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The map label for this gene is selD [H]

Identifier: 119773331

GI number: 119773331

Start: 218255

End: 219313

Strand: Reverse

Name: selD [H]

Synonym: Sama_0190

Alternate gene names: 119773331

Gene position: 219313-218255 (Counterclockwise)

Preceding gene: 119773332

Following gene: 119773330

Centisome position: 5.09

GC content: 57.13

Gene sequence:

>1059_bases
ATGTCATCGCAACTTTCACAGCCCATCAAACTGACCGAATACAGCCACGGAGCCGGTTGTGGCTGCAAAATATCGCCCAA
GGTACTGGGTACCATCCTTGAATCGCAGCTGCCAAGCTTTGTTGACCCCAATCTATTGGTTGGCAATGCCAGCCGCGATG
ACGCAGCCGTTTACAAGCTGAATGACACCACCGGCATCATCAGCACCACCGACTTTTTCATGCCCATAGTGGACGACCCC
TTCACCTTCGGCCGTATCGCTGCCACCAATGCCATCAGCGATATCTACGCTATGGGCGGCACCCCCATGATGGCGATTGC
CATTCTGGGTTGGCCTGTGAACAAGCTGCCCGCCGAAGTGGCTCAACAGGTGGTGGATGGTGGCCGTCAGGCCTGTATGG
ATGCCGGAATCATGCTCGCCGGTGGCCACAGCATTGATGCGCCCGAGCCTATTTTCGGTCTGGCCGTGACTGGTCAGCTA
CCGCTGGAGCGCCTGAAACAAAACAATACTGCCAAGGCGGGTGACAAGCTGTACCTCACCAAGCCCATCGGCATTGGTAT
TCTCACGACGGCCCAAAAGCAGAAAAAGCTTGAAGACGCCGATGCCCACATAGCCCCCGAAGCTATGTGCACGCTCAATA
AAATTGGCGCCGATATAGCAACTCTGCCCGGCGTCAGTGCCATGACAGATGTAACGGGTTTTGGATTGGCGGGGCACCTG
CTGGAAATGTGTCAGGGCGCCACTGTGGATGCCGAACTGAACCTTGAGGCAGTTCCACTGCTGGAGCGCGCCGAGCATTA
TCTTGACCTTGGCTGTATACCCGGCGGCACCCACAGAAACTTTGACAGCTACGGCGAGCATCTGCCAAACGTCAGCGAGC
GCGAAAAGGCGCTGCTTTGTGACCCACAAACCAGCGGCGGCCTTCTGGTGGCAGTCTGCGATGAGGCCGAAGCGGCCTTA
TGCGAGCTCCTCAGCAGCCACGGTATAACGCCTGTATGCATTGGCGAGCTGAAGGCGGGCCCGGGTAGACTGCTTCTCAA
ATCCGGTGGTTTGGCATGA

Upstream 100 bases:

>100_bases
GCCTGTCGCTGATCCCGCTATAAGAATCAACACGGCCTCCTTGCATGGAGGCCGTATCTGACTATCATGGTTGCCATTCC
TTTCAGGCAGGCAAATCCGT

Downstream 100 bases:

>100_bases
GTACCAATACCGTCCCCGCCAAGCAATATCGGGAGATCTTCTTAAAAGGTCATCCCATTATGGATGTGCGCGCCCCCATC
GAGTTCAGCAAGGGCGCTTT

Product: selenophosphate synthetase

Products: NA

Alternate protein names: Selenium donor protein; Selenophosphate synthase [H]

Number of amino acids: Translated: 352; Mature: 351

Protein sequence:

>352_residues
MSSQLSQPIKLTEYSHGAGCGCKISPKVLGTILESQLPSFVDPNLLVGNASRDDAAVYKLNDTTGIISTTDFFMPIVDDP
FTFGRIAATNAISDIYAMGGTPMMAIAILGWPVNKLPAEVAQQVVDGGRQACMDAGIMLAGGHSIDAPEPIFGLAVTGQL
PLERLKQNNTAKAGDKLYLTKPIGIGILTTAQKQKKLEDADAHIAPEAMCTLNKIGADIATLPGVSAMTDVTGFGLAGHL
LEMCQGATVDAELNLEAVPLLERAEHYLDLGCIPGGTHRNFDSYGEHLPNVSEREKALLCDPQTSGGLLVAVCDEAEAAL
CELLSSHGITPVCIGELKAGPGRLLLKSGGLA

Sequences:

>Translated_352_residues
MSSQLSQPIKLTEYSHGAGCGCKISPKVLGTILESQLPSFVDPNLLVGNASRDDAAVYKLNDTTGIISTTDFFMPIVDDP
FTFGRIAATNAISDIYAMGGTPMMAIAILGWPVNKLPAEVAQQVVDGGRQACMDAGIMLAGGHSIDAPEPIFGLAVTGQL
PLERLKQNNTAKAGDKLYLTKPIGIGILTTAQKQKKLEDADAHIAPEAMCTLNKIGADIATLPGVSAMTDVTGFGLAGHL
LEMCQGATVDAELNLEAVPLLERAEHYLDLGCIPGGTHRNFDSYGEHLPNVSEREKALLCDPQTSGGLLVAVCDEAEAAL
CELLSSHGITPVCIGELKAGPGRLLLKSGGLA
>Mature_351_residues
SSQLSQPIKLTEYSHGAGCGCKISPKVLGTILESQLPSFVDPNLLVGNASRDDAAVYKLNDTTGIISTTDFFMPIVDDPF
TFGRIAATNAISDIYAMGGTPMMAIAILGWPVNKLPAEVAQQVVDGGRQACMDAGIMLAGGHSIDAPEPIFGLAVTGQLP
LERLKQNNTAKAGDKLYLTKPIGIGILTTAQKQKKLEDADAHIAPEAMCTLNKIGADIATLPGVSAMTDVTGFGLAGHLL
EMCQGATVDAELNLEAVPLLERAEHYLDLGCIPGGTHRNFDSYGEHLPNVSEREKALLCDPQTSGGLLVAVCDEAEAALC
ELLSSHGITPVCIGELKAGPGRLLLKSGGLA

Specific function: Synthesizes selenophosphate from selenide and ATP [H]

COG id: COG0709

COG function: function code E; Selenophosphate synthase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the selenophosphate synthase 1 family. Class I subfamily [H]

Homologues:

Organism=Homo sapiens, GI24797148, Length=356, Percent_Identity=28.0898876404494, Blast_Score=110, Evalue=3e-24,
Organism=Homo sapiens, GI15011844, Length=368, Percent_Identity=25.8152173913043, Blast_Score=92, Evalue=7e-19,
Organism=Escherichia coli, GI1788062, Length=329, Percent_Identity=64.741641337386, Blast_Score=432, Evalue=1e-122,
Organism=Caenorhabditis elegans, GI17543426, Length=362, Percent_Identity=27.9005524861878, Blast_Score=116, Evalue=2e-26,
Organism=Drosophila melanogaster, GI24653602, Length=370, Percent_Identity=28.1081081081081, Blast_Score=108, Evalue=6e-24,
Organism=Drosophila melanogaster, GI24653604, Length=370, Percent_Identity=28.1081081081081, Blast_Score=108, Evalue=6e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000728
- InterPro:   IPR010918
- InterPro:   IPR016188
- InterPro:   IPR004536
- InterPro:   IPR023061 [H]

Pfam domain/function: PF00586 AIRS; PF02769 AIRS_C [H]

EC number: =2.7.9.3 [H]

Molecular weight: Translated: 36789; Mature: 36658

Theoretical pI: Translated: 4.60; Mature: 4.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSQLSQPIKLTEYSHGAGCGCKISPKVLGTILESQLPSFVDPNLLVGNASRDDAAVYKL
CCCCCCCCEEEEECCCCCCCCCEECHHHHHHHHHHHCCCCCCCCEEEECCCCCCCEEEEE
NDTTGIISTTDFFMPIVDDPFTFGRIAATNAISDIYAMGGTPMMAIAILGWPVNKLPAEV
CCCCCEEEEHHEEEECCCCCCCCCHHHHHHHHHHHHHCCCCHHEEHEECCCCHHHHHHHH
AQQVVDGGRQACMDAGIMLAGGHSIDAPEPIFGLAVTGQLPLERLKQNNTAKAGDKLYLT
HHHHHHCCHHHHHHCCEEEECCCCCCCCCCEEEEEEECCCHHHHHHCCCCCCCCCEEEEE
KPIGIGILTTAQKQKKLEDADAHIAPEAMCTLNKIGADIATLPGVSAMTDVTGFGLAGHL
CCCCCEEEECCHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHCCCCHHHHHHHCCCHHHHH
LEMCQGATVDAELNLEAVPLLERAEHYLDLGCIPGGTHRNFDSYGEHLPNVSEREKALLC
HHHHCCCCCCCCCCCHHHHHHHHHHHHEECCCCCCCCCCCHHHHHHHCCCCCCCCCEEEE
DPQTSGGLLVAVCDEAEAALCELLSSHGITPVCIGELKAGPGRLLLKSGGLA
CCCCCCCEEEEEECCHHHHHHHHHHHCCCCEEEEECCCCCCCEEEEECCCCC
>Mature Secondary Structure 
SSQLSQPIKLTEYSHGAGCGCKISPKVLGTILESQLPSFVDPNLLVGNASRDDAAVYKL
CCCCCCCEEEEECCCCCCCCCEECHHHHHHHHHHHCCCCCCCCEEEECCCCCCCEEEEE
NDTTGIISTTDFFMPIVDDPFTFGRIAATNAISDIYAMGGTPMMAIAILGWPVNKLPAEV
CCCCCEEEEHHEEEECCCCCCCCCHHHHHHHHHHHHHCCCCHHEEHEECCCCHHHHHHHH
AQQVVDGGRQACMDAGIMLAGGHSIDAPEPIFGLAVTGQLPLERLKQNNTAKAGDKLYLT
HHHHHHCCHHHHHHCCEEEECCCCCCCCCCEEEEEEECCCHHHHHHCCCCCCCCCEEEEE
KPIGIGILTTAQKQKKLEDADAHIAPEAMCTLNKIGADIATLPGVSAMTDVTGFGLAGHL
CCCCCEEEECCHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHCCCCHHHHHHHCCCHHHHH
LEMCQGATVDAELNLEAVPLLERAEHYLDLGCIPGGTHRNFDSYGEHLPNVSEREKALLC
HHHHCCCCCCCCCCCHHHHHHHHHHHHEECCCCCCCCCCCHHHHHHHCCCCCCCCCEEEE
DPQTSGGLLVAVCDEAEAALCELLSSHGITPVCIGELKAGPGRLLLKSGGLA
CCCCCCCEEEEEECCHHHHHHHHHHHCCCCEEEEECCCCCCCEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA