Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119773688

Identifier: 119773688

GI number: 119773688

Start: 674969

End: 675589

Strand: Direct

Name: 119773688

Synonym: Sama_0548

Alternate gene names: NA

Gene position: 674969-675589 (Clockwise)

Preceding gene: 119773686

Following gene: 119773690

Centisome position: 15.67

GC content: 50.24

Gene sequence:

>621_bases
ATGAAGGTGCCTGAATGGAATGTCCCGGGGGTTGAATCACTGAAAGCCTGGGGGTTTAAAAGCATGCTTTGGCTGCTGAT
AGCGACCCTGACATTGAAATTTGCGCCGCAATCCTGGCTGGCGACTTTGCATCTTGACCAGTGGGTCATTCAGGAATCGG
CCTTGATAGGTCTAGGATTGATTGTTGCCTGTGCTTTTTTTGCATCGCTTTTGGCCAATTTTTTATTGGACGAGGCTATC
AGTTACCTGGGGACCAAGCGGAAGACAGAAGTGATTGAGCATAAGGTCAAATTGCTCGATCCCGCTGAGCGTGCGCTGCT
CAGAGAATTCTTTTTACAGGGAAAAACTATTCTGACCCTGCCCGTAGAAGAGTTGGCAGTGCGCAGCCTGGTAGAGACCA
ATATTCTCGAGTGCCTCGGAAATGTGAAGCACTATGCCATCCAGGGGTCAACGGCCGATTACAAGATAAGTATGCTGGCG
AGAGAGCATCTGAACCGAAATGTACTCAGATTGCCCAATGGGGAGCTGAGTCAGGAAGATATGCAGAACCTGATAAAAGC
GCGTCCTGGATTTGTAGGTAGCGTGGTATCACACCGCAAGCCACCTCAGCGCGCAGCCTGA

Upstream 100 bases:

>100_bases
AATTCTGCAACCTGAGTACAAATTGACATATCTGTTAAGGCTGGCATTTAACTTGCTACGAGTGATCAGAAGTTCAATTT
TTTGACGGAAGAGGTGTGTG

Downstream 100 bases:

>100_bases
GGCTCGAAGAAGAAAACACAGACATAAAAAGGGGGGCCATTCGGCCCCCTAATTCACTCTTGAAACATGCACAGTTAAGA
ACATTGAAAGCAAAAACTAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 206; Mature: 206

Protein sequence:

>206_residues
MKVPEWNVPGVESLKAWGFKSMLWLLIATLTLKFAPQSWLATLHLDQWVIQESALIGLGLIVACAFFASLLANFLLDEAI
SYLGTKRKTEVIEHKVKLLDPAERALLREFFLQGKTILTLPVEELAVRSLVETNILECLGNVKHYAIQGSTADYKISMLA
REHLNRNVLRLPNGELSQEDMQNLIKARPGFVGSVVSHRKPPQRAA

Sequences:

>Translated_206_residues
MKVPEWNVPGVESLKAWGFKSMLWLLIATLTLKFAPQSWLATLHLDQWVIQESALIGLGLIVACAFFASLLANFLLDEAI
SYLGTKRKTEVIEHKVKLLDPAERALLREFFLQGKTILTLPVEELAVRSLVETNILECLGNVKHYAIQGSTADYKISMLA
REHLNRNVLRLPNGELSQEDMQNLIKARPGFVGSVVSHRKPPQRAA
>Mature_206_residues
MKVPEWNVPGVESLKAWGFKSMLWLLIATLTLKFAPQSWLATLHLDQWVIQESALIGLGLIVACAFFASLLANFLLDEAI
SYLGTKRKTEVIEHKVKLLDPAERALLREFFLQGKTILTLPVEELAVRSLVETNILECLGNVKHYAIQGSTADYKISMLA
REHLNRNVLRLPNGELSQEDMQNLIKARPGFVGSVVSHRKPPQRAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23097; Mature: 23097

Theoretical pI: Translated: 9.15; Mature: 9.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVPEWNVPGVESLKAWGFKSMLWLLIATLTLKFAPQSWLATLHLDQWVIQESALIGLGL
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
IVACAFFASLLANFLLDEAISYLGTKRKTEVIEHKVKLLDPAERALLREFFLQGKTILTL
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCEEEEE
PVEELAVRSLVETNILECLGNVKHYAIQGSTADYKISMLAREHLNRNVLRLPNGELSQED
CHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHCCCEEECCCCCCCHHH
MQNLIKARPGFVGSVVSHRKPPQRAA
HHHHHHHCCCHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MKVPEWNVPGVESLKAWGFKSMLWLLIATLTLKFAPQSWLATLHLDQWVIQESALIGLGL
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
IVACAFFASLLANFLLDEAISYLGTKRKTEVIEHKVKLLDPAERALLREFFLQGKTILTL
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCEEEEE
PVEELAVRSLVETNILECLGNVKHYAIQGSTADYKISMLAREHLNRNVLRLPNGELSQED
CHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHCCCEEECCCCCCCHHH
MQNLIKARPGFVGSVVSHRKPPQRAA
HHHHHHHCCCHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA