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The map label for this gene is yacF [C]

Identifier: 119773506

GI number: 119773506

Start: 442590

End: 443324

Strand: Reverse

Name: yacF [C]

Synonym: Sama_0365

Alternate gene names: 119773506

Gene position: 443324-442590 (Counterclockwise)

Preceding gene: 119773507

Following gene: 119773505

Centisome position: 10.3

GC content: 49.25

Gene sequence:

>735_bases
ATGACTGAACTGATATATGAGCAACCTCTGAACGAAAAAATCCGCAGCTATCTGCGGCTCGAATATCTCGCCCAGCAGGT
GCAACATAATCTGGAAAACGACCATCAGCAGCGCTGTTTCTATCCTTTATTTTCTTTACTCGAATTAAATGAACGTTGCG
ATTACCGTGGCGATCTTCTTAAAGAAATAGACAAACAACTCTTTATTCTCGCCAAGTGGCAACTATTACCCCACGTTGAT
GCCTCCCAAGTCCAAAATGTCGTTGATGGCTTATCTAAAGCCAGAGAACAGCTCCAGAATCCTTCACGAATTGGTAGCGC
CCTGAAACAGGATAGATTTTTAAGTGCATTACGGCAGCGATTCGGTATGCCCGGCGCTTGTTGTAACTTCGACTTACCTC
AACTGCATTATTGGCTCGCCAAGCCATGGGATGAGCGCAAAGGTGAATACCTGCAGTGGGTTGAACATTTTGCTCCCCTG
CTTACCCCCGTCAGCTTGCTTCTCTCCCTCATTCGCAGCACGGCCGAGTATCAGGACGCCACCGCAGCCGGCGGCTTCTA
TCAGGGGACCAATGCCCAGCCACTCTCGCTCATTCGGGTGAAGATTGATTCGGCCCAGGGTTGTTATCCCACCATTAGCG
GCCACAAAACCCGCTATGCCATTCACTTCGTTCAATTCGCAGATCAACGTCATTCAGATAAGACCATCGCCTTTAAACTG
GCGACCTGCGCCTGA

Upstream 100 bases:

>100_bases
GACGACATTATAGACAACAGAGGAGAGATAGCCGACCTTAAGGAGCAGGTTAATAGGCTCCACCAGTATTATTTAGCACT
GGCGGCATCAAAAGCACCGC

Downstream 100 bases:

>100_bases
AGGCTTTACCATAAGGCCTTCCCCATTTTGGGATTGTTATTCCATCCAAAAGGTTTTTCTTATGACATTGACGGTTAAGT
GCCCCCAGTGCCAAAAGCCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 244; Mature: 243

Protein sequence:

>244_residues
MTELIYEQPLNEKIRSYLRLEYLAQQVQHNLENDHQQRCFYPLFSLLELNERCDYRGDLLKEIDKQLFILAKWQLLPHVD
ASQVQNVVDGLSKAREQLQNPSRIGSALKQDRFLSALRQRFGMPGACCNFDLPQLHYWLAKPWDERKGEYLQWVEHFAPL
LTPVSLLLSLIRSTAEYQDATAAGGFYQGTNAQPLSLIRVKIDSAQGCYPTISGHKTRYAIHFVQFADQRHSDKTIAFKL
ATCA

Sequences:

>Translated_244_residues
MTELIYEQPLNEKIRSYLRLEYLAQQVQHNLENDHQQRCFYPLFSLLELNERCDYRGDLLKEIDKQLFILAKWQLLPHVD
ASQVQNVVDGLSKAREQLQNPSRIGSALKQDRFLSALRQRFGMPGACCNFDLPQLHYWLAKPWDERKGEYLQWVEHFAPL
LTPVSLLLSLIRSTAEYQDATAAGGFYQGTNAQPLSLIRVKIDSAQGCYPTISGHKTRYAIHFVQFADQRHSDKTIAFKL
ATCA
>Mature_243_residues
TELIYEQPLNEKIRSYLRLEYLAQQVQHNLENDHQQRCFYPLFSLLELNERCDYRGDLLKEIDKQLFILAKWQLLPHVDA
SQVQNVVDGLSKAREQLQNPSRIGSALKQDRFLSALRQRFGMPGACCNFDLPQLHYWLAKPWDERKGEYLQWVEHFAPLL
TPVSLLLSLIRSTAEYQDATAAGGFYQGTNAQPLSLIRVKIDSAQGCYPTISGHKTRYAIHFVQFADQRHSDKTIAFKLA
TCA

Specific function: Unknown

COG id: COG4582

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0289 family [H]

Homologues:

Organism=Escherichia coli, GI1786291, Length=246, Percent_Identity=37.8048780487805, Blast_Score=174, Evalue=4e-45,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009777 [H]

Pfam domain/function: PF07072 DUF1342 [H]

EC number: NA

Molecular weight: Translated: 28174; Mature: 28042

Theoretical pI: Translated: 7.86; Mature: 7.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTELIYEQPLNEKIRSYLRLEYLAQQVQHNLENDHQQRCFYPLFSLLELNERCDYRGDLL
CCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHH
KEIDKQLFILAKWQLLPHVDASQVQNVVDGLSKAREQLQNPSRIGSALKQDRFLSALRQR
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
FGMPGACCNFDLPQLHYWLAKPWDERKGEYLQWVEHFAPLLTPVSLLLSLIRSTAEYQDA
CCCCCCCCCCCCHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TAAGGFYQGTNAQPLSLIRVKIDSAQGCYPTISGHKTRYAIHFVQFADQRHSDKTIAFKL
HHCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEE
ATCA
ECCC
>Mature Secondary Structure 
TELIYEQPLNEKIRSYLRLEYLAQQVQHNLENDHQQRCFYPLFSLLELNERCDYRGDLL
CCCHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHH
KEIDKQLFILAKWQLLPHVDASQVQNVVDGLSKAREQLQNPSRIGSALKQDRFLSALRQR
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
FGMPGACCNFDLPQLHYWLAKPWDERKGEYLQWVEHFAPLLTPVSLLLSLIRSTAEYQDA
CCCCCCCCCCCCHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TAAGGFYQGTNAQPLSLIRVKIDSAQGCYPTISGHKTRYAIHFVQFADQRHSDKTIAFKL
HHCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEE
ATCA
ECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12368813 [H]