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The map label for this gene is yceB [H]

Identifier: 119773394

GI number: 119773394

Start: 289318

End: 289854

Strand: Reverse

Name: yceB [H]

Synonym: Sama_0253

Alternate gene names: 119773394

Gene position: 289854-289318 (Counterclockwise)

Preceding gene: 119773395

Following gene: 119773388

Centisome position: 6.73

GC content: 56.42

Gene sequence:

>537_bases
GTGATCCGTCTACTGGCAGTTTCTGCACTACTGCTGCTGTCTGGCTGCGTTAGCCAGTACAGCATCAGTGAGGGGGAAAT
GGCGTCCTACCTCAATAAGGAGATTGGCCTTGAGGTAAAAGACAACTCCGGCCCCCTGGGCGCCCGGGTGTCGGTCAATC
AGATTGAGGTTAGGCTTGGACATAAGGCGGATACCATGGCGGTTACAGCAACCAGTCTCGCCGAGGTAAAAACGCCGCTC
ATTCCGCTGCGTGCAACCCTTACCACCACCTTTGAAGCCAAGCCATGGTACGATAAACAAGCCCATGGCGTGTACCTGAG
GGACTTACAAATGGTGGATGTGAGCGCCAACCCGGCAGAGCTCAAACGCCTGCTGCAAGACTTAGCCCCCGAGCTGATGC
GGGTTGTGAGAAGCTTCCTCGAGAGTCAGCCTGTTTACGTGCTGGATACCCAGGACAGCGCCCAAGCCAAACTGGCCGAG
ATGACCGAGCGGATCACGGTAAAACCCGGCAAGTTGGTGTTGGAGTTCACCCGCTGA

Upstream 100 bases:

>100_bases
TGCTTGGCCGTACCCGTCGTGAAGAAACGCCGTCGGAGTCTGTACAACTGGCACTGATGCTCACCATCGCCGGTGTTGCC
GCTGGCATGAGGAACACAGG

Downstream 100 bases:

>100_bases
TGGGAGCACCTAAATAATTACTTGGGATAACGGCTGATGGAACTGTAGTCCACAATCACGGCTTCGCCATTAAGCTCACG
GCGCAGCATGTCATAGGCTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 178; Mature: 178

Protein sequence:

>178_residues
MIRLLAVSALLLLSGCVSQYSISEGEMASYLNKEIGLEVKDNSGPLGARVSVNQIEVRLGHKADTMAVTATSLAEVKTPL
IPLRATLTTTFEAKPWYDKQAHGVYLRDLQMVDVSANPAELKRLLQDLAPELMRVVRSFLESQPVYVLDTQDSAQAKLAE
MTERITVKPGKLVLEFTR

Sequences:

>Translated_178_residues
MIRLLAVSALLLLSGCVSQYSISEGEMASYLNKEIGLEVKDNSGPLGARVSVNQIEVRLGHKADTMAVTATSLAEVKTPL
IPLRATLTTTFEAKPWYDKQAHGVYLRDLQMVDVSANPAELKRLLQDLAPELMRVVRSFLESQPVYVLDTQDSAQAKLAE
MTERITVKPGKLVLEFTR
>Mature_178_residues
MIRLLAVSALLLLSGCVSQYSISEGEMASYLNKEIGLEVKDNSGPLGARVSVNQIEVRLGHKADTMAVTATSLAEVKTPL
IPLRATLTTTFEAKPWYDKQAHGVYLRDLQMVDVSANPAELKRLLQDLAPELMRVVRSFLESQPVYVLDTQDSAQAKLAE
MTERITVKPGKLVLEFTR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787302, Length=192, Percent_Identity=28.125, Blast_Score=79, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010835 [H]

Pfam domain/function: PF07273 DUF1439 [H]

EC number: NA

Molecular weight: Translated: 19644; Mature: 19644

Theoretical pI: Translated: 6.54; Mature: 6.54

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRLLAVSALLLLSGCVSQYSISEGEMASYLNKEIGLEVKDNSGPLGARVSVNQIEVRLG
CCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCEEECCCCCCCCCEEEEEEEEEEEC
HKADTMAVTATSLAEVKTPLIPLRATLTTTFEAKPWYDKQAHGVYLRDLQMVDVSANPAE
CCCCCEEEEHHHHHHHHCCCEEEEEEEEEEECCCCCCCCCCCCEEEEEEEEEECCCCHHH
LKRLLQDLAPELMRVVRSFLESQPVYVLDTQDSAQAKLAEMTERITVKPGKLVLEFTR
HHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHEECCCCEEEEEECC
>Mature Secondary Structure
MIRLLAVSALLLLSGCVSQYSISEGEMASYLNKEIGLEVKDNSGPLGARVSVNQIEVRLG
CCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCEEECCCCCCCCCEEEEEEEEEEEC
HKADTMAVTATSLAEVKTPLIPLRATLTTTFEAKPWYDKQAHGVYLRDLQMVDVSANPAE
CCCCCEEEEHHHHHHHHCCCEEEEEEEEEEECCCCCCCCCCCCEEEEEEEEEECCCCHHH
LKRLLQDLAPELMRVVRSFLESQPVYVLDTQDSAQAKLAEMTERITVKPGKLVLEFTR
HHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHEECCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11677609; 2872051 [H]