| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is lgt [H]
Identifier: 119774003
GI number: 119774003
Start: 1057435
End: 1058241
Strand: Direct
Name: lgt [H]
Synonym: Sama_0866
Alternate gene names: 119774003
Gene position: 1057435-1058241 (Clockwise)
Preceding gene: 119774002
Following gene: 119774004
Centisome position: 24.56
GC content: 52.17
Gene sequence:
>807_bases ATGCCATTGAATTTTCCCGATATAGATCCAGTCATTGCCAAGTTTGGGCCCTTTGAGCTGTTCGGCCAGAGCTTTGAACC GGCTTTGCGCTGGTATGGGCTTATGTACCTCGTTGGCTTTTTGGCGGCCCTGTGGCTGTTAAATCGCAAAGCAGATCAAT CGAACGGCGTTTGGAGCCGCGAGCAGGTATCAGACTTACTATTTTATGGCTTTCTCGGTGTAGTGCTGGGGGGGCGTTTG GGTTATGTGCTCTTTTATCATTTCGACCTCTTGCTTGCAGATCCTGTGTACCTGTTTCGGATCTCAGAAGGGGGCATGTC ATTCCATGGCGGCCTTATCGGGGTGATAACCGCCATGGTTTATATCGCCTGGCGTCAGGGGCGACAATTTTTCGCAGTAG CCGATATGGTGGCACCTGTGGTGCCCATTGGCCTTGGGGCCGGTCGCATAGGTAATTTTATCAACGGCGAGCTGTGGGGC CGGGTATCTGATGTGCCCTGGGCCATGGTATTTCCCACCGGTGGCCCCGAGCCCAGGCATCCATCACAGCTGTATCAATT CGCGTTGGAAGGGGTCGCCCTGTATATGCTTCTGTGGTGGTTTGCCAAACGAACCAACAAGGTAGGCGCCGTATCAGGCA TGTTCCTTTTGGGCTATGGTGTCTTTCGAATAGTCGTTGAAACCGTACGCCAGCCTGACGCACACTTGGGCTTTTACCTC GGTTTTATTACCATGGGCCAAATTCTTTCTCTGCCGATGATCCTCTTCGGTCTTTATTTGATTTTGCGTAAACAGGAAAC CCGCTGA
Upstream 100 bases:
>100_bases CTCAAGAAAATTTTTGCCGTGCTGTTAACCCTGATTGGTCTGCGTCTGGTGATGGGGTGAACTTTTTCAGCCTACTCAAC TCGGTTACCCCGGAACTGAC
Downstream 100 bases:
>100_bases TGAAGCAGTATCTCGACTTAATGAAGCACATCCTCGATAAGGGGACAGATAAAAGTGACAGAACCGGTACAGGCACCCGT TCGGTTTTCGGTTATCAGAT
Product: prolipoprotein diacylglyceryl transferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 268; Mature: 267
Protein sequence:
>268_residues MPLNFPDIDPVIAKFGPFELFGQSFEPALRWYGLMYLVGFLAALWLLNRKADQSNGVWSREQVSDLLFYGFLGVVLGGRL GYVLFYHFDLLLADPVYLFRISEGGMSFHGGLIGVITAMVYIAWRQGRQFFAVADMVAPVVPIGLGAGRIGNFINGELWG RVSDVPWAMVFPTGGPEPRHPSQLYQFALEGVALYMLLWWFAKRTNKVGAVSGMFLLGYGVFRIVVETVRQPDAHLGFYL GFITMGQILSLPMILFGLYLILRKQETR
Sequences:
>Translated_268_residues MPLNFPDIDPVIAKFGPFELFGQSFEPALRWYGLMYLVGFLAALWLLNRKADQSNGVWSREQVSDLLFYGFLGVVLGGRL GYVLFYHFDLLLADPVYLFRISEGGMSFHGGLIGVITAMVYIAWRQGRQFFAVADMVAPVVPIGLGAGRIGNFINGELWG RVSDVPWAMVFPTGGPEPRHPSQLYQFALEGVALYMLLWWFAKRTNKVGAVSGMFLLGYGVFRIVVETVRQPDAHLGFYL GFITMGQILSLPMILFGLYLILRKQETR >Mature_267_residues PLNFPDIDPVIAKFGPFELFGQSFEPALRWYGLMYLVGFLAALWLLNRKADQSNGVWSREQVSDLLFYGFLGVVLGGRLG YVLFYHFDLLLADPVYLFRISEGGMSFHGGLIGVITAMVYIAWRQGRQFFAVADMVAPVVPIGLGAGRIGNFINGELWGR VSDVPWAMVFPTGGPEPRHPSQLYQFALEGVALYMLLWWFAKRTNKVGAVSGMFLLGYGVFRIVVETVRQPDAHLGFYLG FITMGQILSLPMILFGLYLILRKQETR
Specific function: Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins [H]
COG id: COG0682
COG function: function code M; Prolipoprotein diacylglyceryltransferase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the lgt family [H]
Homologues:
Organism=Escherichia coli, GI1789192, Length=283, Percent_Identity=52.2968197879859, Blast_Score=278, Evalue=4e-76,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001640 [H]
Pfam domain/function: PF01790 LGT [H]
EC number: 2.4.99.- [C]
Molecular weight: Translated: 30106; Mature: 29975
Theoretical pI: Translated: 9.12; Mature: 9.12
Prosite motif: PS01311 LGT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLNFPDIDPVIAKFGPFELFGQSFEPALRWYGLMYLVGFLAALWLLNRKADQSNGVWSR CCCCCCCCCHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCH EQVSDLLFYGFLGVVLGGRLGYVLFYHFDLLLADPVYLFRISEGGMSFHGGLIGVITAMV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCHHHHHHHHH YIAWRQGRQFFAVADMVAPVVPIGLGAGRIGNFINGELWGRVSDVPWAMVFPTGGPEPRH HHHHHCCCHHHHHHHHHHHHHHCCCCCHHHCCCCCCHHCCCCCCCCEEEEECCCCCCCCC PSQLYQFALEGVALYMLLWWFAKRTNKVGAVSGMFLLGYGVFRIVVETVRQPDAHLGFYL HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH GFITMGQILSLPMILFGLYLILRKQETR HHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure PLNFPDIDPVIAKFGPFELFGQSFEPALRWYGLMYLVGFLAALWLLNRKADQSNGVWSR CCCCCCCCHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCH EQVSDLLFYGFLGVVLGGRLGYVLFYHFDLLLADPVYLFRISEGGMSFHGGLIGVITAMV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCHHHHHHHHH YIAWRQGRQFFAVADMVAPVVPIGLGAGRIGNFINGELWGRVSDVPWAMVFPTGGPEPRH HHHHHCCCHHHHHHHHHHHHHHCCCCCHHHCCCCCCHHCCCCCCCCEEEEECCCCCCCCC PSQLYQFALEGVALYMLLWWFAKRTNKVGAVSGMFLLGYGVFRIVVETVRQPDAHLGFYL HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH GFITMGQILSLPMILFGLYLILRKQETR HHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12368813 [H]