Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119773732

Identifier: 119773732

GI number: 119773732

Start: 744021

End: 745241

Strand: Direct

Name: 119773732

Synonym: Sama_0594

Alternate gene names: NA

Gene position: 744021-745241 (Clockwise)

Preceding gene: 119773731

Following gene: 119773733

Centisome position: 17.28

GC content: 57.25

Gene sequence:

>1221_bases
ATGAGCAGCAACCTGCACCAGTCCGGGGTGCGGCTGCTGAGGATGCTTGGTCGTCACGCCGAGACAGTGATGGATGTGTA
CCTGAGCGGCGCCGTGGACGAGGCCAACGCCGATGCCGGTGTGCTGAAGAAGCTCACCGAGGCCGGCATTCTGTGGCGCC
CTGAGGAAGACGAGGGCCTAAGGCTGACCCGCAGCGTGCGGGCGCTGCTCGAAGAGGGCCTTAAAGATGAGCGCAATCGC
CAGATTAACGCCAACGTAGGCTCGGCGCTTGCCACCATCAAGACGCTGGCTAACCACTATAAGGAGGCGCGCAGCCACTC
TGACTACAGCGCCGCGGAGGCGTATCTGGCCGACCTCAGTGAGCATGTGTACGCCTTTACCGAAAACCTTCGTTATTCCA
TCCGTGTGCTGTGGGGGCGGATTAACAACGAATTCGGTTATGTCGGTACCATCAGCGCTAAAATCCGTGAGAACGAACTG
GCCCAGAGCCAGGTGTCTGAGCTGTTGAACGGCCTGGAGCTGTTTCAGTTCAGCGAGCTTGGGGAAATCGCCTCTGATAT
CCGTGAGCTTCGAAAACTGCTGGTAACCACCCTGCAGGAGACCCTGAGTGACTGTACTCAGGAGCTCAGTGTGGTGCAGG
CAAGGCTGTTGGAGCTGCTTGGTCGTTTCCGGCAAATTCAGGGCCGTACCAGGCTGCTCAGGGGCTGGCTTCTGTACACA
GATATGCACCCTGACTACGAGCCGATGGATCATGTGGCCCACCGCAAGGTGCCCATGCTGTTTAACCGCGCAGAGGCCAT
GCTGGCCGATGCCCATGTGGATGTGCATAACCAGAGCCAGGAGCAGGAGCTGATGGAGATGGTGGCGCGCATCAAATCCA
TCAGTCGCCTCGATCTAAAGCCTGCTGTCAAGGCGGCAGAAACCAGCGTGGTGCTGAGTGCGGCGGAAGACTTCGATATT
CCGGAAAATCCACTCAAGCAGGATGTGGACGACTACTTTGTGGCGGTAATAGATTCAGGCAAGCGCCAGTCGGCGCTGGT
GTACCTGCAGGAAAAAGCTTTGCCATGGGATTCAGAAAGCTGGATTTATCAGGTGATTGGCGGCTTTGAGGGCCTGAGCG
AAGAGCATAAATCCTTCTTCGAACTGGAGCCTTTGGGTGAGCCTCATCCTGTGTATACCGGTAACTTCATTATCCGCGAC
GTGGAGCTGTGGCTCAGTTAG

Upstream 100 bases:

>100_bases
GTAAGCTTGATTATCTCTATGAAGTGATTCGCTTTATCGATGAAACTGAAGGGCTGAACCTGGAGGCGCAGGCCGAAACC
GCCACCCAGAGGGAGCTGAT

Downstream 100 bases:

>100_bases
CCCCGCAGTCTTGCCAAGGCCACCTCTGGGTGGCCTTCTTATTGGCTGTAACATGGCGTGCTGGGCTGGTGGTGGCGGTG
GATGCAGAGAATTACTTAGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 406; Mature: 405

Protein sequence:

>406_residues
MSSNLHQSGVRLLRMLGRHAETVMDVYLSGAVDEANADAGVLKKLTEAGILWRPEEDEGLRLTRSVRALLEEGLKDERNR
QINANVGSALATIKTLANHYKEARSHSDYSAAEAYLADLSEHVYAFTENLRYSIRVLWGRINNEFGYVGTISAKIRENEL
AQSQVSELLNGLELFQFSELGEIASDIRELRKLLVTTLQETLSDCTQELSVVQARLLELLGRFRQIQGRTRLLRGWLLYT
DMHPDYEPMDHVAHRKVPMLFNRAEAMLADAHVDVHNQSQEQELMEMVARIKSISRLDLKPAVKAAETSVVLSAAEDFDI
PENPLKQDVDDYFVAVIDSGKRQSALVYLQEKALPWDSESWIYQVIGGFEGLSEEHKSFFELEPLGEPHPVYTGNFIIRD
VELWLS

Sequences:

>Translated_406_residues
MSSNLHQSGVRLLRMLGRHAETVMDVYLSGAVDEANADAGVLKKLTEAGILWRPEEDEGLRLTRSVRALLEEGLKDERNR
QINANVGSALATIKTLANHYKEARSHSDYSAAEAYLADLSEHVYAFTENLRYSIRVLWGRINNEFGYVGTISAKIRENEL
AQSQVSELLNGLELFQFSELGEIASDIRELRKLLVTTLQETLSDCTQELSVVQARLLELLGRFRQIQGRTRLLRGWLLYT
DMHPDYEPMDHVAHRKVPMLFNRAEAMLADAHVDVHNQSQEQELMEMVARIKSISRLDLKPAVKAAETSVVLSAAEDFDI
PENPLKQDVDDYFVAVIDSGKRQSALVYLQEKALPWDSESWIYQVIGGFEGLSEEHKSFFELEPLGEPHPVYTGNFIIRD
VELWLS
>Mature_405_residues
SSNLHQSGVRLLRMLGRHAETVMDVYLSGAVDEANADAGVLKKLTEAGILWRPEEDEGLRLTRSVRALLEEGLKDERNRQ
INANVGSALATIKTLANHYKEARSHSDYSAAEAYLADLSEHVYAFTENLRYSIRVLWGRINNEFGYVGTISAKIRENELA
QSQVSELLNGLELFQFSELGEIASDIRELRKLLVTTLQETLSDCTQELSVVQARLLELLGRFRQIQGRTRLLRGWLLYTD
MHPDYEPMDHVAHRKVPMLFNRAEAMLADAHVDVHNQSQEQELMEMVARIKSISRLDLKPAVKAAETSVVLSAAEDFDIP
ENPLKQDVDDYFVAVIDSGKRQSALVYLQEKALPWDSESWIYQVIGGFEGLSEEHKSFFELEPLGEPHPVYTGNFIIRDV
ELWLS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46042; Mature: 45910

Theoretical pI: Translated: 4.81; Mature: 4.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSNLHQSGVRLLRMLGRHAETVMDVYLSGAVDEANADAGVLKKLTEAGILWRPEEDEGL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCEECCCCCCCH
RLTRSVRALLEEGLKDERNRQINANVGSALATIKTLANHYKEARSHSDYSAAEAYLADLS
HHHHHHHHHHHHCCHHHHCCEECCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
EHVYAFTENLRYSIRVLWGRINNEFGYVGTISAKIRENELAQSQVSELLNGLELFQFSEL
HHHHHHHHCCHHEEHHEEEHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GEIASDIRELRKLLVTTLQETLSDCTQELSVVQARLLELLGRFRQIQGRTRLLRGWLLYT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEE
DMHPDYEPMDHVAHRKVPMLFNRAEAMLADAHVDVHNQSQEQELMEMVARIKSISRLDLK
CCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCC
PAVKAAETSVVLSAAEDFDIPENPLKQDVDDYFVAVIDSGKRQSALVYLQEKALPWDSES
HHHHHHHHHHHEECHHCCCCCCCHHHHCHHHHEEHHCCCCCCCHHEEEEEHHCCCCCCHH
WIYQVIGGFEGLSEEHKSFFELEPLGEPHPVYTGNFIIRDVELWLS
HHHHHHHHHCCCCHHHHHHEEECCCCCCCCEEECCEEEEEHHHHCC
>Mature Secondary Structure 
SSNLHQSGVRLLRMLGRHAETVMDVYLSGAVDEANADAGVLKKLTEAGILWRPEEDEGL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCEECCCCCCCH
RLTRSVRALLEEGLKDERNRQINANVGSALATIKTLANHYKEARSHSDYSAAEAYLADLS
HHHHHHHHHHHHCCHHHHCCEECCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
EHVYAFTENLRYSIRVLWGRINNEFGYVGTISAKIRENELAQSQVSELLNGLELFQFSEL
HHHHHHHHCCHHEEHHEEEHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GEIASDIRELRKLLVTTLQETLSDCTQELSVVQARLLELLGRFRQIQGRTRLLRGWLLYT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEE
DMHPDYEPMDHVAHRKVPMLFNRAEAMLADAHVDVHNQSQEQELMEMVARIKSISRLDLK
CCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCC
PAVKAAETSVVLSAAEDFDIPENPLKQDVDDYFVAVIDSGKRQSALVYLQEKALPWDSES
HHHHHHHHHHHEECHHCCCCCCCHHHHCHHHHEEHHCCCCCCCHHEEEEEHHCCCCCCHH
WIYQVIGGFEGLSEEHKSFFELEPLGEPHPVYTGNFIIRDVELWLS
HHHHHHHHHCCCCHHHHHHEEECCCCCCCCEEECCEEEEEHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA