| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is 119773450
Identifier: 119773450
GI number: 119773450
Start: 375449
End: 375751
Strand: Reverse
Name: 119773450
Synonym: Sama_0309
Alternate gene names: NA
Gene position: 375751-375449 (Counterclockwise)
Preceding gene: 119773451
Following gene: 119773449
Centisome position: 8.73
GC content: 47.19
Gene sequence:
>303_bases ATGAATCACTGCTGCGAGCAAATGAGAGGCCAGGCAAATTACAGGTGTGATCTTCATGCTGATGCACTTGAATGCCCAGA CCACCTAATCAAGTCCTCTGATAAATTCAATGAGTACGGGATAGTTATTCATGACGGTGGTACGTCTTCAATCACGATCC AGTTTTGTCCCTGGTGCGGCGCAAGGCTACCTGAATCAAAGCGTGACCAATGGTTCGATGAGCTAGAAAGGCTCGGATAT GACGACCCACTTGGGCAAGAAATACCTGAAAAGTACAAAAGCAGTGAGTGGTATCGCGCCTAA
Upstream 100 bases:
>100_bases ATAACAAAGCATTTAAGAGTGATTCGCAACGCTTGGCAGTTTCGCTTCGCTCGAGTATAGCCAAGCGCCGCTCACACCTT AATGCGGCGTTAGGCACTAC
Downstream 100 bases:
>100_bases CAAGTGACAGTGGCACTCAGACCATCAATTGTGATTTGATTCGGTTATGAATCATTGCAACCGCTGTCTTAAAAATTACC ATGAATATACGACTTTACAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 100; Mature: 100
Protein sequence:
>100_residues MNHCCEQMRGQANYRCDLHADALECPDHLIKSSDKFNEYGIVIHDGGTSSITIQFCPWCGARLPESKRDQWFDELERLGY DDPLGQEIPEKYKSSEWYRA
Sequences:
>Translated_100_residues MNHCCEQMRGQANYRCDLHADALECPDHLIKSSDKFNEYGIVIHDGGTSSITIQFCPWCGARLPESKRDQWFDELERLGY DDPLGQEIPEKYKSSEWYRA >Mature_100_residues MNHCCEQMRGQANYRCDLHADALECPDHLIKSSDKFNEYGIVIHDGGTSSITIQFCPWCGARLPESKRDQWFDELERLGY DDPLGQEIPEKYKSSEWYRA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11645; Mature: 11645
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 8.0 %Cys+Met (Translated Protein) 6.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 8.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNHCCEQMRGQANYRCDLHADALECPDHLIKSSDKFNEYGIVIHDGGTSSITIQFCPWCG CCHHHHHHCCCCCCEECCCCCHHCCHHHHHHCCCCCCCCCEEEECCCCCEEEEEECCCCC ARLPESKRDQWFDELERLGYDDPLGQEIPEKYKSSEWYRA CCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCC >Mature Secondary Structure MNHCCEQMRGQANYRCDLHADALECPDHLIKSSDKFNEYGIVIHDGGTSSITIQFCPWCG CCHHHHHHCCCCCCEECCCCCHHCCHHHHHHCCCCCCCCCEEEECCCCCEEEEEECCCCC ARLPESKRDQWFDELERLGYDDPLGQEIPEKYKSSEWYRA CCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA