| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119718846
Identifier: 119718846
GI number: 119718846
Start: 4908497
End: 4909264
Strand: Reverse
Name: 119718846
Synonym: Noca_4629
Alternate gene names: NA
Gene position: 4909264-4908497 (Counterclockwise)
Preceding gene: 119718847
Following gene: 119718842
Centisome position: 98.46
GC content: 74.09
Gene sequence:
>768_bases ATGAACGCCGGCTTCGACGCGCTCCTCGACGCGCTGGTGGCGACCGCGCAGGCGAGCGACGACGTGGTCGGTCTGGTGGC GTTCGGGTCGACGGCGGATCGCAGCAGGACCGACGCCGGATCCGACCACGACTTCGCCTGGATCACGGTTTCCGGCGCGG CGCCGAGGTGGCGCCGGGACCCCCGGTGGCTCCCCGACTCCGATCGGATCGTCCTCCACGTGATCGAGCACCACGGTGGC GTGAAGGTCATCTACGAGGACGGGCATCGGCTGGAGTTCGGTGTCGCGGAGCTGCACGACTTCGCCACCTGGGCCGGCGC TCCGGCCCGGGCCCTCGTCGGCGGCGACGCGGTCGAGGCTGCTGTGCGGCAGGTGGTCGCCCGCCGGCCGGAGGGCGCCC CGGACGCCGCGCGCTCCGCGCGGCTCTTCGTCACCCAGCTGCTGTCCGGGATGGAGCGCTACCACCGGGGCGAGCTGCTC AGCGCCTCCGGCCTGATCCGTGGCGAGGCGGTCGAGCACCTCCTCCGGACCGTCACGCTGCGCCTCCCCGGCGACCTCGA GTCGCTGGATCCGCTGGACCCGCGCCGTCGCTTCGAGCTCGTGCACCCGCGGCTCGCCGACCGGATCGAGCACATCTGTC GTCAGCCGCTGGACGTGGCCGGATCTCAACTCCTCGACCTCGCTGTCGAGGAGCTCTCGCCCGCGTGGGCCGAGTTCCCG CACGCGGCGGTGGCGGCCGCGCGCCGGCGGGTCGCCGCGCTCGGGTAG
Upstream 100 bases:
>100_bases CAGGTCGTCACCGCCGAGGAGCTGCCCCTCGACCGGGTCCCCGTCTACCTCGCCGCCGACGCCGCGCCCGGCCTCGCCGC GGTGTTCTCCGAATGACCTC
Downstream 100 bases:
>100_bases CGCGGTCGCGGCCGCCCCCCGTCACGAGTCGAAACCGAGCCCCAGCGCGTCGAGGGTCCGCAGGAACAGGTTGCGTCGGC CCTGGCGGTGGTCGGCGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 255; Mature: 255
Protein sequence:
>255_residues MNAGFDALLDALVATAQASDDVVGLVAFGSTADRSRTDAGSDHDFAWITVSGAAPRWRRDPRWLPDSDRIVLHVIEHHGG VKVIYEDGHRLEFGVAELHDFATWAGAPARALVGGDAVEAAVRQVVARRPEGAPDAARSARLFVTQLLSGMERYHRGELL SASGLIRGEAVEHLLRTVTLRLPGDLESLDPLDPRRRFELVHPRLADRIEHICRQPLDVAGSQLLDLAVEELSPAWAEFP HAAVAAARRRVAALG
Sequences:
>Translated_255_residues MNAGFDALLDALVATAQASDDVVGLVAFGSTADRSRTDAGSDHDFAWITVSGAAPRWRRDPRWLPDSDRIVLHVIEHHGG VKVIYEDGHRLEFGVAELHDFATWAGAPARALVGGDAVEAAVRQVVARRPEGAPDAARSARLFVTQLLSGMERYHRGELL SASGLIRGEAVEHLLRTVTLRLPGDLESLDPLDPRRRFELVHPRLADRIEHICRQPLDVAGSQLLDLAVEELSPAWAEFP HAAVAAARRRVAALG >Mature_255_residues MNAGFDALLDALVATAQASDDVVGLVAFGSTADRSRTDAGSDHDFAWITVSGAAPRWRRDPRWLPDSDRIVLHVIEHHGG VKVIYEDGHRLEFGVAELHDFATWAGAPARALVGGDAVEAAVRQVVARRPEGAPDAARSARLFVTQLLSGMERYHRGELL SASGLIRGEAVEHLLRTVTLRLPGDLESLDPLDPRRRFELVHPRLADRIEHICRQPLDVAGSQLLDLAVEELSPAWAEFP HAAVAAARRRVAALG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27721; Mature: 27721
Theoretical pI: Translated: 6.13; Mature: 6.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAGFDALLDALVATAQASDDVVGLVAFGSTADRSRTDAGSDHDFAWITVSGAAPRWRRD CCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCCCCC PRWLPDSDRIVLHVIEHHGGVKVIYEDGHRLEFGVAELHDFATWAGAPARALVGGDAVEA CCCCCCCCCEEEEEEECCCCEEEEEECCCEEEEHHHHHHHHHHHCCCCHHHHHCCHHHHH AVRQVVARRPEGAPDAARSARLFVTQLLSGMERYHRGELLSASGLIRGEAVEHLLRTVTL HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHHHH RLPGDLESLDPLDPRRRFELVHPRLADRIEHICRQPLDVAGSQLLDLAVEELSPAWAEFP CCCCCCCCCCCCCHHHHHHHHCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCHHHHHCC HAAVAAARRRVAALG HHHHHHHHHHHHHCC >Mature Secondary Structure MNAGFDALLDALVATAQASDDVVGLVAFGSTADRSRTDAGSDHDFAWITVSGAAPRWRRD CCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCCCCC PRWLPDSDRIVLHVIEHHGGVKVIYEDGHRLEFGVAELHDFATWAGAPARALVGGDAVEA CCCCCCCCCEEEEEEECCCCEEEEEECCCEEEEHHHHHHHHHHHCCCCHHHHHCCHHHHH AVRQVVARRPEGAPDAARSARLFVTQLLSGMERYHRGELLSASGLIRGEAVEHLLRTVTL HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHHHH RLPGDLESLDPLDPRRRFELVHPRLADRIEHICRQPLDVAGSQLLDLAVEELSPAWAEFP CCCCCCCCCCCCCHHHHHHHHCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCHHHHHCC HAAVAAARRRVAALG HHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA