Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119773299

Identifier: 119773299

GI number: 119773299

Start: 185703

End: 186641

Strand: Reverse

Name: 119773299

Synonym: Sama_0157

Alternate gene names: NA

Gene position: 186641-185703 (Counterclockwise)

Preceding gene: 119773303

Following gene: 119773285

Centisome position: 4.33

GC content: 55.91

Gene sequence:

>939_bases
ATGAATACCCGATACCTAACTGCCGCAATACTGCTGGGACTGATGACAGCAAGCCCGCTGGTGACGGCCGGAATCGACGC
GCCGCAAACCAGTCATGCCAGTCAGGCTGCATTGCTGGGTAAGCCCGTGAGTCTGGCCCTGATGGAAGAGAGCCTCGCCA
AAACCGGTCCCCTGAACTTCAGCGCCCATGCCAGCGCCAATTGGCAGGTGCCTCTGAGGGGCTTGCTCAATCTTGAGGCT
CCGGCCGCCAGGGCGGCCGGAAAAAAAGATGCTGATGAGCCTATTCAGGTCTATCTGTATGAGTTTACGCACCCGCTGCA
TGGCCGCTTTTTTATCGATACCGGGGTGGCGCGGGGCTTACTTGAGTCGCCCGCAAAACATGGCGTACAAGCTGAACTCT
TCCAGACATTTGGCCTCGGGAAAATCCAACTGTTGCAAAGCAGCGGTGAAATTGCATCAAGCGGCAAGCCCCTGAGCGGT
ATCTTTCTGACCCACCTGCATCTGGATCATATCAGCGGCCTGCCCGATCTGGCCGCCGATATTCCCCTCTATGTTGGTCG
CAACGAACATGTGAGCCTGAACCCTCAGAATCACATGACCCAGGCAGCAACAGATGCCCTCTTGTCTGGCAGGCCGCCAT
TGAATGAATGGGGTTTCGATAAAGGCGAAGCGATAGATGTATTTGGTGACGCCAGCGTATTCGCATTGCCCACCCCGGGG
CATACCGAAGGCAGCACTGCCTATGTGCTCAATACCCTTAATGGGCCGGTGTTGATTGTTGGCGATACCTGCCATACGAC
CTGGGGATGGCAGCAGGGGGTTGAACCCGGTGATTTCACCCGGGATCAGCGACAAAACCGCACTAGTCTGTTGACGTTAA
AGGCCCTGAGTGACAGACACAGGCAGTTGAAGGTGTACTTGGGTCATCAACAGCTGTAA

Upstream 100 bases:

>100_bases
AACGAATACCTACATACGATATTCGCCAATTGAGACGACTGTCCATCCATGAAAACATGACCACAAGATAAAAGTAGCCA
AAACACCGCAAGGATGGAAT

Downstream 100 bases:

>100_bases
TTACGGTTGGCGATGCGCGCCAATGTTCACCGCAAAAAAGCAGACCCGGAAATCCCGGGTCTGCTTTATGTCACTGACAG
GGTTCAGCCCTTGGGCCAGC

Product: metallo-beta-lactamase family protein

Products: NA

Alternate protein names: Zn-Dependent Hydrolase Lipoprotein; Metallo-Hydrolase; Zn-Dependent Hydrolases Including Glyoxylases; Zn-Dependent Hydrolase; Beta-Lactamase Domain Protein; Beta-Lactamase Domain-Containing Protein

Number of amino acids: Translated: 312; Mature: 312

Protein sequence:

>312_residues
MNTRYLTAAILLGLMTASPLVTAGIDAPQTSHASQAALLGKPVSLALMEESLAKTGPLNFSAHASANWQVPLRGLLNLEA
PAARAAGKKDADEPIQVYLYEFTHPLHGRFFIDTGVARGLLESPAKHGVQAELFQTFGLGKIQLLQSSGEIASSGKPLSG
IFLTHLHLDHISGLPDLAADIPLYVGRNEHVSLNPQNHMTQAATDALLSGRPPLNEWGFDKGEAIDVFGDASVFALPTPG
HTEGSTAYVLNTLNGPVLIVGDTCHTTWGWQQGVEPGDFTRDQRQNRTSLLTLKALSDRHRQLKVYLGHQQL

Sequences:

>Translated_312_residues
MNTRYLTAAILLGLMTASPLVTAGIDAPQTSHASQAALLGKPVSLALMEESLAKTGPLNFSAHASANWQVPLRGLLNLEA
PAARAAGKKDADEPIQVYLYEFTHPLHGRFFIDTGVARGLLESPAKHGVQAELFQTFGLGKIQLLQSSGEIASSGKPLSG
IFLTHLHLDHISGLPDLAADIPLYVGRNEHVSLNPQNHMTQAATDALLSGRPPLNEWGFDKGEAIDVFGDASVFALPTPG
HTEGSTAYVLNTLNGPVLIVGDTCHTTWGWQQGVEPGDFTRDQRQNRTSLLTLKALSDRHRQLKVYLGHQQL
>Mature_312_residues
MNTRYLTAAILLGLMTASPLVTAGIDAPQTSHASQAALLGKPVSLALMEESLAKTGPLNFSAHASANWQVPLRGLLNLEA
PAARAAGKKDADEPIQVYLYEFTHPLHGRFFIDTGVARGLLESPAKHGVQAELFQTFGLGKIQLLQSSGEIASSGKPLSG
IFLTHLHLDHISGLPDLAADIPLYVGRNEHVSLNPQNHMTQAATDALLSGRPPLNEWGFDKGEAIDVFGDASVFALPTPG
HTEGSTAYVLNTLNGPVLIVGDTCHTTWGWQQGVEPGDFTRDQRQNRTSLLTLKALSDRHRQLKVYLGHQQL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33538; Mature: 33538

Theoretical pI: Translated: 6.63; Mature: 6.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTRYLTAAILLGLMTASPLVTAGIDAPQTSHASQAALLGKPVSLALMEESLAKTGPLNF
CCCHHHHHHHHHHHHHCCCCEEECCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHCCCCCE
SAHASANWQVPLRGLLNLEAPAARAAGKKDADEPIQVYLYEFTHPLHGRFFIDTGVARGL
EECCCCCCCCCHHHEECCCCCHHHHCCCCCCCCCEEEEEEEECCCCCCEEEEECHHHHHH
LESPAKHGVQAELFQTFGLGKIQLLQSSGEIASSGKPLSGIFLTHLHLDHISGLPDLAAD
HHHHHHCCCHHHHHHHCCCCEEEEEECCCCCCCCCCCCCEEEEEEEEHHHHCCCCCHHHC
IPLYVGRNEHVSLNPQNHMTQAATDALLSGRPPLNEWGFDKGEAIDVFGDASVFALPTPG
CCEEECCCCEEEECCHHHHHHHHHHHHHCCCCCCHHCCCCCCCEEEEECCCEEEEECCCC
HTEGSTAYVLNTLNGPVLIVGDTCHTTWGWQQGVEPGDFTRDQRQNRTSLLTLKALSDRH
CCCCCEEEEEEECCCCEEEECCCCCCCCCHHHCCCCCCCCHHHHCCCHHEEEEHHHHCCC
RQLKVYLGHQQL
EEEEEEECCCCC
>Mature Secondary Structure
MNTRYLTAAILLGLMTASPLVTAGIDAPQTSHASQAALLGKPVSLALMEESLAKTGPLNF
CCCHHHHHHHHHHHHHCCCCEEECCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHCCCCCE
SAHASANWQVPLRGLLNLEAPAARAAGKKDADEPIQVYLYEFTHPLHGRFFIDTGVARGL
EECCCCCCCCCHHHEECCCCCHHHHCCCCCCCCCEEEEEEEECCCCCCEEEEECHHHHHH
LESPAKHGVQAELFQTFGLGKIQLLQSSGEIASSGKPLSGIFLTHLHLDHISGLPDLAAD
HHHHHHCCCHHHHHHHCCCCEEEEEECCCCCCCCCCCCCEEEEEEEEHHHHCCCCCHHHC
IPLYVGRNEHVSLNPQNHMTQAATDALLSGRPPLNEWGFDKGEAIDVFGDASVFALPTPG
CCEEECCCCEEEECCHHHHHHHHHHHHHCCCCCCHHCCCCCCCEEEEECCCEEEEECCCC
HTEGSTAYVLNTLNGPVLIVGDTCHTTWGWQQGVEPGDFTRDQRQNRTSLLTLKALSDRH
CCCCCEEEEEEECCCCEEEECCCCCCCCCHHHCCCCCCCCHHHHCCCHHEEEEHHHHCCC
RQLKVYLGHQQL
EEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA