Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119773451

Identifier: 119773451

GI number: 119773451

Start: 375859

End: 376374

Strand: Reverse

Name: 119773451

Synonym: Sama_0310

Alternate gene names: NA

Gene position: 376374-375859 (Counterclockwise)

Preceding gene: 119773452

Following gene: 119773450

Centisome position: 8.74

GC content: 39.92

Gene sequence:

>516_bases
ATGAAAAAGGTAGCCGTTTTTGGAAAGCCCGGTAGCGGAAAATCCACAGTAAGCAAAGCTTTAGCGTTATCGAATGAGCT
CCCGCTTTATCAACTAGACTCAATTGTTTATAAGCCAAATGGTGAGTTCGTAGCACGAGAGGTATTTGATGCCGCACATA
ACGATATTTTGAGTTCAGAATCGTGGATTATTGATGGTTTTGGTCCTATCAGTTCCTTTAACGAGCGTTTAGCGGCAGCT
GATACCCTCGTATACATTGATCTCCCTTACTCTATTAGCTACTGGTTTGTAACTAAACGCTGCTTGAAAGGGCTCTTTAT
CAAGCCTGAGGGTTGGCCTGAAGGGAGCTCAATATTGAAAGGTACATTGAATAGCTATAAGACACTCAAGTTATGCCCTA
AATTCTGGAACGATGAATTCTTATCTAAGCTAATGGGATACTCGAGTACTAAAAAAGTCTACATAATCAAAACAGTGTCT
GAGTTAAATGACTTTGCTTTAGCGAAAACTAAATAG

Upstream 100 bases:

>100_bases
GAATGGTGGGATTTTTGTATGTTTTGAACAAATCAACCCCGCCCTAGAAGGTGGGGTTTCTCTTTCTACCTTTTAGGAAT
CAGCATCTTGGAGGATTCAA

Downstream 100 bases:

>100_bases
CGCGCATATAACAAAGCATTTAAGAGTGATTCGCAACGCTTGGCAGTTTCGCTTCGCTCGAGTATAGCCAAGCGCCGCTC
ACACCTTAATGCGGCGTTAG

Product: hypothetical protein

Products: NA

Alternate protein names: Adenylate Kinase; DNA pology Modulation Protein FlaR; Adenylate Kinase DNA pology Modulator; DNA pology Modulation Kinase FlaR; DNA pology Modulation Protein FlaR-Related Protein; DNA pology Modulation Kinase FlaR-Like Protein; DNA pology Modulation Protein

Number of amino acids: Translated: 171; Mature: 171

Protein sequence:

>171_residues
MKKVAVFGKPGSGKSTVSKALALSNELPLYQLDSIVYKPNGEFVAREVFDAAHNDILSSESWIIDGFGPISSFNERLAAA
DTLVYIDLPYSISYWFVTKRCLKGLFIKPEGWPEGSSILKGTLNSYKTLKLCPKFWNDEFLSKLMGYSSTKKVYIIKTVS
ELNDFALAKTK

Sequences:

>Translated_171_residues
MKKVAVFGKPGSGKSTVSKALALSNELPLYQLDSIVYKPNGEFVAREVFDAAHNDILSSESWIIDGFGPISSFNERLAAA
DTLVYIDLPYSISYWFVTKRCLKGLFIKPEGWPEGSSILKGTLNSYKTLKLCPKFWNDEFLSKLMGYSSTKKVYIIKTVS
ELNDFALAKTK
>Mature_171_residues
MKKVAVFGKPGSGKSTVSKALALSNELPLYQLDSIVYKPNGEFVAREVFDAAHNDILSSESWIIDGFGPISSFNERLAAA
DTLVYIDLPYSISYWFVTKRCLKGLFIKPEGWPEGSSILKGTLNSYKTLKLCPKFWNDEFLSKLMGYSSTKKVYIIKTVS
ELNDFALAKTK

Specific function: Unknown

COG id: COG0563

COG function: function code F; Adenylate kinase and related kinases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19095; Mature: 19095

Theoretical pI: Translated: 9.46; Mature: 9.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKVAVFGKPGSGKSTVSKALALSNELPLYQLDSIVYKPNGEFVAREVFDAAHNDILSSE
CCCEEEEECCCCCHHHHHHHHHHCCCCCCEEECCEEECCCCCCHHHHHHHHHHHHHCCCC
SWIIDGFGPISSFNERLAAADTLVYIDLPYSISYWFVTKRCLKGLFIKPEGWPEGSSILK
CEEEECCCCHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHCCEEECCCCCCCCHHHHH
GTLNSYKTLKLCPKFWNDEFLSKLMGYSSTKKVYIIKTVSELNDFALAKTK
HHHCCHHHHHHCCCCCCHHHHHHHHCCCCCCEEEEEEEHHHHHHHHEECCC
>Mature Secondary Structure
MKKVAVFGKPGSGKSTVSKALALSNELPLYQLDSIVYKPNGEFVAREVFDAAHNDILSSE
CCCEEEEECCCCCHHHHHHHHHHCCCCCCEEECCEEECCCCCCHHHHHHHHHHHHHCCCC
SWIIDGFGPISSFNERLAAADTLVYIDLPYSISYWFVTKRCLKGLFIKPEGWPEGSSILK
CEEEECCCCHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHCCEEECCCCCCCCHHHHH
GTLNSYKTLKLCPKFWNDEFLSKLMGYSSTKKVYIIKTVSELNDFALAKTK
HHHCCHHHHHHCCCCCCHHHHHHHHCCCCCCEEEEEEEHHHHHHHHEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA