| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is yacG [C]
Identifier: 119773505
GI number: 119773505
Start: 442313
End: 442528
Strand: Reverse
Name: yacG [C]
Synonym: Sama_0364
Alternate gene names: 119773505
Gene position: 442528-442313 (Counterclockwise)
Preceding gene: 119773506
Following gene: 119773504
Centisome position: 10.28
GC content: 49.07
Gene sequence:
>216_bases ATGACATTGACGGTTAAGTGCCCCCAGTGCCAAAAGCCTGTTACCTGGGACGCCTCCTCCGCCTTCAAGCCATTTTGCAG TGAACGCTGCAAACTGATTGACTTAGGAGATTGGGCGTCCGAGAAGCATGCCATTCCAGTAAAAGATGACATCAGCGAAG AGCTGCTGGATCAGCTCGGTTATGAAGAAGCAGACTTCTTTAAAACTGCTGATTGA
Upstream 100 bases:
>100_bases GATAAGACCATCGCCTTTAAACTGGCGACCTGCGCCTGAAGGCTTTACCATAAGGCCTTCCCCATTTTGGGATTGTTATT CCATCCAAAAGGTTTTTCTT
Downstream 100 bases:
>100_bases CCCAAGGCCAATTCCAAAACTTACTATCAGAGAGTCATCTTATGACTAAGCGTGTTCACGTTGCCGTAGGCATCATTAAA CAAGGCTCGCACATCTTGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 71; Mature: 70
Protein sequence:
>71_residues MTLTVKCPQCQKPVTWDASSAFKPFCSERCKLIDLGDWASEKHAIPVKDDISEELLDQLGYEEADFFKTAD
Sequences:
>Translated_71_residues MTLTVKCPQCQKPVTWDASSAFKPFCSERCKLIDLGDWASEKHAIPVKDDISEELLDQLGYEEADFFKTAD >Mature_70_residues TLTVKCPQCQKPVTWDASSAFKPFCSERCKLIDLGDWASEKHAIPVKDDISEELLDQLGYEEADFFKTAD
Specific function: Unknown
COG id: COG3024
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0243 family
Homologues:
Organism=Escherichia coli, GI1786290, Length=52, Percent_Identity=57.6923076923077, Blast_Score=70, Evalue=3e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y364_SHEAM (A1S2G9)
Other databases:
- EMBL: CP000507 - RefSeq: YP_926245.1 - ProteinModelPortal: A1S2G9 - SMR: A1S2G9 - STRING: A1S2G9 - GeneID: 4602620 - GenomeReviews: CP000507_GR - KEGG: saz:Sama_0364 - eggNOG: COG3024 - HOGENOM: HBG552546 - OMA: LTVKCPI - PhylomeDB: A1S2G9 - ProtClustDB: CLSK905736 - HAMAP: MF_00649 - InterPro: IPR005584 - InterPro: IPR013088 - Gene3D: G3DSA:3.30.50.10
Pfam domain/function: PF03884 DUF329
EC number: NA
Molecular weight: Translated: 8041; Mature: 7910
Theoretical pI: Translated: 4.27; Mature: 4.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.6 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 7.0 %Cys+Met (Translated Protein) 5.7 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLTVKCPQCQKPVTWDASSAFKPFCSERCKLIDLGDWASEKHAIPVKDDISEELLDQLG CEEECCCCCCCCCCCCCCCCCCCHHHHCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHCC YEEADFFKTAD CCCCCCEECCC >Mature Secondary Structure TLTVKCPQCQKPVTWDASSAFKPFCSERCKLIDLGDWASEKHAIPVKDDISEELLDQLG EEECCCCCCCCCCCCCCCCCCCHHHHCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHCC YEEADFFKTAD CCCCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA