Click here to switch to the map view.

The map label for this gene is 119773332

Identifier: 119773332

GI number: 119773332

Start: 219402

End: 220520

Strand: Reverse

Name: 119773332

Synonym: Sama_0191

Alternate gene names: NA

Gene position: 220520-219402 (Counterclockwise)

Preceding gene: 119773334

Following gene: 119773331

Centisome position: 5.12

GC content: 52.37

Gene sequence:

>1119_bases
ATGGAAACAATAATGAATAAACCCCCCATCATTTGGCTGAACCTCTCTCTGTTCGTTCTAACCCTTGGCGGTGCAATTAC
CCTGGTTCCGTGGCGAGCTATCACCCATGGCTTTGACGCCGTTGAATGGGTCGCCTTTGTGGTCTTGGTATTTTACAGCG
GCCTCTCTATTACTGCGGGCTATCACAGGCTTTGGTCACACAAGGCGTACAAGGCCAATGCCGTGGTACGCTTCTTTTAT
GCACTCGGTGGTGCACTGGCATTGCAAAACAGCGCCTTGCACTGGTCTTCGGATCACCGGGTGCACCACAAGCATGTCGA
CAACAACGACAAAGACCCCTATTCAGCGAACATGGGTTTCTGGTATAGCCATATCGGCTGGATGCTGAGGGAGTATCAGG
CCCACAGATATCACGACTACAACAACGTACGCGATCTTCAAAACGATACTATCGTCATGTGGCAACACAAACATTATTTG
CTATTGACCATTTTGATGAATGTGGGTCTGCCGGCGCTGCTGGGCTGGTTTCATGGTGATGTGCTGTCGATGTTACTGTT
GGCAGGTTTGGCGCGTTTGGTGCTGGTTCACCACTGCACTTTCTTTATCAACTCACTGGCGCACATCTGGGGCTCGCAGC
CTTATACCGACAAGAACACCGCCCGCGACAATCCGCTGCTGGCGTTTTTAACCTATGGCGAGGGCTACCACAACTTCCAC
CATATCTTTGAAAACGACTACCGCAATGGTATCCACTGGTGGGACTACGACCCAACCAAGTGGCTTATCAAGGGCTTGTC
CTGGTGTGGATTGGCCGGTGACTTACGCAAAGTGCCACAGGAACGTATCGAAAGCGCCAAACTGCAGATGCAGCTCAAGC
GCAGCCAACATCGCATTGCCGGCCATAAAGATGCCGAAGAGCTACTGGAATCCCTGCAGCTGGAATACGAGCGTCTGAAG
CAACAGCTCCTGGCCTACTACGAAGCTAAAAAAGAACTGCTGGAAGCCCGTCGTGCCGAGCTTTGTGTAAAAGAACTCTC
ACCCAAGGTAGCGGAGCTGAAGAACCGCCTGCGTCTGGCGCAGCAAAACTGGGCATCAGTGACAGCCGCCTGTCGCTGA

Upstream 100 bases:

>100_bases
GGATAATAACCCTTTTGCCCCTAAAACACAGCCCCGCCTTCCTTGACCTTGGTCATCAGCTCGTCTAAATTAGCTTACAG
CTGTACGCTTAAAGCGATAT

Downstream 100 bases:

>100_bases
TCCCGCTATAAGAATCAACACGGCCTCCTTGCATGGAGGCCGTATCTGACTATCATGGTTGCCATTCCTTTCAGGCAGGC
AAATCCGTATGTCATCGCAA

Product: stearoyl-CoA 9-desaturase

Products: NA

Alternate protein names: Fatty Acid Desaturase; Delta-9 Acyl-Phospholipid Desaturase; Fatty-Acid Desaturase; Delta-9 Desaturase; Acyl-CoA Desaturase; Fatty Acid Desaturase Subfamily; Delta 9 Acyl-Lipid Fatty Acid Desaturase; Fatty Acid Desaturase Family Proteiin; Fatty Acid Desaturase Domain Protein; Fatty Acid Desaturase Family Protein; Palmitoyl-Monogalactosyldiacylglycerol Delta-7 Desaturase; Stearoyl-CoA Desaturase; Delta-9 Acyl-Lipid Desaturase; Delta 9 Acyl-Lipid Desaturase; Membrane-Bound Fatty Acid Desaturase; Long Chain Acyl-CoA Desaturase; Delta-9 Fatty Acid Desaturase; Delta-9 Fatty Ac Id Desaturase; Fatty Acid-CoA Desaturase; Acyl-Coa Desaturase; Delta-9-Acyl-Lipid Fatty Acid Desaturase; Fatty Acid Desaturase Protein; Syn-2 Delta 9 Acyl-Lipid Fatty Acid Desaturase; Eucaryotic Stearoyl-CoA 9-Desaturase; Stearoyl/Acyl-CoA Desaturase

