| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is 119773449
Identifier: 119773449
GI number: 119773449
Start: 374607
End: 375368
Strand: Reverse
Name: 119773449
Synonym: Sama_0308
Alternate gene names: NA
Gene position: 375368-374607 (Counterclockwise)
Preceding gene: 119773450
Following gene: 119773434
Centisome position: 8.72
GC content: 50.0
Gene sequence:
>762_bases ATGAATATACGACTTTACAGCGACTTACACATCGAATTTGAAGACTTCCATGCTCCAGCCGATGGCGCGGACGTCGTTGT GCTGGCCGGAGACGTAGACGTTGGTGTGAGAGGCATTGACTGGATAGTGCGGCAGGAGTTTAGCTGTCCGGTGATTTATG TGATGGGCAACCATGAGTACTATAACCATCGCTACCCAAGCCTGCTAGGTAAGGTGAAGCAGCATGCTGCTGGCAAGAAT ATTCATATCCTCGAAAACGAGAGTGTTGAGATTGATGGTGTGCGGTTTCATGGTGCCACGCTGTGGGCGGACTTCAAGCT GTTCGGTGACCCTCGGGTGGCTGGTTACGAGTGCCAACAAGTGATGAGGGATTACAAGAAAATCCGCAAAGAACCCTCTT ACTCAAAGTTGAGATCCATTGATGTGGCCAGTATTCATAATCAGTCTCTAAGTTGGCTTGCCGAAAGCCTAGCCAGCTCC AAGAGTTCTGTAAATGTGGTGGTTACTCACCATGCGCCGAGCATGCTGTCGGTTCCAGCGTACTACCAGGACAACTTAGT GACAGCGGCCTATGCTTCCGATTTGAGTGCTTTTATTGATGAGCATAAACCAGACTACTGGCTGCATGGGCATTTACACA CAAGCTCGAATTACTATCTGGGCGCATGCCAGGTTCTGGCTAATCCCAAGGGCTATAAGGGCGAAGTCAATGAAAGCTTT GACCCAAGCTTTAGCCTAACGCTGGCGAAGCGCGGTGTGTGA
Upstream 100 bases:
>100_bases GTGAGTGGTATCGCGCCTAACAAGTGACAGTGGCACTCAGACCATCAATTGTGATTTGATTCGGTTATGAATCATTGCAA CCGCTGTCTTAAAAATTACC
Downstream 100 bases:
>100_bases TTGACCAATACAAAGGCTTGAACAGTAGCTCCTCAAGATTCTTTGAATGGCTTCGACCTTAAGTTGCGCAGCGCCCATTC TATGGGAAAAATGACCCACA
Product: phosphoesterase, related to the Icc protein
Products: NA
Alternate protein names: Ser/Thr Protein Phosphatase Family Protein; Phosphoesterase; Calcineurin-Like Phosphoesterase; Phosphatase; Metallo-Phosphoesterase; Phosphoesterase Related Icc Protein; Phosphoesterases Related Icc Protein
Number of amino acids: Translated: 253; Mature: 253
Protein sequence:
>253_residues MNIRLYSDLHIEFEDFHAPADGADVVVLAGDVDVGVRGIDWIVRQEFSCPVIYVMGNHEYYNHRYPSLLGKVKQHAAGKN IHILENESVEIDGVRFHGATLWADFKLFGDPRVAGYECQQVMRDYKKIRKEPSYSKLRSIDVASIHNQSLSWLAESLASS KSSVNVVVTHHAPSMLSVPAYYQDNLVTAAYASDLSAFIDEHKPDYWLHGHLHTSSNYYLGACQVLANPKGYKGEVNESF DPSFSLTLAKRGV
Sequences:
>Translated_253_residues MNIRLYSDLHIEFEDFHAPADGADVVVLAGDVDVGVRGIDWIVRQEFSCPVIYVMGNHEYYNHRYPSLLGKVKQHAAGKN IHILENESVEIDGVRFHGATLWADFKLFGDPRVAGYECQQVMRDYKKIRKEPSYSKLRSIDVASIHNQSLSWLAESLASS KSSVNVVVTHHAPSMLSVPAYYQDNLVTAAYASDLSAFIDEHKPDYWLHGHLHTSSNYYLGACQVLANPKGYKGEVNESF DPSFSLTLAKRGV >Mature_253_residues MNIRLYSDLHIEFEDFHAPADGADVVVLAGDVDVGVRGIDWIVRQEFSCPVIYVMGNHEYYNHRYPSLLGKVKQHAAGKN IHILENESVEIDGVRFHGATLWADFKLFGDPRVAGYECQQVMRDYKKIRKEPSYSKLRSIDVASIHNQSLSWLAESLASS KSSVNVVVTHHAPSMLSVPAYYQDNLVTAAYASDLSAFIDEHKPDYWLHGHLHTSSNYYLGACQVLANPKGYKGEVNESF DPSFSLTLAKRGV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28390; Mature: 28390
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIRLYSDLHIEFEDFHAPADGADVVVLAGDVDVGVRGIDWIVRQEFSCPVIYVMGNHEY CCEEEEEEEEEEEECCCCCCCCCCEEEEECCCCCCCCHHHHEEECCCCCCEEEEEECCCC YNHRYPSLLGKVKQHAAGKNIHILENESVEIDGVRFHGATLWADFKLFGDPRVAGYECQQ CCCCCHHHHHHHHHHCCCCCEEEEECCCEEEEEEEEECEEEEEEEEEECCCCCCCHHHHH VMRDYKKIRKEPSYSKLRSIDVASIHNQSLSWLAESLASSKSSVNVVVTHHAPSMLSVPA HHHHHHHHHCCCCHHHHHCCCHHHHCCHHHHHHHHHHHCCCCCEEEEEEECCCCEEECCC YYQDNLVTAAYASDLSAFIDEHKPDYWLHGHLHTSSNYYLGACQVLANPKGYKGEVNESF CCCCCEEEEHHHHHHHHHHHCCCCCEEEEEEEECCCCEEEEEEEEEECCCCCCCCCCCCC DPSFSLTLAKRGV CCCEEEEEECCCC >Mature Secondary Structure MNIRLYSDLHIEFEDFHAPADGADVVVLAGDVDVGVRGIDWIVRQEFSCPVIYVMGNHEY CCEEEEEEEEEEEECCCCCCCCCCEEEEECCCCCCCCHHHHEEECCCCCCEEEEEECCCC YNHRYPSLLGKVKQHAAGKNIHILENESVEIDGVRFHGATLWADFKLFGDPRVAGYECQQ CCCCCHHHHHHHHHHCCCCCEEEEECCCEEEEEEEEECEEEEEEEEEECCCCCCCHHHHH VMRDYKKIRKEPSYSKLRSIDVASIHNQSLSWLAESLASSKSSVNVVVTHHAPSMLSVPA HHHHHHHHHCCCCHHHHHCCCHHHHCCHHHHHHHHHHHCCCCCEEEEEEECCCCEEECCC YYQDNLVTAAYASDLSAFIDEHKPDYWLHGHLHTSSNYYLGACQVLANPKGYKGEVNESF CCCCCEEEEHHHHHHHHHHHCCCCCEEEEEEEECCCCEEEEEEEEEECCCCCCCCCCCCC DPSFSLTLAKRGV CCCEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA