLRVGTEADLDW
GGRSSIQPSSFLQSQERTALDATLQYRPTDNLEFGAHILSLKLGADSIGANMYINTDTNWGAGDSHCQQFNDAGVCTYSD
TPESDPSDVFFQNWARKGEMTSDTFELNMEYDGDGYAIAAVAGKTKAEGGTQMSANFGYGWWGDKFKDIKWAGVVDATGK
QIDINGRDMSFGIDNLDTTVGTSQWTGIQGPNTDEESYVQIDLDFDLDLGAINKFETGIRYTEHTFEKKEYRAVYGTLPN
VFNSTDLYSGTMKLGYDEWTIPKANLDAMIDATVSLVDEFVYSRPAYGKIDEDNLSLYGMFSFEGEGFRGNFGLRYVQTD
VTSSGHVIDNSPADNLGINAGWSEEVQSVSDSYHDVLPSVNVAFDLADDVILRLAAGQAITRPNYDNLFLSSSSGYPDDR
RGNEQITYGNPGLEPMKSSQADVSIEYYYGDGNLFAATYFIKDISNFIVATAPETKAIGVINNDLEVPADSWIVDSYMNA
GGGSIDGIELQLNHAWDNGFGINANYTFTDGTAPAEVYTDNIGVFTEASKHTTNLVGYWENDTFSARAAYNWRSEYMVRE
YGKYYGNRMHDDFGTLDVTLGWNVTENIALRLELINLTAEDDVQYGAAGVGTAVKPALQDGYPTWSFKGETTYKLGASFN
F
>Mature_881_residues
MRPSTFKKSVLATNIAILLGGAVSVGAVAAEAPVDTANIEKIEVRGIRASNKANINEKRFSNAVVDAVTAEDIGKLPDSD
VGQALGRVPGVTVGRAFGQGSSVSIRGTDPLMTLTTLNGQNVASTGWYDQMNIDRSFNYSMLPAELIGGMEVYKTTQANL
VEGGIGGTVIVKTRKPLDMEANSIFGSVKGEYGSINEEWAPEVSGLYSWKNEAETFGILVSGAYVDREYLRVGTEADLDW
GGRSSIQPSSFLQSQERTALDATLQYRPTDNLEFGAHILSLKLGADSIGANMYINTDTNWGAGDSHCQQFNDAGVCTYSD
TPESDPSDVFFQNWARKGEMTSDTFELNMEYDGDGYAIAAVAGKTKAEGGTQMSANFGYGWWGDKFKDIKWAGVVDATGK
QIDINGRDMSFGIDNLDTTVGTSQWTGIQGPNTDEESYVQIDLDFDLDLGAINKFETGIRYTEHTFEKKEYRAVYGTLPN
VFNSTDLYSGTMKLGYDEWTIPKANLDAMIDATVSLVDEFVYSRPAYGKIDEDNLSLYGMFSFEGEGFRGNFGLRYVQTD
VTSSGHVIDNSPADNLGINAGWSEEVQSVSDSYHDVLPSVNVAFDLADDVILRLAAGQAITRPNYDNLFLSSSSGYPDDR
RGNEQITYGNPGLEPMKSSQADVSIEYYYGDGNLFAATYFIKDISNFIVATAPETKAIGVINNDLEVPADSWIVDSYMNA
GGGSIDGIELQLNHAWDNGFGINANYTFTDGTAPAEVYTDNIGVFTEASKHTTNLVGYWENDTFSARAAYNWRSEYMVRE
YGKYYGNRMHDDFGTLDVTLGWNVTENIALRLELINLTAEDDVQYGAAGVGTAVKPALQDGYPTWSFKGETTYKLGASFN
F

Specific function: Not Yet Known. Postulated To Participate In Iron Transport. Outer Membrane Receptor For Colicins Ia And Ib. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Outer Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 96095; Mature: 96095

Theoretical pI: Translated: 4.12; Mature: 4.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPSTFKKSVLATNIAILLGGAVSVGAVAAEAPVDTANIEKIEVRGIRASNKANINEKRF
CCCCHHHHHHHHHEEEEEECCCHHHCEEEECCCCCCCCCEEEEEEEEECCCCCCCCHHHH
SNAVVDAVTAEDIGKLPDSDVGQALGRVPGVTVGRAFGQGSSVSIRGTDPLMTLTTLNGQ
HHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEEEEHHCCCCCEEEEECCCCEEEEEEECCC
NVASTGWYDQMNIDRSFNYSMLPAELIGGMEVYKTTQANLVEGGIGGTVIVKTRKPLDME
CCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCEEEECCCCEEECCCCCEEEEEECCCCCCC
ANSIFGSVKGEYGSINEEWAPEVSGLYSWKNEAETFGILVSGAYVDREYLRVGTEADLDW
HHHEEEECCCCCCCCCCCCCCCHHHHHHCCCCCCEEEEEEEEEEECHHHHHCCCCCCCCC
GGRSSIQPSSFLQSQERTALDATLQYRPTDNLEFGAHILSLKLGADSIGANMYINTDTNW
CCCCCCCHHHHHHHHHCCEEEEEEEECCCCCCCCCEEEEEEEECCCCCCCEEEEECCCCC
GAGDSHCQQFNDAGVCTYSDTPESDPSDVFFQNWARKGEMTSDTFELNMEYDGDGYAIAA
CCCHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHHCCCCCCCCEEEEEEEECCCCEEEEE
VAGKTKAEGGTQMSANFGYGWWGDKFKDIKWAGVVDATGKQIDINGRDMSFGIDNLDTTV
EECCCCCCCCCEEECCCCCCCCCCCCCCEEEEEEEECCCCEEEECCCEEEECCCCCCCCC
GTSQWTGIQGPNTDEESYVQIDLDFDLDLGAINKFETGIRYTEHTFEKKEYRAVYGTLPN
CCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCHHHCCCCHHHHHHHHHHHHHHCCCCCC
VFNSTDLYSGTMKLGYDEWTIPKANLDAMIDATVSLVDEFVYSRPAYGKIDEDNLSLYGM
CCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEE
FSFEGEGFRGNFGLRYVQTDVTSSGHVIDNSPADNLGINAGWSEEVQSVSDSYHDVLPSV
EEECCCCEECCCCEEEEEEECCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC
NVAFDLADDVILRLAAGQAITRPNYDNLFLSSSSGYPDDRRGNEQITYGNPGLEPMKSSQ
EEEEEHHHHHHHHHHCCCEECCCCCCCEEEECCCCCCCCCCCCCEEEECCCCCCCCCCCC
ADVSIEYYYGDGNLFAATYFIKDISNFIVATAPETKAIGVINNDLEVPADSWIVDSYMNA
CCEEEEEEECCCCEEEEHHHHHHHCCEEEEECCCCEEEEEECCCCCCCCCCEEHHHHHCC
GGGSIDGIELQLNHAWDNGFGINANYTFTDGTAPAEVYTDNIGVFTEASKHTTNLVGYWE
CCCCCCEEEEEEEECCCCCEECCCEEEECCCCCCCEEEECCCCEEEECCCCCCEEEEEEC
NDTFSARAAYNWRSEYMVREYGKYYGNRMHDDFGTLDVTLGWNVTENIALRLELINLTAE
CCCEEEEEEECCHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCEEEEEEEEEECCC
DDVQYGAAGVGTAVKPALQDGYPTWSFKGETTYKLGASFNF
CCCCCCCCCCCCHHCHHHHCCCCCEEECCCEEEEECCCCCC
>Mature Secondary Structure
MRPSTFKKSVLATNIAILLGGAVSVGAVAAEAPVDTANIEKIEVRGIRASNKANINEKRF
CCCCHHHHHHHHHEEEEEECCCHHHCEEEECCCCCCCCCEEEEEEEEECCCCCCCCHHHH
SNAVVDAVTAEDIGKLPDSDVGQALGRVPGVTVGRAFGQGSSVSIRGTDPLMTLTTLNGQ
HHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEEEEHHCCCCCEEEEECCCCEEEEEEECCC
NVASTGWYDQMNIDRSFNYSMLPAELIGGMEVYKTTQANLVEGGIGGTVIVKTRKPLDME
CCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCEEEECCCCEEECCCCCEEEEEECCCCCCC
ANSIFGSVKGEYGSINEEWAPEVSGLYSWKNEAETFGILVSGAYVDREYLRVGTEADLDW
HHHEEEECCCCCCCCCCCCCCCHHHHHHCCCCCCEEEEEEEEEEECHHHHHCCCCCCCCC
GGRSSIQPSSFLQSQERTALDATLQYRPTDNLEFGAHILSLKLGADSIGANMYINTDTNW
CCCCCCCHHHHHHHHHCCEEEEEEEECCCCCCCCCEEEEEEEECCCCCCCEEEEECCCCC
GAGDSHCQQFNDAGVCTYSDTPESDPSDVFFQNWARKGEMTSDTFELNMEYDGDGYAIAA
CCCHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHHCCCCCCCCEEEEEEEECCCCEEEEE
VAGKTKAEGGTQMSANFGYGWWGDKFKDIKWAGVVDATGKQIDINGRDMSFGIDNLDTTV
EECCCCCCCCCEEECCCCCCCCCCCCCCEEEEEEEECCCCEEEECCCEEEECCCCCCCCC
GTSQWTGIQGPNTDEESYVQIDLDFDLDLGAINKFETGIRYTEHTFEKKEYRAVYGTLPN
CCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCHHHCCCCHHHHHHHHHHHHHHCCCCCC
VFNSTDLYSGTMKLGYDEWTIPKANLDAMIDATVSLVDEFVYSRPAYGKIDEDNLSLYGM
CCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEE
FSFEGEGFRGNFGLRYVQTDVTSSGHVIDNSPADNLGINAGWSEEVQSVSDSYHDVLPSV
EEECCCCEECCCCEEEEEEECCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC
NVAFDLADDVILRLAAGQAITRPNYDNLFLSSSSGYPDDRRGNEQITYGNPGLEPMKSSQ
EEEEEHHHHHHHHHHCCCEECCCCCCCEEEECCCCCCCCCCCCCEEEECCCCCCCCCCCC
ADVSIEYYYGDGNLFAATYFIKDISNFIVATAPETKAIGVINNDLEVPADSWIVDSYMNA
CCEEEEEEECCCCEEEEHHHHHHHCCEEEEECCCCEEEEEECCCCCCCCCCEEHHHHHCC
GGGSIDGIELQLNHAWDNGFGINANYTFTDGTAPAEVYTDNIGVFTEASKHTTNLVGYWE
CCCCCCEEEEEEEECCCCCEECCCEEEECCCCCCCEEEECCCCEEEECCCCCCEEEEEEC
NDTFSARAAYNWRSEYMVREYGKYYGNRMHDDFGTLDVTLGWNVTENIALRLELINLTAE
CCCEEEEEEECCHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCEEEEEEEEEECCC
DDVQYGAAGVGTAVKPALQDGYPTWSFKGETTYKLGASFNF
CCCCCCCCCCCCHHCHHHHCCCCCEEECCCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA