| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is gltP [H]
Identifier: 119773733
GI number: 119773733
Start: 745648
End: 746892
Strand: Direct
Name: gltP [H]
Synonym: Sama_0595
Alternate gene names: 119773733
Gene position: 745648-746892 (Clockwise)
Preceding gene: 119773732
Following gene: 119773734
Centisome position: 17.32
GC content: 55.82
Gene sequence:
>1245_bases ATGTTCAAATCTCTGTCGGCCAGGATTTTCCTTGGCCTTGCTATCGGACTCCTGTCCGGCACTCTGGTGCAGTATGTGCT GCACGATATCAATTTCTTCTCCGGCACCCTGGTCGAAATCGCCTCTGGCCTTGGCACCATGTTCGTCAACATGATCATGA TGCTGGTGGTGCCACTGGTGTTTGTCAGCATCGTTTGCGGCGTGTGTGAGCTTAAAGATCTCTCCAGCTTCGGTCGCCTC GGTGGCAAGACCTTTGGTTTTTACATCATCAATACCCTGGTCGCTATATTCGCGGCCCTGACGGTTGCGCTGTTGCTGGA ACCCGGCAAGGGCGTGGACATGACCGGCGGCGGAGAGCTCGCCATTACCGCCACCGAGCTGCCGAGCCTGATGGCGCTGG TGGTAGACATAGTGCCCCGTAATCCGGTGGCAGCCTTTATGTCGGGCAATATGCTGCAGGTCATCTTTATGGCCTTGCTG CTTGGCGGCGTCATCAAGTCTCTGGGCGAGCATGTGACCGGCGCCGTATCTGCCTTCCAAACCGCCAATAAAATCATGAT GAAGCTGATTTCGGTGGTGATGCATCTGGCGCCCATTGGTGTTGGCGCACTGATGTTCAAACTGGGTGCTACCCTGGAAG CCGGGGTGTTTCTCAGTGTGATGGAATATCTGGTGCTGATTCTTGGCTTGCTGCTGCTGTGGATTTTCGTGGTTTACCCT TATGCGGTGCAGCTGTTCACCCCGGTGAAAGCCAGCGTGTTTCGTGAGAAAACCCAGGAGCAAATCCTGTTTTCCCTCTC TACCGCCAGCTCCAATGCCACCATTCCGGTGACCATGCGAACCCTCACCGAAAAGCTCAAGGTGAACCGCGCCGTGGCCG GTTTTGGGGTGCCTCTGGGCGCGACCATGAACATGGGCGGTGTGTCCATTTACATTACTGTGGCGATTTTCTTTATCGCC AACGCCTTTGGTATGCCTATCACCATGGAGCAATTGCCGGCGCTTATCTTCAGTATCTTCCTGCTTTCTGTGGGCGCCGG TGGCGTACCCGGCGGCGGCATGGTGATGATTGGCGTGCTTATCCACCAGATGGGCTTGCCGGTGGAAGCCTTTGCGCTGG TGGCCGCGCTGGATAGGCTTATCGATATGGTACTGACTTCCTGTAACGTGGTGGGTGACACCGCGGTGCTGACGATTGTC GACCAAACAGAGCGCCCTCATCAGGTTGCCAGTGATGATGACTGA
Upstream 100 bases:
>100_bases TCCATACATTTTCGTTGAAATTGCCGCTGGCATGTTTCACTATCCGGGAGCGAACGGGGCAGCAGACCCCAGACACAATA ACAACACAGGCATGCAATCT
Downstream 100 bases:
>100_bases GCTGTGATGGAGACAGTGAGCCGACGTTAAGTCGGCTTTTTGTTGTCACTCTAAAACCACCTCCTATGGAGGTGGTGATC GTTCTAGTGGGGCTTTGCCC
Product: sodium:dicarboxylate symporter
Products: L-aspartate [Cytoplasm]; Proton [Cytoplasm]; L-glutamate [Cytoplasm] [C]
Alternate protein names: Glutamate-aspartate carrier protein [H]
Number of amino acids: Translated: 414; Mature: 414
Protein sequence:
>414_residues MFKSLSARIFLGLAIGLLSGTLVQYVLHDINFFSGTLVEIASGLGTMFVNMIMMLVVPLVFVSIVCGVCELKDLSSFGRL GGKTFGFYIINTLVAIFAALTVALLLEPGKGVDMTGGGELAITATELPSLMALVVDIVPRNPVAAFMSGNMLQVIFMALL LGGVIKSLGEHVTGAVSAFQTANKIMMKLISVVMHLAPIGVGALMFKLGATLEAGVFLSVMEYLVLILGLLLLWIFVVYP YAVQLFTPVKASVFREKTQEQILFSLSTASSNATIPVTMRTLTEKLKVNRAVAGFGVPLGATMNMGGVSIYITVAIFFIA NAFGMPITMEQLPALIFSIFLLSVGAGGVPGGGMVMIGVLIHQMGLPVEAFALVAALDRLIDMVLTSCNVVGDTAVLTIV DQTERPHQVASDDD
Sequences:
>Translated_414_residues MFKSLSARIFLGLAIGLLSGTLVQYVLHDINFFSGTLVEIASGLGTMFVNMIMMLVVPLVFVSIVCGVCELKDLSSFGRL GGKTFGFYIINTLVAIFAALTVALLLEPGKGVDMTGGGELAITATELPSLMALVVDIVPRNPVAAFMSGNMLQVIFMALL LGGVIKSLGEHVTGAVSAFQTANKIMMKLISVVMHLAPIGVGALMFKLGATLEAGVFLSVMEYLVLILGLLLLWIFVVYP YAVQLFTPVKASVFREKTQEQILFSLSTASSNATIPVTMRTLTEKLKVNRAVAGFGVPLGATMNMGGVSIYITVAIFFIA NAFGMPITMEQLPALIFSIFLLSVGAGGVPGGGMVMIGVLIHQMGLPVEAFALVAALDRLIDMVLTSCNVVGDTAVLTIV DQTERPHQVASDDD >Mature_414_residues MFKSLSARIFLGLAIGLLSGTLVQYVLHDINFFSGTLVEIASGLGTMFVNMIMMLVVPLVFVSIVCGVCELKDLSSFGRL GGKTFGFYIINTLVAIFAALTVALLLEPGKGVDMTGGGELAITATELPSLMALVVDIVPRNPVAAFMSGNMLQVIFMALL LGGVIKSLGEHVTGAVSAFQTANKIMMKLISVVMHLAPIGVGALMFKLGATLEAGVFLSVMEYLVLILGLLLLWIFVVYP YAVQLFTPVKASVFREKTQEQILFSLSTASSNATIPVTMRTLTEKLKVNRAVAGFGVPLGATMNMGGVSIYITVAIFFIA NAFGMPITMEQLPALIFSIFLLSVGAGGVPGGGMVMIGVLIHQMGLPVEAFALVAALDRLIDMVLTSCNVVGDTAVLTIV DQTERPHQVASDDD
Specific function: This carrier protein is part of the Na(+)-independent, binding-protein-independent glutamate-aspartate transport system [H]
COG id: COG1301
COG function: function code C; Na+/H+-dicarboxylate symporters
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sodium:dicarboxylate (SDF) symporter (TC 2.A.23) family [H]
Homologues:
Organism=Homo sapiens, GI21314632, Length=396, Percent_Identity=28.030303030303, Blast_Score=131, Evalue=1e-30, Organism=Homo sapiens, GI40254478, Length=440, Percent_Identity=25.6818181818182, Blast_Score=128, Evalue=8e-30, Organism=Homo sapiens, GI169790839, Length=425, Percent_Identity=25.6470588235294, Blast_Score=126, Evalue=4e-29, Organism=Homo sapiens, GI5032093, Length=389, Percent_Identity=27.7634961439589, Blast_Score=108, Evalue=1e-23, Organism=Homo sapiens, GI194239697, Length=249, Percent_Identity=30.1204819277108, Blast_Score=106, Evalue=5e-23, Organism=Homo sapiens, GI66773030, Length=261, Percent_Identity=30.2681992337165, Blast_Score=105, Evalue=6e-23, Organism=Homo sapiens, GI4827012, Length=241, Percent_Identity=31.5352697095436, Blast_Score=103, Evalue=3e-22, Organism=Homo sapiens, GI223468566, Length=279, Percent_Identity=29.0322580645161, Blast_Score=99, Evalue=5e-21, Organism=Homo sapiens, GI223468564, Length=270, Percent_Identity=28.8888888888889, Blast_Score=99, Evalue=8e-21, Organism=Homo sapiens, GI262359914, Length=365, Percent_Identity=25.2054794520548, Blast_Score=86, Evalue=6e-17, Organism=Homo sapiens, GI301601644, Length=122, Percent_Identity=35.2459016393443, Blast_Score=83, Evalue=4e-16, Organism=Escherichia coli, GI1790514, Length=414, Percent_Identity=28.5024154589372, Blast_Score=168, Evalue=5e-43, Organism=Escherichia coli, GI1789947, Length=426, Percent_Identity=27.4647887323944, Blast_Score=148, Evalue=6e-37, Organism=Escherichia coli, GI1788024, Length=433, Percent_Identity=29.0993071593533, Blast_Score=100, Evalue=2e-22, Organism=Escherichia coli, GI1789473, Length=279, Percent_Identity=29.7491039426523, Blast_Score=95, Evalue=8e-21, Organism=Caenorhabditis elegans, GI71983106, Length=432, Percent_Identity=28.2407407407407, Blast_Score=147, Evalue=7e-36, Organism=Caenorhabditis elegans, GI71983099, Length=432, Percent_Identity=28.2407407407407, Blast_Score=147, Evalue=1e-35, Organism=Caenorhabditis elegans, GI17537407, Length=387, Percent_Identity=27.390180878553, Blast_Score=132, Evalue=5e-31, Organism=Caenorhabditis elegans, GI71996953, Length=427, Percent_Identity=26.6978922716628, Blast_Score=129, Evalue=4e-30, Organism=Caenorhabditis elegans, GI193206505, Length=457, Percent_Identity=24.945295404814, Blast_Score=120, Evalue=1e-27, Organism=Caenorhabditis elegans, GI17541374, Length=414, Percent_Identity=26.0869565217391, Blast_Score=119, Evalue=3e-27, Organism=Caenorhabditis elegans, GI193206654, Length=424, Percent_Identity=25, Blast_Score=114, Evalue=7e-26, Organism=Drosophila melanogaster, GI24583025, Length=440, Percent_Identity=25.6818181818182, Blast_Score=104, Evalue=1e-22, Organism=Drosophila melanogaster, GI17137668, Length=440, Percent_Identity=25.6818181818182, Blast_Score=104, Evalue=1e-22, Organism=Drosophila melanogaster, GI24583023, Length=440, Percent_Identity=25.6818181818182, Blast_Score=104, Evalue=1e-22, Organism=Drosophila melanogaster, GI281360481, Length=305, Percent_Identity=27.5409836065574, Blast_Score=88, Evalue=9e-18, Organism=Drosophila melanogaster, GI281360483, Length=305, Percent_Identity=27.5409836065574, Blast_Score=88, Evalue=9e-18, Organism=Drosophila melanogaster, GI17137666, Length=305, Percent_Identity=27.5409836065574, Blast_Score=88, Evalue=9e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001991 - InterPro: IPR018107 [H]
Pfam domain/function: PF00375 SDF [H]
EC number: NA
Molecular weight: Translated: 43795; Mature: 43795
Theoretical pI: Translated: 5.63; Mature: 5.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 5.8 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 5.8 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFKSLSARIFLGLAIGLLSGTLVQYVLHDINFFSGTLVEIASGLGTMFVNMIMMLVVPLV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH FVSIVCGVCELKDLSSFGRLGGKTFGFYIINTLVAIFAALTVALLLEPGKGVDMTGGGEL HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCE AITATELPSLMALVVDIVPRNPVAAFMSGNMLQVIFMALLLGGVIKSLGEHVTGAVSAFQ EEEHHHHHHHHHHHHHHCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TANKIMMKLISVVMHLAPIGVGALMFKLGATLEAGVFLSVMEYLVLILGLLLLWIFVVYP HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YAVQLFTPVKASVFREKTQEQILFSLSTASSNATIPVTMRTLTEKLKVNRAVAGFGVPLG HHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEEEHHHHHHHHHHHHHHHCCCCCCC ATMNMGGVSIYITVAIFFIANAFGMPITMEQLPALIFSIFLLSVGAGGVPGGGMVMIGVL CCCCCCCHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH IHQMGLPVEAFALVAALDRLIDMVLTSCNVVGDTAVLTIVDQTERPHQVASDDD HHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCC >Mature Secondary Structure MFKSLSARIFLGLAIGLLSGTLVQYVLHDINFFSGTLVEIASGLGTMFVNMIMMLVVPLV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH FVSIVCGVCELKDLSSFGRLGGKTFGFYIINTLVAIFAALTVALLLEPGKGVDMTGGGEL HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCE AITATELPSLMALVVDIVPRNPVAAFMSGNMLQVIFMALLLGGVIKSLGEHVTGAVSAFQ EEEHHHHHHHHHHHHHHCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TANKIMMKLISVVMHLAPIGVGALMFKLGATLEAGVFLSVMEYLVLILGLLLLWIFVVYP HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YAVQLFTPVKASVFREKTQEQILFSLSTASSNATIPVTMRTLTEKLKVNRAVAGFGVPLG HHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEEEHHHHHHHHHHHHHHHCCCCCCC ATMNMGGVSIYITVAIFFIANAFGMPITMEQLPALIFSIFLLSVGAGGVPGGGMVMIGVL CCCCCCCHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH IHQMGLPVEAFALVAALDRLIDMVLTSCNVVGDTAVLTIVDQTERPHQVASDDD HHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: L-aspartate [Periplasm]; Proton [Periplasm]; L-glutamate [Periplasm] [C]
Specific reaction: Proton [Periplasm] + L-aspartate [Periplasm] = Proton [Cytoplasm] + L-aspartate [Cytoplasm] Proton [Periplasm] + L-glutamate [Periplasm] = Proton [Cytoplasm] + L-glutamate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1971622; 1551855; 8265357; 9278503 [H]