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The map label for this gene is trkA [H]

Identifier: 119773182

GI number: 119773182

Start: 43378

End: 44787

Strand: Reverse

Name: trkA [H]

Synonym: Sama_0040

Alternate gene names: 119773182

Gene position: 44787-43378 (Counterclockwise)

Preceding gene: 119773183

Following gene: 119773181

Centisome position: 1.04

GC content: 54.33

Gene sequence:

>1410_bases
ATGAAAATTATCATCTTGGGCGCAGGTCAAGTCGGGGGCACCCTCGCAGAAAACCTGGTGGGTGAAAACAACGACATCAC
CATAGTCGACAGCGATAAAAACAAACTGCGCAGCCTGCAGGACAAGTACGATCTGCGGGTAGTCGTCGGTCATGGTGCTC
ACCCGGACGTGCTGCGCGAAGCCGGCGCCGAAGATGCTGACATGCTGATTGCCGTGACCAACAGCGACGAGTGCAATATG
TCGGCCTGCCAGATTGCCTACACCCTGTTTGGTACCCCCACCAAGATTGCCCGTATCCGCTCTGAGCAGTATCTGCACAT
GCAGGAGCGGCTGTTTATCGACAGTGAAACCAAAAACTCCGATAACCGCACCCGCGGCGGCTTCGTCATTGACGAACTGA
TTGCCCCCGAGCAATTGGTGACGTCCTATATTCAGCGACTGGTGGAATATCCGGGAGCCCTGCAGGTGTTGGAGTTTGCC
GAAGGCAAGCTGAGTCTGGTGGCAGTAAGGGCTTACTACGGCGGGCCCTTGGTGGGTAATGCCCTGGCCGCATTGCGGGA
ACACATGCCCAATATTGATACCCGTGTTGCCGCTATTTTCCGCCAGGGACGACCCATCATGCCCCGGGGTACCACCATTA
TAGAGGCGGACGATGAAGTCTTCTTTGTGGCCGACAGTCGCCATATCCGCGCGGTAATGAGTGAAATGCAAAAGCTCGAT
AACAGCTATCGCAACATCATGATTGCCGGTGGTGGCAATATTGGTCTTGGGCTGGCGAAAAAGCTCGAGCGCAATCACTC
GGTAAAACTGATTGAGCACAAGGCAGAGCGTGCCGAGGCCCTGTCAGAGAAGCTACAAAATACCACTGTTTTTTGCGGTG
ATGCCTCGGATCAGGAGCTGTTGCTCGAAGAGCATATCGATCAGACCGACGTCTTCATTGCCGTCACCAACGACGATGAA
GCCAACATCATGTCGGCGCTACTGGCAAAACGCATGGGCGCTAAAAAAGTGATGGTGCTTATTCAGCGTGAAGCCTATGT
GGATATCGTTCAGGAAGCCAATATCGATATCGCGATTTCGCCGCAGCAAGCCACCATTTCTGCACTGCTGACCCATATCC
GTCAGGGCGATATCTGTAACGTATACTCCCTGCGCCGCGGCGCCGCCGAGGCTATCGAGGCAATCGCCCACGGAGATCCC
AGCACGTCTAAGGTAGTAGGCAAACAAATCGGGGAAATCCGCTTGCCGCCGGGCACCACCATTGGCGCCATTGTTCGCAA
TGATGAAGTGCTGATGGCCCACGATAAAACCGTGATCGAACAGGGCGACCATGTGATCCTCTTCCTGGTAAACAAGAAAT
TTATCGGCGAGGTCGAACGGTTGTTCCAACCCAGCGCTTTCTTCTTCTAA

Upstream 100 bases:

>100_bases
ACGATATTGGCTGGCAAATCCTGCCGGGACAGGACGACATGGACGGGTTTTATTACGCCCGCCTGAAAAAAGCGCTGGTT
TAGGGATTTAGGCAAACGCC

Downstream 100 bases:

>100_bases
CCATGCTGAACCTAAGACCGCTGCTCTTTATACTCGGCACTTTTTTGTCGATGTTGGCGGGCTTTATGCTTATCCCTCTG
CTGTTTGCCTTGTTGCATGG

Product: potassium transporter peripheral membrane component

Products: NA

Alternate protein names: K(+)-uptake protein trkA [H]

Number of amino acids: Translated: 469; Mature: 469

Protein sequence:

>469_residues
MKIIILGAGQVGGTLAENLVGENNDITIVDSDKNKLRSLQDKYDLRVVVGHGAHPDVLREAGAEDADMLIAVTNSDECNM
SACQIAYTLFGTPTKIARIRSEQYLHMQERLFIDSETKNSDNRTRGGFVIDELIAPEQLVTSYIQRLVEYPGALQVLEFA
EGKLSLVAVRAYYGGPLVGNALAALREHMPNIDTRVAAIFRQGRPIMPRGTTIIEADDEVFFVADSRHIRAVMSEMQKLD
NSYRNIMIAGGGNIGLGLAKKLERNHSVKLIEHKAERAEALSEKLQNTTVFCGDASDQELLLEEHIDQTDVFIAVTNDDE
ANIMSALLAKRMGAKKVMVLIQREAYVDIVQEANIDIAISPQQATISALLTHIRQGDICNVYSLRRGAAEAIEAIAHGDP
STSKVVGKQIGEIRLPPGTTIGAIVRNDEVLMAHDKTVIEQGDHVILFLVNKKFIGEVERLFQPSAFFF

Sequences:

>Translated_469_residues
MKIIILGAGQVGGTLAENLVGENNDITIVDSDKNKLRSLQDKYDLRVVVGHGAHPDVLREAGAEDADMLIAVTNSDECNM
SACQIAYTLFGTPTKIARIRSEQYLHMQERLFIDSETKNSDNRTRGGFVIDELIAPEQLVTSYIQRLVEYPGALQVLEFA
EGKLSLVAVRAYYGGPLVGNALAALREHMPNIDTRVAAIFRQGRPIMPRGTTIIEADDEVFFVADSRHIRAVMSEMQKLD
NSYRNIMIAGGGNIGLGLAKKLERNHSVKLIEHKAERAEALSEKLQNTTVFCGDASDQELLLEEHIDQTDVFIAVTNDDE
ANIMSALLAKRMGAKKVMVLIQREAYVDIVQEANIDIAISPQQATISALLTHIRQGDICNVYSLRRGAAEAIEAIAHGDP
STSKVVGKQIGEIRLPPGTTIGAIVRNDEVLMAHDKTVIEQGDHVILFLVNKKFIGEVERLFQPSAFFF
>Mature_469_residues
MKIIILGAGQVGGTLAENLVGENNDITIVDSDKNKLRSLQDKYDLRVVVGHGAHPDVLREAGAEDADMLIAVTNSDECNM
SACQIAYTLFGTPTKIARIRSEQYLHMQERLFIDSETKNSDNRTRGGFVIDELIAPEQLVTSYIQRLVEYPGALQVLEFA
EGKLSLVAVRAYYGGPLVGNALAALREHMPNIDTRVAAIFRQGRPIMPRGTTIIEADDEVFFVADSRHIRAVMSEMQKLD
NSYRNIMIAGGGNIGLGLAKKLERNHSVKLIEHKAERAEALSEKLQNTTVFCGDASDQELLLEEHIDQTDVFIAVTNDDE
ANIMSALLAKRMGAKKVMVLIQREAYVDIVQEANIDIAISPQQATISALLTHIRQGDICNVYSLRRGAAEAIEAIAHGDP
STSKVVGKQIGEIRLPPGTTIGAIVRNDEVLMAHDKTVIEQGDHVILFLVNKKFIGEVERLFQPSAFFF

Specific function: Part of a potassium transport system [H]

COG id: COG0569

COG function: function code P; K+ transport systems, NAD-binding component

Gene ontology:

Cell location: Peripherally Bound To The Inner Side Of The Inner Membrane Via The Trkg And Trkh Proteins [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 RCK N-terminal domains [H]

Homologues:

Organism=Escherichia coli, GI1789685, Length=469, Percent_Identity=70.7889125799574, Blast_Score=680, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006036
- InterPro:   IPR016040
- InterPro:   IPR006037
- InterPro:   IPR003148 [H]

Pfam domain/function: PF02080 TrkA_C; PF02254 TrkA_N [H]

EC number: NA

Molecular weight: Translated: 51616; Mature: 51616

Theoretical pI: Translated: 5.15; Mature: 5.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIIILGAGQVGGTLAENLVGENNDITIVDSDKNKLRSLQDKYDLRVVVGHGAHPDVLRE
CEEEEEECCCCCHHHHHHHCCCCCCEEEEECCHHHHHHHHHCCCEEEEEECCCCHHHHHH
AGAEDADMLIAVTNSDECNMSACQIAYTLFGTPTKIARIRSEQYLHMQERLFIDSETKNS
CCCCCCCEEEEEECCCCCCCHHHHEEEEECCCCHHHHHHHHHHHHHHHHHEEEECCCCCC
DNRTRGGFVIDELIAPEQLVTSYIQRLVEYPGALQVLEFAEGKLSLVAVRAYYGGPLVGN
CCCCCCCEEHHHHCCCHHHHHHHHHHHHHCCCCEEHHHHCCCCEEEEEEEECCCCCHHHH
ALAALREHMPNIDTRVAAIFRQGRPIMPRGTTIIEADDEVFFVADSRHIRAVMSEMQKLD
HHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCEEEECCCCEEEEECCHHHHHHHHHHHHHC
NSYRNIMIAGGGNIGLGLAKKLERNHSVKLIEHKAERAEALSEKLQNTTVFCGDASDQEL
CHHCEEEEECCCCCCHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHCCCEEEECCCCCHHH
LLEEHIDQTDVFIAVTNDDEANIMSALLAKRMGAKKVMVLIQREAYVDIVQEANIDIAIS
HHHHCCCCCEEEEEEECCCHHHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHHCCEEEEEC
PQQATISALLTHIRQGDICNVYSLRRGAAEAIEAIAHGDPSTSKVVGKQIGEIRLPPGTT
CCHHHHHHHHHHHCCCCCCCHHHHHCCHHHHHHHHHCCCCCHHHHHHHHCCCEECCCCCE
IGAIVRNDEVLMAHDKTVIEQGDHVILFLVNKKFIGEVERLFQPSAFFF
EEEEEECCCEEEEECCHHHHCCCEEEEEEECCHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MKIIILGAGQVGGTLAENLVGENNDITIVDSDKNKLRSLQDKYDLRVVVGHGAHPDVLRE
CEEEEEECCCCCHHHHHHHCCCCCCEEEEECCHHHHHHHHHCCCEEEEEECCCCHHHHHH
AGAEDADMLIAVTNSDECNMSACQIAYTLFGTPTKIARIRSEQYLHMQERLFIDSETKNS
CCCCCCCEEEEEECCCCCCCHHHHEEEEECCCCHHHHHHHHHHHHHHHHHEEEECCCCCC
DNRTRGGFVIDELIAPEQLVTSYIQRLVEYPGALQVLEFAEGKLSLVAVRAYYGGPLVGN
CCCCCCCEEHHHHCCCHHHHHHHHHHHHHCCCCEEHHHHCCCCEEEEEEEECCCCCHHHH
ALAALREHMPNIDTRVAAIFRQGRPIMPRGTTIIEADDEVFFVADSRHIRAVMSEMQKLD
HHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCEEEECCCCEEEEECCHHHHHHHHHHHHHC
NSYRNIMIAGGGNIGLGLAKKLERNHSVKLIEHKAERAEALSEKLQNTTVFCGDASDQEL
CHHCEEEEECCCCCCHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHCCCEEEECCCCCHHH
LLEEHIDQTDVFIAVTNDDEANIMSALLAKRMGAKKVMVLIQREAYVDIVQEANIDIAIS
HHHHCCCCCEEEEEEECCCHHHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHHCCEEEEEC
PQQATISALLTHIRQGDICNVYSLRRGAAEAIEAIAHGDPSTSKVVGKQIGEIRLPPGTT
CCHHHHHHHHHHHCCCCCCCHHHHHCCHHHHHHHHHCCCCCHHHHHHHHCCCEECCCCCE
IGAIVRNDEVLMAHDKTVIEQGDHVILFLVNKKFIGEVERLFQPSAFFF
EEEEEECCCEEEEECCHHHHCCCEEEEEEECCHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7948029; 9720051 [H]