| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is uppP
Identifier: 119773968
GI number: 119773968
Start: 1014399
End: 1015199
Strand: Direct
Name: uppP
Synonym: Sama_0831
Alternate gene names: 119773968
Gene position: 1014399-1015199 (Clockwise)
Preceding gene: 119773967
Following gene: 119773969
Centisome position: 23.56
GC content: 52.93
Gene sequence:
>801_bases ATGGATACCTTGCAGGTCATTATCCTTGCCCTTATTCAGGGCCTGACCGAATTTTTGCCCATTTCCAGCTCGGCCCACCT GATTTTACCGGCCCAGCTGTTTGGCTGGGAAGACCAGGGCTTGTCCTTCGACGTGGCCGTGCACATTGGCTCGCTGGCGG CCGTGGTGATTTATTTTCGCAACGAAATCCTGGCCATGTTGAAGGCTTGGCTTGCCAGCATTTTCAGGGGGCAACAGAGC GACGACAGCAAGCTCGCCTGGTGGATTATTCTGGCGACTATTCCCGCCATTGGCGTGGGTTTTACGGCAAAAGATATGGT GGAAACCCACTTGCGTGGCCCTGGCGTAATTGCCATTACCACAGTTATCTTTGGCTTGCTGCTGTGGTTTGCTGACCGTA TCGCCAAAGATGAAATGACCGAGTACCAAACCGGCTGGCGCAAGGCGCTGCTGATTGGTGTTGCACAGGCGCTGGCGCTC ATTCCCGGAACGTCTCGCAGTGGCATTACTATCACAGCTGCGCTGATGCTGGGGCTGAAACGGGAAGCGGCGGCCCGCTT CTCATTTTTGATGTCCATCCCCGTGATTTTGGGCGCTGCATTGCTGATGACCAAAGACATCATCACAGAAAATCACGTGG TTGACTGGCATGCACTGGCACTGGGGTCGATACTGTCCTTTATTGCGGCTTATGCCTGTATTTATTTCTTCCTCAAGATT ATCAGTCGCATGGGAATGACCCCCTTTGTGATTTACCGCATCGCGCTGGGTGTATTCCTCTGCGGCTTTATTTATTTGTA A
Upstream 100 bases:
>100_bases TTATGCAGAGCTTTGGCAGCAATTCGATAAACAAAGCCAGCGCCTTTGGCCGGTGGCATTTTCCTGGAACGACGCTTCCC TCATTTAATAAAGGAATATT
Downstream 100 bases:
>100_bases TAGTTGCGTAATTCAGATTGACCAAAGGGGCGGCATTGGCCGCCTCTTTGATTTAAGGAGTTTTCATGGAGTTTCAGTGT CCACTTTGTCGCCAACGGCT
Product: undecaprenyl pyrophosphate phosphatase
Products: NA
Alternate protein names: Bacitracin resistance protein; Undecaprenyl pyrophosphate phosphatase
Number of amino acids: Translated: 266; Mature: 266
Protein sequence:
>266_residues MDTLQVIILALIQGLTEFLPISSSAHLILPAQLFGWEDQGLSFDVAVHIGSLAAVVIYFRNEILAMLKAWLASIFRGQQS DDSKLAWWIILATIPAIGVGFTAKDMVETHLRGPGVIAITTVIFGLLLWFADRIAKDEMTEYQTGWRKALLIGVAQALAL IPGTSRSGITITAALMLGLKREAAARFSFLMSIPVILGAALLMTKDIITENHVVDWHALALGSILSFIAAYACIYFFLKI ISRMGMTPFVIYRIALGVFLCGFIYL
Sequences:
>Translated_266_residues MDTLQVIILALIQGLTEFLPISSSAHLILPAQLFGWEDQGLSFDVAVHIGSLAAVVIYFRNEILAMLKAWLASIFRGQQS DDSKLAWWIILATIPAIGVGFTAKDMVETHLRGPGVIAITTVIFGLLLWFADRIAKDEMTEYQTGWRKALLIGVAQALAL IPGTSRSGITITAALMLGLKREAAARFSFLMSIPVILGAALLMTKDIITENHVVDWHALALGSILSFIAAYACIYFFLKI ISRMGMTPFVIYRIALGVFLCGFIYL >Mature_266_residues MDTLQVIILALIQGLTEFLPISSSAHLILPAQLFGWEDQGLSFDVAVHIGSLAAVVIYFRNEILAMLKAWLASIFRGQQS DDSKLAWWIILATIPAIGVGFTAKDMVETHLRGPGVIAITTVIFGLLLWFADRIAKDEMTEYQTGWRKALLIGVAQALAL IPGTSRSGITITAALMLGLKREAAARFSFLMSIPVILGAALLMTKDIITENHVVDWHALALGSILSFIAAYACIYFFLKI ISRMGMTPFVIYRIALGVFLCGFIYL
Specific function: Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin
COG id: COG1968
COG function: function code V; Uncharacterized bacitracin resistance protein
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the uppP family
Homologues:
Organism=Escherichia coli, GI1789437, Length=259, Percent_Identity=35.1351351351351, Blast_Score=135, Evalue=4e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): UPPP_SHEAM (A1S3T2)
Other databases:
- EMBL: CP000507 - RefSeq: YP_926708.1 - ProteinModelPortal: A1S3T2 - STRING: A1S3T2 - GeneID: 4603083 - GenomeReviews: CP000507_GR - KEGG: saz:Sama_0831 - NMPDR: fig|326297.7.peg.782 - eggNOG: COG1968 - HOGENOM: HBG391969 - OMA: HSMYWFV - PhylomeDB: A1S3T2 - ProtClustDB: PRK00281 - GO: GO:0016311 - HAMAP: MF_01006 - InterPro: IPR003824 - TIGRFAMs: TIGR00753
Pfam domain/function: PF02673 BacA
EC number: =3.6.1.27
Molecular weight: Translated: 29150; Mature: 29150
Theoretical pI: Translated: 7.63; Mature: 7.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x122a47b0)-; HASH(0x11e5b268)-; HASH(0x1178b1c8)-; HASH(0x10b17520)-; HASH(0x1166069c)-; HASH(0x123c3560)-; HASH(0x12326a48)-; HASH(0x11a019fc)-;
Cys/Met content:
0.8 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDTLQVIILALIQGLTEFLPISSSAHLILPAQLFGWEDQGLSFDVAVHIGSLAAVVIYFR CCHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHCCCCCCCCEEHHHHHHHHHHHHHHHH NEILAMLKAWLASIFRGQQSDDSKLAWWIILATIPAIGVGFTAKDMVETHLRGPGVIAIT HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHH TVIFGLLLWFADRIAKDEMTEYQTGWRKALLIGVAQALALIPGTSRSGITITAALMLGLK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH REAAARFSFLMSIPVILGAALLMTKDIITENHVVDWHALALGSILSFIAAYACIYFFLKI HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH ISRMGMTPFVIYRIALGVFLCGFIYL HHHCCCCHHHHHHHHHHHHHHHHHCH >Mature Secondary Structure MDTLQVIILALIQGLTEFLPISSSAHLILPAQLFGWEDQGLSFDVAVHIGSLAAVVIYFR CCHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHCCCCCCCCEEHHHHHHHHHHHHHHHH NEILAMLKAWLASIFRGQQSDDSKLAWWIILATIPAIGVGFTAKDMVETHLRGPGVIAIT HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHH TVIFGLLLWFADRIAKDEMTEYQTGWRKALLIGVAQALALIPGTSRSGITITAALMLGLK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH REAAARFSFLMSIPVILGAALLMTKDIITENHVVDWHALALGSILSFIAAYACIYFFLKI HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH ISRMGMTPFVIYRIALGVFLCGFIYL HHHCCCCHHHHHHHHHHHHHHHHHCH
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA