Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119773291

Identifier: 119773291

GI number: 119773291

Start: 171444

End: 172322

Strand: Direct

Name: 119773291

Synonym: Sama_0149

Alternate gene names: NA

Gene position: 171444-172322 (Clockwise)

Preceding gene: 119773290

Following gene: 119773292

Centisome position: 3.98

GC content: 52.9

Gene sequence:

>879_bases
ATGAAGCACTATTGGCTGCCCTTATTGTTTTGTTTGAGCATGACCCAAGCCTGGTCGGCACCTGAAACGACCAGCCAGAT
TGTATGGGTGGAGTCACAGCGTTCGGCACGCAATGCCAGCCATGAATTCTATGTGGATTTGCTGCAACTGGTGCTGGATA
ACAGTCGTGAGCAGTGGGGCGAGGCCAGGGTCGAAGAAGTGAATGGAGATTTTTCCCAATTCCGGGCCTTTGCTGCGCTA
AACAGCGGCATGTTACATGTCTTTTGGGCCGGCACCACTAAACAACGGCAAGAAAAATTCAAGGCCGTAGAGGTGCCCTT
GTTTGCAGGCTTGCTGGGGATCAGAGTGCCGGTGATCCGCCGCGACAGGTTAGAAGAGTTTCGAGGCTATAAAACCTTGG
CTGATTGGCGAAGACTAATGGCATGTCAGGGGGCTCAGTGGCCGGATTCGGACATATTGGAGGTGAATGGTTTCAGGGTC
GCCCGGATAGCCAAATTCGAACTTATGTACACTATGCTTAAGCAGGGACGCTGTGACTATTTTCCCCGCGGGCTTAATGA
GGTCGGTGCAGAATTGGCGGCCGACGGCCAGCAGGACCTGGTTGCCTATGAAGGTGTGCTGATTACCTATCCCTTTCCCA
TGTACTTTTTTGTGGGCAAGAATAACAACGCTTTGTACCAACGTCTGAGTACCACGCTGGAGGCCATGGCTGTGAGTGGT
GAGTTGCGTCAATTTCTGTTCAATCACCCCACCACTGCCGGGCTGTTCCCTTTGGAACGCTTTGACAACAGTCTCAGGTT
CAGATTAACCAATTCCCTGTTGCCGGCCTCGACGCCTTTGCAGCGTTCGGAACTCTGGCTGCCACTGACTCGCCCCTAA

Upstream 100 bases:

>100_bases
TTCTGTGAAGCGTTTTTATTGGCGCCCTTCATGGCCCATCACTATGCTCAGAGTGAACCCGGAAGCTTGCCGGAGAATGT
AGCGATTTCAGGACGATGGA

Downstream 100 bases:

>100_bases
GGTGCGCGCACGTTACTCCCGACGGTGATTTCCCCCCTTTATTTGATAGCGTGCTTGGACTCAAAATACACTCATTAACG
GGGGCCTTCCTGTTATAGGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 292; Mature: 292

Protein sequence:

>292_residues
MKHYWLPLLFCLSMTQAWSAPETTSQIVWVESQRSARNASHEFYVDLLQLVLDNSREQWGEARVEEVNGDFSQFRAFAAL
NSGMLHVFWAGTTKQRQEKFKAVEVPLFAGLLGIRVPVIRRDRLEEFRGYKTLADWRRLMACQGAQWPDSDILEVNGFRV
ARIAKFELMYTMLKQGRCDYFPRGLNEVGAELAADGQQDLVAYEGVLITYPFPMYFFVGKNNNALYQRLSTTLEAMAVSG
ELRQFLFNHPTTAGLFPLERFDNSLRFRLTNSLLPASTPLQRSELWLPLTRP

Sequences:

>Translated_292_residues
MKHYWLPLLFCLSMTQAWSAPETTSQIVWVESQRSARNASHEFYVDLLQLVLDNSREQWGEARVEEVNGDFSQFRAFAAL
NSGMLHVFWAGTTKQRQEKFKAVEVPLFAGLLGIRVPVIRRDRLEEFRGYKTLADWRRLMACQGAQWPDSDILEVNGFRV
ARIAKFELMYTMLKQGRCDYFPRGLNEVGAELAADGQQDLVAYEGVLITYPFPMYFFVGKNNNALYQRLSTTLEAMAVSG
ELRQFLFNHPTTAGLFPLERFDNSLRFRLTNSLLPASTPLQRSELWLPLTRP
>Mature_292_residues
MKHYWLPLLFCLSMTQAWSAPETTSQIVWVESQRSARNASHEFYVDLLQLVLDNSREQWGEARVEEVNGDFSQFRAFAAL
NSGMLHVFWAGTTKQRQEKFKAVEVPLFAGLLGIRVPVIRRDRLEEFRGYKTLADWRRLMACQGAQWPDSDILEVNGFRV
ARIAKFELMYTMLKQGRCDYFPRGLNEVGAELAADGQQDLVAYEGVLITYPFPMYFFVGKNNNALYQRLSTTLEAMAVSG
ELRQFLFNHPTTAGLFPLERFDNSLRFRLTNSLLPASTPLQRSELWLPLTRP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33649; Mature: 33649

Theoretical pI: Translated: 8.05; Mature: 8.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHYWLPLLFCLSMTQAWSAPETTSQIVWVESQRSARNASHEFYVDLLQLVLDNSREQWG
CCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCHHHCCCCHHHHHHHHHHHHHCCHHHHH
EARVEEVNGDFSQFRAFAALNSGMLHVFWAGTTKQRQEKFKAVEVPLFAGLLGIRVPVIR
HHHHHHCCCCHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCHHH
RDRLEEFRGYKTLADWRRLMACQGAQWPDSDILEVNGFRVARIAKFELMYTMLKQGRCDY
HHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCEEEECCEEEEHHHHHHHHHHHHHCCCCCC
FPRGLNEVGAELAADGQQDLVAYEGVLITYPFPMYFFVGKNNNALYQRLSTTLEAMAVSG
CCCCHHHHHHHHHCCCCHHHHHHCCEEEEECCCEEEEEECCCCHHHHHHHHHHHHHHHHH
ELRQFLFNHPTTAGLFPLERFDNSLRFRLTNSLLPASTPLQRSELWLPLTRP
HHHHHHHCCCCCCCCCCHHHCCCCEEEEEECCCCCCCCCCCCCCEEECCCCC
>Mature Secondary Structure
MKHYWLPLLFCLSMTQAWSAPETTSQIVWVESQRSARNASHEFYVDLLQLVLDNSREQWG
CCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCHHHCCCCHHHHHHHHHHHHHCCHHHHH
EARVEEVNGDFSQFRAFAALNSGMLHVFWAGTTKQRQEKFKAVEVPLFAGLLGIRVPVIR
HHHHHHCCCCHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCHHH
RDRLEEFRGYKTLADWRRLMACQGAQWPDSDILEVNGFRVARIAKFELMYTMLKQGRCDY
HHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCEEEECCEEEEHHHHHHHHHHHHHCCCCCC
FPRGLNEVGAELAADGQQDLVAYEGVLITYPFPMYFFVGKNNNALYQRLSTTLEAMAVSG
CCCCHHHHHHHHHCCCCHHHHHHCCEEEEECCCEEEEEECCCCHHHHHHHHHHHHHHHHH
ELRQFLFNHPTTAGLFPLERFDNSLRFRLTNSLLPASTPLQRSELWLPLTRP
HHHHHHHCCCCCCCCCCHHHCCCCEEEEEECCCCCCCCCCCCCCEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA