Click here to switch to the map view.

The map label for this gene is 119718842

Identifier: 119718842

GI number: 119718842

Start: 4902619

End: 4904226

Strand: Reverse

Name: 119718842

Synonym: Noca_4625

Alternate gene names: NA

Gene position: 4904226-4902619 (Counterclockwise)

Preceding gene: 119718846

Following gene: 119718840

Centisome position: 98.36

GC content: 75.31

Gene sequence:

>1608_bases
GTGCCCCAACCGCCCGGCTGCGGCGAGGGACGATCCGTCGGGTATCGACGTCTGTATGCGACACTGTGTCGCATGCCGGT
CACCATCAGGGAAGCGCTGTCGCTGCCGGCTCTGGCCGACGGTGATCCGGTCGTGCTCAGCGGCGACGCGGTCCTGGACC
GGCCGCTGCGGTGGGTGCACATCTCCGAGGTGAGCGACATCGGCACGGTCCTGTCCGGCGCCGAGCTGGTGTTGTCGACC
GGTCTCGGGATGGCGGCGTCGGCCGCTGCCGCGGACGACTTCGTCCGACAGCTGGTCGAGGTGGGCGCCGCGGGGCTGGT
GATCGAGCTCAGCGCGGCGTACCCGTCGGTGCCCGAGCCGGCGCTGCGCCGAGCGCGCGCCGCCGGCTTCCCGGTCGTCG
CGCTGAACCGACCGGTGCGGTTCGTCGACGTCACCGAGGCGGTGCACCGCACGATCGTCGCGGAGCACTTCGACGAGGTG
GCCTTCGCCGGGCGGGTGCACGAGACGTTCACCGAGCTGGGCCTGGCCCGAGCGCCGATGTCCCGGCTGGTCGAGGCGGC
GGCCGATCTCGCGGACGGGTCGGTGGTGCTCGAGGACCTCGCGCGCCGGGTGCTCGTCGCGGCCGCCCGCGACGAGCCGG
TCGACCGGCTGCTGACCGACTGGGAACGCCGGTCACGGCTTACGCCGTTCCTTCGCGCGAGCGGCCGGGGTGGCCCGGAA
GGCTGGCTGACCACGCCGGTCGGCATCCAGGGCGGCGCATGGGGCCGGATCGTGGTGACCGCGCCGCGCGACGGCGACCG
GGCGCGGCTCGTGGCGGAGCGCACCGCACAGGCGCTCGAGCTCGGCCGGATGATCGAGCGGGACGAGACCTCCCTCCAGC
TCCGGGTCCACGGCGGCTTCCTCCTCGACCTGCTCGATGGCCGGCTCGGCGCCGAGCCGGTGGCGGCGGCGCGGCTGCGC
GCGCTCGGGGTGCCCGGGGCGGATGCGTACGTGGGTGCCGTCGCCCGGCTGCGGTCCGCTGCTCCGGTGGACCGCCTGGT
CGGCGTGCTCGGCGACGTCCCGGGGCTGGTCGGCGTGCTCGACGCGGTGCACGTCGGGCTGCTCGTCCCGGCCGACACGG
AGCTCGACCGGCTCGCCCGTGCCCTGGCCGACGCCGAGCCCGGCGCAGTGCTAGCGGTCGGTCACCCCGTCCCGAGCGTG
CTCCTCGTGGCCACGTCGATGCGGTCGGCGCGGGCGGTCTCGGACGTCGCGGTGACGATGCCCCCGCGGGCCGGCGGCTG
CTTCCGGCAGTCGGACATCCGGCTGCCCGGCCTGCTGATGTCGTTGCGCGGCGACGCCCGGCTGCAGGAGTTCACCGAGG
TGGAGCTCGGCACCCTGCTCGAGCACGAGGCCCGCCACGGCGGTGGCCTGGTCGAGCTGCTGCGCCAGTTCCTCGCCGTC
GGCGGCAACAAGACCGAGCTCGCCCGGGTCGCCCACCGCAACCGGACCTCGCTCTACCCCGCGCTCCGCCGGCTCGAGGA
CCTGGTCGGCCACCCGCTCGACGACCCCGCCTCCCGGCTCTCGCTCGGGGTCGCGCTGCTCGCCCACGACCAGCACCGCC
TCCTGTAG

Upstream 100 bases:

>100_bases
GTCCGGTGGCGGGGTTGGTGACGTCGCCGAGGCGGGTGGCCGCGCCCGGCTGCGGGAGGCCGTCGATCCAGTGCGGGATT
GTCGTCGTCATGCGCCGATC

Downstream 100 bases:

>100_bases
CGGCGGCTACTCGGTGGCGGCCAGGGTCGCGCCGAGGCCGATCATCATCACGCCGCCGGCGACACCGAGCTTGTCCAGCC
GCGTCGGGCGCCGCGCGAAC

Product: CdaR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator; Transcriptional Regulator PucR Family; Transcriptional Regulator CdaR; PucR Family Transcriptional Regulator; Purine Catabolism PurC Domain-Containing Protein; CdaR Family Transcriptional Regulator; PucR-Like Transcriptional Regulator; Purine Catabolism PurC-Like Protein; Transcription Regulator CcdaR; Transcriptional Activator; Regulator Of Polyketide Synthase Expression; PucR Family Protein Transcriptional Regulator; Fis Family Transcriptional Regulator

Number of amino acids: Translated: 535; Mature: 534

Protein sequence:

>535_residues
MPQPPGCGEGRSVGYRRLYATLCRMPVTIREALSLPALADGDPVVLSGDAVLDRPLRWVHISEVSDIGTVLSGAELVLST
GLGMAASAAAADDFVRQLVEVGAAGLVIELSAAYPSVPEPALRRARAAGFPVVALNRPVRFVDVTEAVHRTIVAEHFDEV
AFAGRVHETFTELGLARAPMSRLVEAAADLADGSVVLEDLARRVLVAAARDEPVDRLLTDWERRSRLTPFLRASGRGGPE
GWLTTPVGIQGGAWGRIVVTAPRDGDRARLVAERTAQALELGRMIERDETSLQLRVHGGFLLDLLDGRLGAEPVAAARLR
ALGVPGADAYVGAVARLRSAAPVDRLVGVLGDVPGLVGVLDAVHVGLLVPADTELDRLARALADAEPGAVLAVGHPVPSV
LLVATSMRSARAVSDVAVTMPPRAGGCFRQSDIRLPGLLMSLRGDARLQEFTEVELGTLLEHEARHGGGLVELLRQFLAV
GGNKTELARVAHRNRTSLYPALRRLEDLVGHPLDDPASRLSLGVALLAHDQHRLL

Sequences:

>Translated_535_residues
MPQPPGCGEGRSVGYRRLYATLCRMPVTIREALSLPALADGDPVVLSGDAVLDRPLRWVHISEVSDIGTVLSGAELVLST
GLGMAASAAAADDFVRQLVEVGAAGLVIELSAAYPSVPEPALRRARAAGFPVVALNRPVRFVDVTEAVHRTIVAEHFDEV
AFAGRVHETFTELGLARAPMSRLVEAAADLADGSVVLEDLARRVLVAAARDEPVDRLLTDWERRSRLTPFLRASGRGGPE
GWLTTPVGIQGGAWGRIVVTAPRDGDRARLVAERTAQALELGRMIERDETSLQLRVHGGFLLDLLDGRLGAEPVAAARLR
ALGVPGADAYVGAVARLRSAAPVDRLVGVLGDVPGLVGVLDAVHVGLLVPADTELDRLARALADAEPGAVLAVGHPVPSV
LLVATSMRSARAVSDVAVTMPPRAGGCFRQSDIRLPGLLMSLRGDARLQEFTEVELGTLLEHEARHGGGLVELLRQFLAV
GGNKTELARVAHRNRTSLYPALRRLEDLVGHPLDDPASRLSLGVALLAHDQHRLL
>Mature_534_residues
PQPPGCGEGRSVGYRRLYATLCRMPVTIREALSLPALADGDPVVLSGDAVLDRPLRWVHISEVSDIGTVLSGAELVLSTG
LGMAASAAAADDFVRQLVEVGAAGLVIELSAAYPSVPEPALRRARAAGFPVVALNRPVRFVDVTEAVHRTIVAEHFDEVA
FAGRVHETFTELGLARAPMSRLVEAAADLADGSVVLEDLARRVLVAAARDEPVDRLLTDWERRSRLTPFLRASGRGGPEG
WLTTPVGIQGGAWGRIVVTAPRDGDRARLVAERTAQALELGRMIERDETSLQLRVHGGFLLDLLDGRLGAEPVAAARLRA
LGVPGADAYVGAVARLRSAAPVDRLVGVLGDVPGLVGVLDAVHVGLLVPADTELDRLARALADAEPGAVLAVGHPVPSVL
LVATSMRSARAVSDVAVTMPPRAGGCFRQSDIRLPGLLMSLRGDARLQEFTEVELGTLLEHEARHGGGLVELLRQFLAVG
GNKTELARVAHRNRTSLYPALRRLEDLVGHPLDDPASRLSLGVALLAHDQHRLL

Specific function: Unknown

COG id: COG2508

COG function: function code TQ; Regulator of polyketide synthase expression

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 56766; Mature: 56635

Theoretical pI: Translated: 6.46; Mature: 6.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPQPPGCGEGRSVGYRRLYATLCRMPVTIREALSLPALADGDPVVLSGDAVLDRPLRWVH
CCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCEEEECCHHHHCCEEEEE
ISEVSDIGTVLSGAELVLSTGLGMAASAAAADDFVRQLVEVGAAGLVIELSAAYPSVPEP
HHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCH
ALRRARAAGFPVVALNRPVRFVDVTEAVHRTIVAEHFDEVAFAGRVHETFTELGLARAPM
HHHHHHHCCCCEEEECCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SRLVEAAADLADGSVVLEDLARRVLVAAARDEPVDRLLTDWERRSRLTPFLRASGRGGPE
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHCCCCCCCC
GWLTTPVGIQGGAWGRIVVTAPRDGDRARLVAERTAQALELGRMIERDETSLQLRVHGGF
CCEECCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCE
LLDLLDGRLGAEPVAAARLRALGVPGADAYVGAVARLRSAAPVDRLVGVLGDVPGLVGVL
EEHHHCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHH
DAVHVGLLVPADTELDRLARALADAEPGAVLAVGHPVPSVLLVATSMRSARAVSDVAVTM
HHHHHCEECCCCCHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHEEEEC
PPRAGGCFRQSDIRLPGLLMSLRGDARLQEFTEVELGTLLEHEARHGGGLVELLRQFLAV
CCCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHC
GGNKTELARVAHRNRTSLYPALRRLEDLVGHPLDDPASRLSLGVALLAHDQHRLL
CCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHEECCHHCCC
>Mature Secondary Structure 
PQPPGCGEGRSVGYRRLYATLCRMPVTIREALSLPALADGDPVVLSGDAVLDRPLRWVH
CCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCEEEECCHHHHCCEEEEE
ISEVSDIGTVLSGAELVLSTGLGMAASAAAADDFVRQLVEVGAAGLVIELSAAYPSVPEP
HHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCH
ALRRARAAGFPVVALNRPVRFVDVTEAVHRTIVAEHFDEVAFAGRVHETFTELGLARAPM
HHHHHHHCCCCEEEECCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SRLVEAAADLADGSVVLEDLARRVLVAAARDEPVDRLLTDWERRSRLTPFLRASGRGGPE
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHCCCCCCCC
GWLTTPVGIQGGAWGRIVVTAPRDGDRARLVAERTAQALELGRMIERDETSLQLRVHGGF
CCEECCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCE
LLDLLDGRLGAEPVAAARLRALGVPGADAYVGAVARLRSAAPVDRLVGVLGDVPGLVGVL
EEHHHCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHH
DAVHVGLLVPADTELDRLARALADAEPGAVLAVGHPVPSVLLVATSMRSARAVSDVAVTM
HHHHHCEECCCCCHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHEEEEC
PPRAGGCFRQSDIRLPGLLMSLRGDARLQEFTEVELGTLLEHEARHGGGLVELLRQFLAV
CCCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHC
GGNKTELARVAHRNRTSLYPALRRLEDLVGHPLDDPASRLSLGVALLAHDQHRLL
CCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHEECCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA