| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
Click here to switch to the map view.
The map label for this gene is coaE [H]
Identifier: 119773507
GI number: 119773507
Start: 443317
End: 443934
Strand: Reverse
Name: coaE [H]
Synonym: Sama_0366
Alternate gene names: 119773507
Gene position: 443934-443317 (Counterclockwise)
Preceding gene: 119773508
Following gene: 119773506
Centisome position: 10.31
GC content: 48.71
Gene sequence:
>618_bases ATGGCCGAGTTTATTCTGGGCCTCACCGGCGGAATCGGTAGCGGCAAGACAACTGTTGCTAACCTCTTTCACGAACAAGG CATTGAACTGGTTGATGCCGATGTTATCGCCCGTGAAGTGGTCGAGTACGGTTCAGTTGGGCTCAAGGCGATTGAAGACC ACTTCGGTAGTGACATTCTCCAAGCCGATGGCAGTCTCGATCGTGCCAAGCTGAGAGAGCGGATTTTTACCGATGAATCT GAGCGGCTCTGGCTGAACAACTTACTTCACCCCATGATTCGCCAAACCATGCTGTCGTCTGCAAAAAATGCTGATTCAGA TTATGTTATTTTGGTTGTGCCCTTGCTATTTGAGAATGGGTTGGATAGCTTAGTTGATCGAACTTTGGTGGTTGATATTT CACCTGATTTACAAATCCAACGCACCGTCGAACGAGATAACGTGAGCGAGGCCCAAATCGCCAACATTATCGCCAGCCAA ATCAGCCGTGAAGAGAGGCTGCAAAAAGCCGACGACATTATAGACAACAGAGGAGAGATAGCCGACCTTAAGGAGCAGGT TAATAGGCTCCACCAGTATTATTTAGCACTGGCGGCATCAAAAGCACCGCATGACTGA
Upstream 100 bases:
>100_bases GTGAAAATCCCATCCCATTTGGTCCCTATATCGCGGCCGCTGGCTGGATAGCACTTATTTGGGGACAAGATATTGTCAGC TGGTATCTGGGTTCTCTTTG
Downstream 100 bases:
>100_bases ACTGATATATGAGCAACCTCTGAACGAAAAAATCCGCAGCTATCTGCGGCTCGAATATCTCGCCCAGCAGGTGCAACATA ATCTGGAAAACGACCATCAG
Product: dephospho-CoA kinase
Products: NA
Alternate protein names: Dephosphocoenzyme A kinase [H]
Number of amino acids: Translated: 205; Mature: 204
Protein sequence:
>205_residues MAEFILGLTGGIGSGKTTVANLFHEQGIELVDADVIAREVVEYGSVGLKAIEDHFGSDILQADGSLDRAKLRERIFTDES ERLWLNNLLHPMIRQTMLSSAKNADSDYVILVVPLLFENGLDSLVDRTLVVDISPDLQIQRTVERDNVSEAQIANIIASQ ISREERLQKADDIIDNRGEIADLKEQVNRLHQYYLALAASKAPHD
Sequences:
>Translated_205_residues MAEFILGLTGGIGSGKTTVANLFHEQGIELVDADVIAREVVEYGSVGLKAIEDHFGSDILQADGSLDRAKLRERIFTDES ERLWLNNLLHPMIRQTMLSSAKNADSDYVILVVPLLFENGLDSLVDRTLVVDISPDLQIQRTVERDNVSEAQIANIIASQ ISREERLQKADDIIDNRGEIADLKEQVNRLHQYYLALAASKAPHD >Mature_204_residues AEFILGLTGGIGSGKTTVANLFHEQGIELVDADVIAREVVEYGSVGLKAIEDHFGSDILQADGSLDRAKLRERIFTDESE RLWLNNLLHPMIRQTMLSSAKNADSDYVILVVPLLFENGLDSLVDRTLVVDISPDLQIQRTVERDNVSEAQIANIIASQI SREERLQKADDIIDNRGEIADLKEQVNRLHQYYLALAASKAPHD
Specific function: Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A [H]
COG id: COG0237
COG function: function code H; Dephospho-CoA kinase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 DPCK (dephospho-CoA kinase) domain [H]
Homologues:
Organism=Homo sapiens, GI191252797, Length=192, Percent_Identity=34.8958333333333, Blast_Score=112, Evalue=3e-25, Organism=Homo sapiens, GI191252795, Length=192, Percent_Identity=34.8958333333333, Blast_Score=112, Evalue=3e-25, Organism=Homo sapiens, GI205277394, Length=190, Percent_Identity=26.8421052631579, Blast_Score=77, Evalue=1e-14, Organism=Homo sapiens, GI110227607, Length=189, Percent_Identity=25.3968253968254, Blast_Score=77, Evalue=1e-14, Organism=Homo sapiens, GI110227605, Length=190, Percent_Identity=26.8421052631579, Blast_Score=77, Evalue=1e-14, Organism=Homo sapiens, GI110227603, Length=190, Percent_Identity=26.8421052631579, Blast_Score=77, Evalue=1e-14, Organism=Homo sapiens, GI110227601, Length=190, Percent_Identity=26.8421052631579, Blast_Score=77, Evalue=1e-14, Organism=Escherichia coli, GI1786292, Length=196, Percent_Identity=52.0408163265306, Blast_Score=209, Evalue=1e-55, Organism=Caenorhabditis elegans, GI17554944, Length=191, Percent_Identity=34.5549738219895, Blast_Score=125, Evalue=2e-29, Organism=Caenorhabditis elegans, GI25143409, Length=189, Percent_Identity=29.6296296296296, Blast_Score=80, Evalue=9e-16, Organism=Saccharomyces cerevisiae, GI6320402, Length=195, Percent_Identity=36.4102564102564, Blast_Score=108, Evalue=8e-25, Organism=Drosophila melanogaster, GI24644728, Length=183, Percent_Identity=33.3333333333333, Blast_Score=117, Evalue=5e-27, Organism=Drosophila melanogaster, GI24658602, Length=192, Percent_Identity=28.6458333333333, Blast_Score=87, Evalue=5e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001977 - InterPro: IPR000764 [H]
Pfam domain/function: PF01121 CoaE [H]
EC number: =2.7.1.24 [H]
Molecular weight: Translated: 22793; Mature: 22662
Theoretical pI: Translated: 4.40; Mature: 4.40
Prosite motif: PS01294 COAE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEFILGLTGGIGSGKTTVANLFHEQGIELVDADVIAREVVEYGSVGLKAIEDHFGSDIL CCCEEEEECCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHH QADGSLDRAKLRERIFTDESERLWLNNLLHPMIRQTMLSSAKNADSDYVILVVPLLFENG HCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHCC LDSLVDRTLVVDISPDLQIQRTVERDNVSEAQIANIIASQISREERLQKADDIIDNRGEI HHHHHCCEEEEECCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH ADLKEQVNRLHQYYLALAASKAPHD HHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure AEFILGLTGGIGSGKTTVANLFHEQGIELVDADVIAREVVEYGSVGLKAIEDHFGSDIL CCEEEEECCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHH QADGSLDRAKLRERIFTDESERLWLNNLLHPMIRQTMLSSAKNADSDYVILVVPLLFENG HCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHCC LDSLVDRTLVVDISPDLQIQRTVERDNVSEAQIANIIASQISREERLQKADDIIDNRGEI HHHHHCCEEEEECCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH ADLKEQVNRLHQYYLALAASKAPHD HHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12368813 [H]