Number of amino acids: Translated: 372; Mature: 372

Protein sequence:

>372_residues
METIMNKPPIIWLNLSLFVLTLGGAITLVPWRAITHGFDAVEWVAFVVLVFYSGLSITAGYHRLWSHKAYKANAVVRFFY
ALGGALALQNSALHWSSDHRVHHKHVDNNDKDPYSANMGFWYSHIGWMLREYQAHRYHDYNNVRDLQNDTIVMWQHKHYL
LLTILMNVGLPALLGWFHGDVLSMLLLAGLARLVLVHHCTFFINSLAHIWGSQPYTDKNTARDNPLLAFLTYGEGYHNFH
HIFENDYRNGIHWWDYDPTKWLIKGLSWCGLAGDLRKVPQERIESAKLQMQLKRSQHRIAGHKDAEELLESLQLEYERLK
QQLLAYYEAKKELLEARRAELCVKELSPKVAELKNRLRLAQQNWASVTAACR

Sequences:

>Translated_372_residues
METIMNKPPIIWLNLSLFVLTLGGAITLVPWRAITHGFDAVEWVAFVVLVFYSGLSITAGYHRLWSHKAYKANAVVRFFY
ALGGALALQNSALHWSSDHRVHHKHVDNNDKDPYSANMGFWYSHIGWMLREYQAHRYHDYNNVRDLQNDTIVMWQHKHYL
LLTILMNVGLPALLGWFHGDVLSMLLLAGLARLVLVHHCTFFINSLAHIWGSQPYTDKNTARDNPLLAFLTYGEGYHNFH
HIFENDYRNGIHWWDYDPTKWLIKGLSWCGLAGDLRKVPQERIESAKLQMQLKRSQHRIAGHKDAEELLESLQLEYERLK
QQLLAYYEAKKELLEARRAELCVKELSPKVAELKNRLRLAQQNWASVTAACR
>Mature_372_residues
METIMNKPPIIWLNLSLFVLTLGGAITLVPWRAITHGFDAVEWVAFVVLVFYSGLSITAGYHRLWSHKAYKANAVVRFFY
ALGGALALQNSALHWSSDHRVHHKHVDNNDKDPYSANMGFWYSHIGWMLREYQAHRYHDYNNVRDLQNDTIVMWQHKHYL
LLTILMNVGLPALLGWFHGDVLSMLLLAGLARLVLVHHCTFFINSLAHIWGSQPYTDKNTARDNPLLAFLTYGEGYHNFH
HIFENDYRNGIHWWDYDPTKWLIKGLSWCGLAGDLRKVPQERIESAKLQMQLKRSQHRIAGHKDAEELLESLQLEYERLK
QQLLAYYEAKKELLEARRAELCVKELSPKVAELKNRLRLAQQNWASVTAACR

Specific function: Unknown

COG id: COG1398

COG function: function code I; Fatty-acid desaturase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI148596961, Length=290, Percent_Identity=35.8620689655172, Blast_Score=178, Evalue=9e-45,
Organism=Homo sapiens, GI53759151, Length=280, Percent_Identity=35.7142857142857, Blast_Score=162, Evalue=3e-40,
Organism=Homo sapiens, GI148596938, Length=204, Percent_Identity=34.8039215686275, Blast_Score=97, Evalue=4e-20,
Organism=Caenorhabditis elegans, GI17561776, Length=288, Percent_Identity=36.1111111111111, Blast_Score=167, Evalue=1e-41,
Organism=Caenorhabditis elegans, GI17540878, Length=245, Percent_Identity=36.734693877551, Blast_Score=156, Evalue=1e-38,
Organism=Caenorhabditis elegans, GI17561774, Length=283, Percent_Identity=33.9222614840989, Blast_Score=150, Evalue=1e-36,
Organism=Saccharomyces cerevisiae, GI6321383, Length=284, Percent_Identity=43.6619718309859, Blast_Score=236, Evalue=4e-63,
Organism=Drosophila melanogaster, GI24646500, Length=297, Percent_Identity=34.3434343434343, Blast_Score=163, Evalue=1e-40,
Organism=Drosophila melanogaster, GI21358573, Length=266, Percent_Identity=34.2105263157895, Blast_Score=152, Evalue=5e-37,
Organism=Drosophila melanogaster, GI24646303, Length=270, Percent_Identity=31.8518518518519, Blast_Score=147, Evalue=1e-35,
Organism=Drosophila melanogaster, GI24646299, Length=270, Percent_Identity=31.8518518518519, Blast_Score=147, Evalue=1e-35,
Organism=Drosophila melanogaster, GI24646305, Length=270, Percent_Identity=31.8518518518519, Blast_Score=147, Evalue=1e-35,
Organism=Drosophila melanogaster, GI24646301, Length=270, Percent_Identity=31.8518518518519, Blast_Score=147, Evalue=1e-35,
Organism=Drosophila melanogaster, GI24646297, Length=270, Percent_Identity=31.8518518518519, Blast_Score=147, Evalue=1e-35,
Organism=Drosophila melanogaster, GI24662393, Length=322, Percent_Identity=30.1242236024845, Blast_Score=147, Evalue=1e-35,
Organism=Drosophila melanogaster, GI24646295, Length=298, Percent_Identity=30.8724832214765, Blast_Score=143, Evalue=2e-34,
Organism=Drosophila melanogaster, GI21358571, Length=247, Percent_Identity=34.0080971659919, Blast_Score=142, Evalue=4e-34,
Organism=Drosophila melanogaster, GI161079187, Length=197, Percent_Identity=28.4263959390863, Blast_Score=75, Evalue=5e-14,
Organism=Drosophila melanogaster, GI24651333, Length=197, Percent_Identity=28.4263959390863, Blast_Score=75, Evalue=6e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43251; Mature: 43251

Theoretical pI: Translated: 8.95; Mature: 8.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METIMNKPPIIWLNLSLFVLTLGGAITLVPWRAITHGFDAVEWVAFVVLVFYSGLSITAG
CCCCCCCCCEEEEEHHHHHHHHCCHHEEECHHHHHCCCHHHHHHHHHHHHHHCCCCHHHH
YHRLWSHKAYKANAVVRFFYALGGALALQNSALHWSSDHRVHHKHVDNNDKDPYSANMGF
HHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCH
WYSHIGWMLREYQAHRYHDYNNVRDLQNDTIVMWQHKHYLLLTILMNVGLPALLGWFHGD
HHHHHHHHHHHHHHHHHCCCCHHHHCCCCEEEEEECCHHHHHHHHHHCCHHHHHHHHHHH
VLSMLLLAGLARLVLVHHCTFFINSLAHIWGSQPYTDKNTARDNPLLAFLTYGEGYHNFH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCHHHHH
HIFENDYRNGIHWWDYDPTKWLIKGLSWCGLAGDLRKVPQERIESAKLQMQLKRSQHRIA
HHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GHKDAEELLESLQLEYERLKQQLLAYYEAKKELLEARRAELCVKELSPKVAELKNRLRLA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
QQNWASVTAACR
HHHHHHHHHCCC
>Mature Secondary Structure
METIMNKPPIIWLNLSLFVLTLGGAITLVPWRAITHGFDAVEWVAFVVLVFYSGLSITAG
CCCCCCCCCEEEEEHHHHHHHHCCHHEEECHHHHHCCCHHHHHHHHHHHHHHCCCCHHHH
YHRLWSHKAYKANAVVRFFYALGGALALQNSALHWSSDHRVHHKHVDNNDKDPYSANMGF
HHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCH
WYSHIGWMLREYQAHRYHDYNNVRDLQNDTIVMWQHKHYLLLTILMNVGLPALLGWFHGD
HHHHHHHHHHHHHHHHHCCCCHHHHCCCCEEEEEECCHHHHHHHHHHCCHHHHHHHHHHH
VLSMLLLAGLARLVLVHHCTFFINSLAHIWGSQPYTDKNTARDNPLLAFLTYGEGYHNFH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCHHHHH
HIFENDYRNGIHWWDYDPTKWLIKGLSWCGLAGDLRKVPQERIESAKLQMQLKRSQHRIA
HHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GHKDAEELLESLQLEYERLKQQLLAYYEAKKELLEARRAELCVKELSPKVAELKNRLRLA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
QQNWASVTAACR
HHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA