Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119773731

Identifier: 119773731

GI number: 119773731

Start: 743359

End: 744024

Strand: Direct

Name: 119773731

Synonym: Sama_0593

Alternate gene names: NA

Gene position: 743359-744024 (Clockwise)

Preceding gene: 119773730

Following gene: 119773732

Centisome position: 17.26

GC content: 56.61

Gene sequence:

>666_bases
ATGTCTGAGGCAAACTTTTCAGGAATTGGTACAGGTCTTGTGGGTCATGGCGCCCTGATCGAACGGCTGCTGCGGGGCGA
GTTTATTTGCCGCGTGACTGACGAAGACGGCTGGCGTGCGCTCAAGTCGCCTGCCGTGCGCGAGCGTATCGAAACCTACC
TCAACCAAATCAACCGCACTGTTGCCAGCGCCGGTGAAGGCGAGGTGTTCTTTTGCGGTTATGCCCAGTTGGGTGAGGCC
GAGCGCAAGGTGATTTCCAGCCAGTTCAAGGATATCTGCCAGGCGCTCATTCCGCTGGTGGAGTGGCTCGTGTTGGTGCA
GGAGGCCTCCGGCCAGGATACGCCCCTCACCGAAGGTGCACCAGTGCGTTTGACTGAGCTTCAGGGCCGTATCGAAGAGA
CCCCGGCGTTTCGCGAGCAGCTTGGCAAACTCAGCCAGTACCGGCTTTTTGGCTCCACTTCAAGTAACGTCGATGCCCAG
CTTAAGCTGGTGTTCAAGCGTCTGGTGGAGCTTGGCTTCCTTACTCGCCCCAATGTGGAAAAACAAATCTACATCGCCAC
GGGTAAGCTTGATTATCTCTATGAAGTGATTCGCTTTATCGATGAAACTGAAGGGCTGAACCTGGAGGCGCAGGCCGAAA
CCGCCACCCAGAGGGAGCTGATATGA

Upstream 100 bases:

>100_bases
ATATCATCAACAAGCAAACCCGCAAGCTGCAGGTGGTGAAGCCCAAGAGCAACCCCATCGCCGATAAGCTGGCCAGCCGT
ATTTCCAGGGAGGCGGTGTA

Downstream 100 bases:

>100_bases
GCAGCAACCTGCACCAGTCCGGGGTGCGGCTGCTGAGGATGCTTGGTCGTCACGCCGAGACAGTGATGGATGTGTACCTG
AGCGGCGCCGTGGACGAGGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 221; Mature: 220

Protein sequence:

>221_residues
MSEANFSGIGTGLVGHGALIERLLRGEFICRVTDEDGWRALKSPAVRERIETYLNQINRTVASAGEGEVFFCGYAQLGEA
ERKVISSQFKDICQALIPLVEWLVLVQEASGQDTPLTEGAPVRLTELQGRIEETPAFREQLGKLSQYRLFGSTSSNVDAQ
LKLVFKRLVELGFLTRPNVEKQIYIATGKLDYLYEVIRFIDETEGLNLEAQAETATQRELI

Sequences:

>Translated_221_residues
MSEANFSGIGTGLVGHGALIERLLRGEFICRVTDEDGWRALKSPAVRERIETYLNQINRTVASAGEGEVFFCGYAQLGEA
ERKVISSQFKDICQALIPLVEWLVLVQEASGQDTPLTEGAPVRLTELQGRIEETPAFREQLGKLSQYRLFGSTSSNVDAQ
LKLVFKRLVELGFLTRPNVEKQIYIATGKLDYLYEVIRFIDETEGLNLEAQAETATQRELI
>Mature_220_residues
SEANFSGIGTGLVGHGALIERLLRGEFICRVTDEDGWRALKSPAVRERIETYLNQINRTVASAGEGEVFFCGYAQLGEAE
RKVISSQFKDICQALIPLVEWLVLVQEASGQDTPLTEGAPVRLTELQGRIEETPAFREQLGKLSQYRLFGSTSSNVDAQL
KLVFKRLVELGFLTRPNVEKQIYIATGKLDYLYEVIRFIDETEGLNLEAQAETATQRELI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24702; Mature: 24571

Theoretical pI: Translated: 4.62; Mature: 4.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEANFSGIGTGLVGHGALIERLLRGEFICRVTDEDGWRALKSPAVRERIETYLNQINRT
CCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHCCHHHHHHHHHHHHHHHHH
VASAGEGEVFFCGYAQLGEAERKVISSQFKDICQALIPLVEWLVLVQEASGQDTPLTEGA
HHCCCCCCEEEECHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PVRLTELQGRIEETPAFREQLGKLSQYRLFGSTSSNVDAQLKLVFKRLVELGFLTRPNVE
CEEHHHHHCHHHCCHHHHHHHCCHHHHEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCC
KQIYIATGKLDYLYEVIRFIDETEGLNLEAQAETATQRELI
CEEEEEECCHHHHHHHHHHHHHCCCCCEEEHHHHHHHHCCC
>Mature Secondary Structure 
SEANFSGIGTGLVGHGALIERLLRGEFICRVTDEDGWRALKSPAVRERIETYLNQINRT
CCCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHCCHHHHHHHHHHHHHHHHH
VASAGEGEVFFCGYAQLGEAERKVISSQFKDICQALIPLVEWLVLVQEASGQDTPLTEGA
HHCCCCCCEEEECHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PVRLTELQGRIEETPAFREQLGKLSQYRLFGSTSSNVDAQLKLVFKRLVELGFLTRPNVE
CEEHHHHHCHHHCCHHHHHHHCCHHHHEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCC
KQIYIATGKLDYLYEVIRFIDETEGLNLEAQAETATQRELI
CEEEEEECCHHHHHHHHHHHHHCCCCCEEEHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA