Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119774076

Identifier: 119774076

GI number: 119774076

Start: 1135041

End: 1136564

Strand: Direct

Name: 119774076

Synonym: Sama_0939

Alternate gene names: NA

Gene position: 1135041-1136564 (Clockwise)

Preceding gene: 119774075

Following gene: 119774078

Centisome position: 26.36

GC content: 51.84

Gene sequence:

>1524_bases
ATGAAAATAACGAAAATTGCTATCCTGGGTGGTGGTACTGCCGGTTGGTTGGCGGCCAACCATTTGGGGGCGGAGCTGTG
TGCCGATAAGGAGGTTGAAATAACCCTTATCGAATCGCCGGAGATCCCAACCATTGGTGTGGGGGAGGGCACCGTGCCCT
ATATCATGAAAGGCCTCAAACGCTTTGGCATATCTGAGTCCGAGCTGCTGGCAAACTGTGATACCACCTTCAAGCAGGGC
ATTAAGTTCGTCAATTGGCTCGACCCTGAGCGCCACGGCGATAACCACTATTACCATCCTTTCGACTCACCTTATCCCGG
TGGCATGGACATCAGCCATTACTGGCTGACCCAAAAAGATAAGCGCCCCTTTGATGATGTGGGTATACAGGCCCGGATTT
GTGAAAAAAACCTGGCTCCCAAGCGTATCAGTGCTCCCGAATATCAGGGTGAACTGGCTTACGCCTATCATTTCAATGCG
GTGAAGTTTGCTGCCTTGCTGGCTAAGAACGCCCGGGAGCGCTTTGGGGTCAAGTATCTGAGTGCCACAGTCGCAGGCGC
GACGCTGAATGACGACGGCGCCATTGCCAGTCTGAATACCAAGGAAGTCGGTAGCTTGGCGTTCGATTTTTATGTCGATT
GCAGCGGTTTTCACTCGGTACTGTTGGACAAGGTGCTTAAGGTGCCCTTTGTGGATAAAGGCAAAGAGCTGTTGACCGAC
TCAGTGATAGTACAGCAGGTTCCCTTGAAGAGCGGTGAGGCGCTTTCGCCCTATACCAAGGCGACTGCGCATAAGGCGGG
CTGGATTTGGGATATCCCTCTAACCACCCGTCGGGGTACCGGTTTCGTGTATTGCAGCCAATACATGAGCGATGAAGAGG
CCGTTTCCACCTTTGCCCAATACCTTGGCATGGACGTGAGCGAGATATCGCCAAGAAAGATCCCGATGAAGATTGGTTAT
CGGGAGAAGTTTTGGGCCAAAAATTGCGCCACCCTGGGGCTTGCTCAGGGCTTTGTGGAACCACTGGAAGCCACCTCGAT
ACTGGTAACGGACTTTTCTGCAGAACTGCTGGCCAAAAACTTCCCCAGGGAAACCTCTGATATTGAGGTACTTAGCCCTT
ACTACAATGATGTCATTACTTATGTATGGGAAAGGGTCATCGATTTTATCAAGCTGCATTACTGTCTCTCAGACAGGGAA
GATACCGGCTTTTGGGCAGCCAATCGCGATTCCGACACCTGGTCCGAGACCCTAAAATCCCGACTGGCAAAGTTTGCACT
CAGGCCTCCTCAGCAATCGGACTTTTTAAGCCGTTTTGATTTATTCGATGATAAAAACTTCCTGTATGTGCTCTATGGAA
TGGGCTTTTCAAGCCGTATCAAGGCGCTCGACCCGAGGGAGATAGAGCAGAGCAGGCAGCTGTTGGAGAGTAACGACAAA
TTGGCTGACAGGGCGGAGGAGTTGTTGATGGAGCACGGAAAGTGGCTCGCAGGTCTGAAGGCGGCCATGGCACGGGCATC
ATAG

Upstream 100 bases:

>100_bases
AACCACTTATAAGCTGGGCGCAAGCTTCAACTTCTAAGATAAATGTGTAATAAAAAACCCAGTCTCGGCTGGGTTTTTTT
ATTGAAGGACAGGTCTGCAA

Downstream 100 bases:

>100_bases
CCGTGATGGTGTAGGTGCGTTAAATAAAAAAGCCGGGTAACCCCGGCTTTTTCTATGCCTTTTGGGATTATTCGCCCATC
ACCAGGTCGATTTGATTCAG

Product: tryptophan halogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 507; Mature: 507

Protein sequence:

>507_residues
MKITKIAILGGGTAGWLAANHLGAELCADKEVEITLIESPEIPTIGVGEGTVPYIMKGLKRFGISESELLANCDTTFKQG
IKFVNWLDPERHGDNHYYHPFDSPYPGGMDISHYWLTQKDKRPFDDVGIQARICEKNLAPKRISAPEYQGELAYAYHFNA
VKFAALLAKNARERFGVKYLSATVAGATLNDDGAIASLNTKEVGSLAFDFYVDCSGFHSVLLDKVLKVPFVDKGKELLTD
SVIVQQVPLKSGEALSPYTKATAHKAGWIWDIPLTTRRGTGFVYCSQYMSDEEAVSTFAQYLGMDVSEISPRKIPMKIGY
REKFWAKNCATLGLAQGFVEPLEATSILVTDFSAELLAKNFPRETSDIEVLSPYYNDVITYVWERVIDFIKLHYCLSDRE
DTGFWAANRDSDTWSETLKSRLAKFALRPPQQSDFLSRFDLFDDKNFLYVLYGMGFSSRIKALDPREIEQSRQLLESNDK
LADRAEELLMEHGKWLAGLKAAMARAS

Sequences:

>Translated_507_residues
MKITKIAILGGGTAGWLAANHLGAELCADKEVEITLIESPEIPTIGVGEGTVPYIMKGLKRFGISESELLANCDTTFKQG
IKFVNWLDPERHGDNHYYHPFDSPYPGGMDISHYWLTQKDKRPFDDVGIQARICEKNLAPKRISAPEYQGELAYAYHFNA
VKFAALLAKNARERFGVKYLSATVAGATLNDDGAIASLNTKEVGSLAFDFYVDCSGFHSVLLDKVLKVPFVDKGKELLTD
SVIVQQVPLKSGEALSPYTKATAHKAGWIWDIPLTTRRGTGFVYCSQYMSDEEAVSTFAQYLGMDVSEISPRKIPMKIGY
REKFWAKNCATLGLAQGFVEPLEATSILVTDFSAELLAKNFPRETSDIEVLSPYYNDVITYVWERVIDFIKLHYCLSDRE
DTGFWAANRDSDTWSETLKSRLAKFALRPPQQSDFLSRFDLFDDKNFLYVLYGMGFSSRIKALDPREIEQSRQLLESNDK
LADRAEELLMEHGKWLAGLKAAMARAS
>Mature_507_residues
MKITKIAILGGGTAGWLAANHLGAELCADKEVEITLIESPEIPTIGVGEGTVPYIMKGLKRFGISESELLANCDTTFKQG
IKFVNWLDPERHGDNHYYHPFDSPYPGGMDISHYWLTQKDKRPFDDVGIQARICEKNLAPKRISAPEYQGELAYAYHFNA
VKFAALLAKNARERFGVKYLSATVAGATLNDDGAIASLNTKEVGSLAFDFYVDCSGFHSVLLDKVLKVPFVDKGKELLTD
SVIVQQVPLKSGEALSPYTKATAHKAGWIWDIPLTTRRGTGFVYCSQYMSDEEAVSTFAQYLGMDVSEISPRKIPMKIGY
REKFWAKNCATLGLAQGFVEPLEATSILVTDFSAELLAKNFPRETSDIEVLSPYYNDVITYVWERVIDFIKLHYCLSDRE
DTGFWAANRDSDTWSETLKSRLAKFALRPPQQSDFLSRFDLFDDKNFLYVLYGMGFSSRIKALDPREIEQSRQLLESNDK
LADRAEELLMEHGKWLAGLKAAMARAS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006905 [H]

Pfam domain/function: PF04820 Trp_halogenase [H]

EC number: NA

Molecular weight: Translated: 56846; Mature: 56846

Theoretical pI: Translated: 5.70; Mature: 5.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKITKIAILGGGTAGWLAANHLGAELCADKEVEITLIESPEIPTIGVGEGTVPYIMKGLK
CCEEEEEEEECCCHHHHHHHHCCHHHHCCCCEEEEEECCCCCCEEECCCCCHHHHHHHHH
RFGISESELLANCDTTFKQGIKFVNWLDPERHGDNHYYHPFDSPYPGGMDISHYWLTQKD
HHCCCHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCC
KRPFDDVGIQARICEKNLAPKRISAPEYQGELAYAYHFNAVKFAALLAKNARERFGVKYL
CCCCHHCCCEEEEHHCCCCCCCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHCHHHH
SATVAGATLNDDGAIASLNTKEVGSLAFDFYVDCSGFHSVLLDKVLKVPFVDKGKELLTD
HHHHCCCEECCCCCEEECCHHHHCCEEEEEEECCCHHHHHHHHHHHCCCCCCCCHHHHHH
SVIVQQVPLKSGEALSPYTKATAHKAGWIWDIPLTTRRGTGFVYCSQYMSDEEAVSTFAQ
HHHHHHCCCCCCCCCCCHHHHHHCCCCEEEECCCCCCCCCCEEEEHHHCCCHHHHHHHHH
YLGMDVSEISPRKIPMKIGYREKFWAKNCATLGLAQGFVEPLEATSILVTDFSAELLAKN
HHCCCHHHCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCHHHHHHHC
FPRETSDIEVLSPYYNDVITYVWERVIDFIKLHYCLSDREDTGFWAANRDSDTWSETLKS
CCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCHHHHHHHHH
RLAKFALRPPQQSDFLSRFDLFDDKNFLYVLYGMGFSSRIKALDPREIEQSRQLLESNDK
HHHHHHCCCCCHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCH
LADRAEELLMEHGKWLAGLKAAMARAS
HHHHHHHHHHHCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MKITKIAILGGGTAGWLAANHLGAELCADKEVEITLIESPEIPTIGVGEGTVPYIMKGLK
CCEEEEEEEECCCHHHHHHHHCCHHHHCCCCEEEEEECCCCCCEEECCCCCHHHHHHHHH
RFGISESELLANCDTTFKQGIKFVNWLDPERHGDNHYYHPFDSPYPGGMDISHYWLTQKD
HHCCCHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCC
KRPFDDVGIQARICEKNLAPKRISAPEYQGELAYAYHFNAVKFAALLAKNARERFGVKYL
CCCCHHCCCEEEEHHCCCCCCCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHCHHHH
SATVAGATLNDDGAIASLNTKEVGSLAFDFYVDCSGFHSVLLDKVLKVPFVDKGKELLTD
HHHHCCCEECCCCCEEECCHHHHCCEEEEEEECCCHHHHHHHHHHHCCCCCCCCHHHHHH
SVIVQQVPLKSGEALSPYTKATAHKAGWIWDIPLTTRRGTGFVYCSQYMSDEEAVSTFAQ
HHHHHHCCCCCCCCCCCHHHHHHCCCCEEEECCCCCCCCCCEEEEHHHCCCHHHHHHHHH
YLGMDVSEISPRKIPMKIGYREKFWAKNCATLGLAQGFVEPLEATSILVTDFSAELLAKN
HHCCCHHHCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCHHHHHHHC
FPRETSDIEVLSPYYNDVITYVWERVIDFIKLHYCLSDREDTGFWAANRDSDTWSETLKS
CCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCHHHHHHHHH
RLAKFALRPPQQSDFLSRFDLFDDKNFLYVLYGMGFSSRIKALDPREIEQSRQLLESNDK
HHHHHHCCCCCHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCH
LADRAEELLMEHGKWLAGLKAAMARAS
HHHHHHHHHHHCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]