Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119773303

Identifier: 119773303

GI number: 119773303

Start: 190244

End: 192076

Strand: Reverse

Name: 119773303

Synonym: Sama_0161

Alternate gene names: NA

Gene position: 192076-190244 (Counterclockwise)

Preceding gene: 119773304

Following gene: 119773299

Centisome position: 4.46

GC content: 56.36

Gene sequence:

>1833_bases
ATGCCATTCTTCCCCATAAAATCGTCCCTCACCTTACTTTCTTTTGCCTTGCTGAGCGCTGCGCCCGCTTGGTCTGCCCC
CGTTGTTGCCAATCAATTCGTTAACGATGCCGTGTTGCCCCCGATTGAAACCTGGCAAGGTGCCAGTGAAGCCCTGATGC
TGGCGCGCGACAGTAAATGGGCGACTCCTTTTGAGCAGAGTGGCGGCCTCAAGAGTCCCGACTACGAAGCCACCATGGCC
TGGCTCGACAAGTTGGTTAAACGCAGCAAATATCTGTCAAAGGTGAGTCTGGGCAAGAGCCCTCAGGGGCGTGACATCTG
GATGATTGTTGCCAGCAAAGAGGGGGCTGATACCCCGGGCAAGCTGGAAAAACAAGGCAAGCCCAGTGTGCTGGTGCAGG
CTGGCATCCATTCCGGTGAAATCGACGGTAAAGACGCGGGCATGATGCTGCTGCGGGATATCGAAATGGGGGGCAAGAGT
GCCCTGCTGGACAAGGTAAATCTGTTGTTTGTGCCCATCTTCAGTGTGGATGCCCACGAGCGCGCCAGCGAATATAACCG
GGTAAACCAGCGCGGCCCCGTCACCATGGGATGGCGCACCAATGCGCGCAACCTTAACCTCAACCGTGACTACGCCAAGG
CCGATACCAAAGAGATGCAGTTGATGCTGACCGCCATCAACGACTGGAACCCCAGCCTCTATATCGATGTGCACGTCACC
GATGGCATAGACTACCAGTACGATGTGACCTTCGGTTACAACCTGAGCCAGGGATTGAGTCCGGCCGCGTTTGCCTGGCT
CGACGGTGAATATCGCCCGGACATAGAATCGGCGTTGACCCGCGCAGGTCATATTCCCGGTCCTCTGGTGTTTGCCCTGG
ATAACAGCGATATGACCAGGGGCATGTCGCTGTGGAGTGCATCGCCCCGCTACTCCAATGGCTATGGTGATGCCCGCCAC
CTGCCGACCATATTGATAGAAAACCACAGCCTCAAGCCCTTCAAACAGAGGGTACTGGGCACGTACGTGATGCTGGAACA
AACCCTGAAGACGGTGGGCGAGCAGGCAACCGCGCTCAAGGCCGCCATCATGGCCGACAGCTTTGCCTTCCCTGAGCAAG
TCACCCTGACCTGGAAAGAAGCACTTCAGCCAAAGGGGTGGGACTTCAAAGGCATAGGTTATCGGGTGGAAAAAAGCCCC
ATTTCCGGTGCCGATGTGGTGCGCTGGACGGGCGAGCCCGTGCTGTACGAACAGCTGCCGGTTATCGGCAATACAGTGCC
CGATATCAGCGTCAGCCGCCCCGAGGCCTATTATGTGTTGCCCCAATGGCAGGAAGTCATAGCCAAGCTGGAAACCCACG
GTATCCGCTATGAGCGACTGCAGCAACCACAGCAACTGACACTGGGTCAGTACAGTTTCAGCAACCCCCAATTTGGCGCC
AAAGACTATGAAGGCCGCCAGCGGGTCAGTGCCGACGTCAGCCTGAACAAGGTTGAAACCACATTACCTGTTGGCACCAT
CAAAATCAGCACAGAGCAGGCACTGGGCGACCTTGCCATTTTGCTGCTGGAACCCCAGTCCCCGGACTCATTGCTGCAAT
GGGGCCTGTTCAATCCCATCTTCACCCGCACCGAATACATGGAGCAGTATGCGGTAGAACCCATGGCGGCGCGGATGTTG
GCCGAAGATCCTGAGCTGAAAAAGGCTTTTGACGATGCTCTCAAGGATCCGGACTTTGCCGCCGATCCAAACGCCCGCCT
GCGTTGGTTCTACGAAAAGAGCCATTATTACGACCAGGAATACCTCAAGTACCCTGTTTATCGCAGCTTCTGA

Upstream 100 bases:

>100_bases
CTGTTTATTCACGCAAAAACGGTTGTAATGCCTCTTGCTAAGACCAGCCAATTACGAAAAGATAGGCCTTTGATTTTTAC
TGCCATCATAGGCCTGGTCC

Downstream 100 bases:

>100_bases
CGTCAAAAAGCCGGGCTTGCCCGGCTTTTTAGTTTTCTGAATCATCACAGCTATCCCGGATGCCCCTGCCTGAGCTCGAT
TGGCGTTAGGATAAGGTCGT

Product: carboxypeptidase

Products: NA

Alternate protein names: Carboxypeptidase; M14 Family Peptidase; Zinc Carboxypeptidase Family Protein; Zinc-Carboxypeptidase; Peptidase Family M; Zinc Carboxypeptidase; Zinc Carboxypeptidase Family; Secreted Protein

Number of amino acids: Translated: 610; Mature: 609

Protein sequence:

>610_residues
MPFFPIKSSLTLLSFALLSAAPAWSAPVVANQFVNDAVLPPIETWQGASEALMLARDSKWATPFEQSGGLKSPDYEATMA
WLDKLVKRSKYLSKVSLGKSPQGRDIWMIVASKEGADTPGKLEKQGKPSVLVQAGIHSGEIDGKDAGMMLLRDIEMGGKS
ALLDKVNLLFVPIFSVDAHERASEYNRVNQRGPVTMGWRTNARNLNLNRDYAKADTKEMQLMLTAINDWNPSLYIDVHVT
DGIDYQYDVTFGYNLSQGLSPAAFAWLDGEYRPDIESALTRAGHIPGPLVFALDNSDMTRGMSLWSASPRYSNGYGDARH
LPTILIENHSLKPFKQRVLGTYVMLEQTLKTVGEQATALKAAIMADSFAFPEQVTLTWKEALQPKGWDFKGIGYRVEKSP
ISGADVVRWTGEPVLYEQLPVIGNTVPDISVSRPEAYYVLPQWQEVIAKLETHGIRYERLQQPQQLTLGQYSFSNPQFGA
KDYEGRQRVSADVSLNKVETTLPVGTIKISTEQALGDLAILLLEPQSPDSLLQWGLFNPIFTRTEYMEQYAVEPMAARML
AEDPELKKAFDDALKDPDFAADPNARLRWFYEKSHYYDQEYLKYPVYRSF

Sequences:

>Translated_610_residues
MPFFPIKSSLTLLSFALLSAAPAWSAPVVANQFVNDAVLPPIETWQGASEALMLARDSKWATPFEQSGGLKSPDYEATMA
WLDKLVKRSKYLSKVSLGKSPQGRDIWMIVASKEGADTPGKLEKQGKPSVLVQAGIHSGEIDGKDAGMMLLRDIEMGGKS
ALLDKVNLLFVPIFSVDAHERASEYNRVNQRGPVTMGWRTNARNLNLNRDYAKADTKEMQLMLTAINDWNPSLYIDVHVT
DGIDYQYDVTFGYNLSQGLSPAAFAWLDGEYRPDIESALTRAGHIPGPLVFALDNSDMTRGMSLWSASPRYSNGYGDARH
LPTILIENHSLKPFKQRVLGTYVMLEQTLKTVGEQATALKAAIMADSFAFPEQVTLTWKEALQPKGWDFKGIGYRVEKSP
ISGADVVRWTGEPVLYEQLPVIGNTVPDISVSRPEAYYVLPQWQEVIAKLETHGIRYERLQQPQQLTLGQYSFSNPQFGA
KDYEGRQRVSADVSLNKVETTLPVGTIKISTEQALGDLAILLLEPQSPDSLLQWGLFNPIFTRTEYMEQYAVEPMAARML
AEDPELKKAFDDALKDPDFAADPNARLRWFYEKSHYYDQEYLKYPVYRSF
>Mature_609_residues
PFFPIKSSLTLLSFALLSAAPAWSAPVVANQFVNDAVLPPIETWQGASEALMLARDSKWATPFEQSGGLKSPDYEATMAW
LDKLVKRSKYLSKVSLGKSPQGRDIWMIVASKEGADTPGKLEKQGKPSVLVQAGIHSGEIDGKDAGMMLLRDIEMGGKSA
LLDKVNLLFVPIFSVDAHERASEYNRVNQRGPVTMGWRTNARNLNLNRDYAKADTKEMQLMLTAINDWNPSLYIDVHVTD
GIDYQYDVTFGYNLSQGLSPAAFAWLDGEYRPDIESALTRAGHIPGPLVFALDNSDMTRGMSLWSASPRYSNGYGDARHL
PTILIENHSLKPFKQRVLGTYVMLEQTLKTVGEQATALKAAIMADSFAFPEQVTLTWKEALQPKGWDFKGIGYRVEKSPI
SGADVVRWTGEPVLYEQLPVIGNTVPDISVSRPEAYYVLPQWQEVIAKLETHGIRYERLQQPQQLTLGQYSFSNPQFGAK
DYEGRQRVSADVSLNKVETTLPVGTIKISTEQALGDLAILLLEPQSPDSLLQWGLFNPIFTRTEYMEQYAVEPMAARMLA
EDPELKKAFDDALKDPDFAADPNARLRWFYEKSHYYDQEYLKYPVYRSF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 68367; Mature: 68236

Theoretical pI: Translated: 5.21; Mature: 5.21

Prosite motif: PS00687 ALDEHYDE_DEHYDR_GLU

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPFFPIKSSLTLLSFALLSAAPAWSAPVVANQFVNDAVLPPIETWQGASEALMLARDSKW
CCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCHHHHCCCCCEEEEECCCCC
ATPFEQSGGLKSPDYEATMAWLDKLVKRSKYLSKVSLGKSPQGRDIWMIVASKEGADTPG
CCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCC
KLEKQGKPSVLVQAGIHSGEIDGKDAGMMLLRDIEMGGKSALLDKVNLLFVPIFSVDAHE
CCCCCCCCCEEEEECCCCCCCCCCCCCEEEEEECCCCCCHHHHHCCEEEEEEEEECCCHH
RASEYNRVNQRGPVTMGWRTNARNLNLNRDYAKADTKEMQLMLTAINDWNPSLYIDVHVT
HHHHHHHCCCCCCEEEEEECCCCCCCCCCCHHHCCHHHEEEEEEEECCCCCEEEEEEEEE
DGIDYQYDVTFGYNLSQGLSPAAFAWLDGEYRPDIESALTRAGHIPGPLVFALDNSDMTR
CCCCEEEEEEECCCCCCCCCCCEEEEECCCCCCCHHHHHHHCCCCCCCEEEEECCCCCHH
GMSLWSASPRYSNGYGDARHLPTILIENHSLKPFKQRVLGTYVMLEQTLKTVGEQATALK
CHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAIMADSFAFPEQVTLTWKEALQPKGWDFKGIGYRVEKSPISGADVVRWTGEPVLYEQLP
HHHHHHCCCCCCCEEEEHHHHCCCCCCCCCCCCEEEECCCCCCCCEEEECCCEEEHHCCC
VIGNTVPDISVSRPEAYYVLPQWQEVIAKLETHGIRYERLQQPQQLTLGQYSFSNPQFGA
CCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHCCCCHHHHCCCHHCCCCCEECCCCCCCC
KDYEGRQRVSADVSLNKVETTLPVGTIKISTEQALGDLAILLLEPQSPDSLLQWGLFNPI
CCCCCCHHEECCCEEEEEEEECCEEEEEEEHHHCCCCEEEEEECCCCCHHHHHHCCCCHH
FTRTEYMEQYAVEPMAARMLAEDPELKKAFDDALKDPDFAADPNARLRWFYEKSHYYDQE
HHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCHH
YLKYPVYRSF
HHCCCCCCCC
>Mature Secondary Structure 
PFFPIKSSLTLLSFALLSAAPAWSAPVVANQFVNDAVLPPIETWQGASEALMLARDSKW
CCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCHHHHCCCCCEEEEECCCCC
ATPFEQSGGLKSPDYEATMAWLDKLVKRSKYLSKVSLGKSPQGRDIWMIVASKEGADTPG
CCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCC
KLEKQGKPSVLVQAGIHSGEIDGKDAGMMLLRDIEMGGKSALLDKVNLLFVPIFSVDAHE
CCCCCCCCCEEEEECCCCCCCCCCCCCEEEEEECCCCCCHHHHHCCEEEEEEEEECCCHH
RASEYNRVNQRGPVTMGWRTNARNLNLNRDYAKADTKEMQLMLTAINDWNPSLYIDVHVT
HHHHHHHCCCCCCEEEEEECCCCCCCCCCCHHHCCHHHEEEEEEEECCCCCEEEEEEEEE
DGIDYQYDVTFGYNLSQGLSPAAFAWLDGEYRPDIESALTRAGHIPGPLVFALDNSDMTR
CCCCEEEEEEECCCCCCCCCCCEEEEECCCCCCCHHHHHHHCCCCCCCEEEEECCCCCHH
GMSLWSASPRYSNGYGDARHLPTILIENHSLKPFKQRVLGTYVMLEQTLKTVGEQATALK
CHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAIMADSFAFPEQVTLTWKEALQPKGWDFKGIGYRVEKSPISGADVVRWTGEPVLYEQLP
HHHHHHCCCCCCCEEEEHHHHCCCCCCCCCCCCEEEECCCCCCCCEEEECCCEEEHHCCC
VIGNTVPDISVSRPEAYYVLPQWQEVIAKLETHGIRYERLQQPQQLTLGQYSFSNPQFGA
CCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHCCCCHHHHCCCHHCCCCCEECCCCCCCC
KDYEGRQRVSADVSLNKVETTLPVGTIKISTEQALGDLAILLLEPQSPDSLLQWGLFNPI
CCCCCCHHEECCCEEEEEEEECCEEEEEEEHHHCCCCEEEEEECCCCCHHHHHHCCCCHH
FTRTEYMEQYAVEPMAARMLAEDPELKKAFDDALKDPDFAADPNARLRWFYEKSHYYDQE
HHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCHH
YLKYPVYRSF
HHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA