Definition Nocardioides sp. JS614 chromosome, complete genome.
Accession NC_008699
Length 4,985,871

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The map label for this gene is 119718813

Identifier: 119718813

GI number: 119718813

Start: 4866788

End: 4867612

Strand: Reverse

Name: 119718813

Synonym: Noca_4596

Alternate gene names: NA

Gene position: 4867612-4866788 (Counterclockwise)

Preceding gene: 119718815

Following gene: 119718807

Centisome position: 97.63

GC content: 77.09

Gene sequence:

>825_bases
GTGCTCGCCGCGGCGCGCTGGCACGGGGTGCCGGCGCCCGGCCCGTACGCCGCGCTGCGCGAGGCCCTGCTTCGCGACGA
CGGCACCATCCGGCGCACCATCCTCGACCGGGCGACCCAGACCAACGAGGCGGGCCGGCTGGCCACTCTGGTGCCCGCCT
TCGCGCTCGCCGCCGGCGCCGGCCCCGTGGCGCTGGTCGAGGTCGGCGCCAGTGCCGGGCTCTGCCTCTTCCCGGACCGC
TACCGCTATGCGTGGCGCACCGCCTCCGGTGTACACCGGGTCGGCGACCCCGCCGCCCCGGAGCTCGCCTGCGCGGTGCT
GGGCGACGGACCGCTTCCCGACGGCCCGCCCGAGGTGGTCTGGCGAGCGGGCATCGACCTGGCGCCGGTCGACGTCACCG
ACGACGACCAGGTGCGCTGGCTGGCCGCGCTGGTCTGGCCCGAGCACGACGACCGCCGGGCCCGGCTCGAGCGTGCCGTC
GAGGTCGCTCGGGCCGATCCGCCGTACCTGGTCCGCGGTGACCTGCTCGAAGAGCTCCCCGCGCTGGTCGACCGGGCGCG
CGAGCACGCCCCGGTGCTGGTGTTCCACAGCGCGGTGGTCGCCTACCTGCCCGAGGAGCGCCGGACCGCGTTCCACGACC
TGATGACCGGGCTGGTCGCGGCCGGTCGGTGCCACTGGGTGAGCAACGAGGGGCCGCGGGTGCTCCCCGCCGTCACCGCG
ACCGGTCCGGCCGTGCCGGAGGACGAGCACGGCTTCGTGTTCGGCGTCGACGGGCGCGCGGTCGCCCGCACCCACGGCCA
CGGCCGCAGCCTCCGCTGGTTCTAG

Upstream 100 bases:

>100_bases
CCGCCCCGACGTCGCCCTGCTTCGCGGACTGGTCGCGGCCGACGAGGAGCTGCTGGCCTGGCTGGCGACCCTGCCGCTGA
CCAAGCGCCAGCCCAACCTG

Downstream 100 bases:

>100_bases
CCCGCGCCATCACGGTCCCGACCTCTCGGCCAATACTGGAACTTCTCGACCGAAGTTTCGGCCCAACAGTTCCGGTTTCC
CCGGTTCACCGGGGAAACCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 274; Mature: 274

Protein sequence:

>274_residues
MLAAARWHGVPAPGPYAALREALLRDDGTIRRTILDRATQTNEAGRLATLVPAFALAAGAGPVALVEVGASAGLCLFPDR
YRYAWRTASGVHRVGDPAAPELACAVLGDGPLPDGPPEVVWRAGIDLAPVDVTDDDQVRWLAALVWPEHDDRRARLERAV
EVARADPPYLVRGDLLEELPALVDRAREHAPVLVFHSAVVAYLPEERRTAFHDLMTGLVAAGRCHWVSNEGPRVLPAVTA
TGPAVPEDEHGFVFGVDGRAVARTHGHGRSLRWF

Sequences:

>Translated_274_residues
MLAAARWHGVPAPGPYAALREALLRDDGTIRRTILDRATQTNEAGRLATLVPAFALAAGAGPVALVEVGASAGLCLFPDR
YRYAWRTASGVHRVGDPAAPELACAVLGDGPLPDGPPEVVWRAGIDLAPVDVTDDDQVRWLAALVWPEHDDRRARLERAV
EVARADPPYLVRGDLLEELPALVDRAREHAPVLVFHSAVVAYLPEERRTAFHDLMTGLVAAGRCHWVSNEGPRVLPAVTA
TGPAVPEDEHGFVFGVDGRAVARTHGHGRSLRWF
>Mature_274_residues
MLAAARWHGVPAPGPYAALREALLRDDGTIRRTILDRATQTNEAGRLATLVPAFALAAGAGPVALVEVGASAGLCLFPDR
YRYAWRTASGVHRVGDPAAPELACAVLGDGPLPDGPPEVVWRAGIDLAPVDVTDDDQVRWLAALVWPEHDDRRARLERAV
EVARADPPYLVRGDLLEELPALVDRAREHAPVLVFHSAVVAYLPEERRTAFHDLMTGLVAAGRCHWVSNEGPRVLPAVTA
TGPAVPEDEHGFVFGVDGRAVARTHGHGRSLRWF

Specific function: Unknown

COG id: COG4427

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29538; Mature: 29538

Theoretical pI: Translated: 6.18; Mature: 6.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAAARWHGVPAPGPYAALREALLRDDGTIRRTILDRATQTNEAGRLATLVPAFALAAGA
CCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCC
GPVALVEVGASAGLCLFPDRYRYAWRTASGVHRVGDPAAPELACAVLGDGPLPDGPPEVV
CCEEEEEECCCCCEEECCCCHHHEECCCCCCHHCCCCCCCCEEEEEECCCCCCCCCHHHH
WRAGIDLAPVDVTDDDQVRWLAALVWPEHDDRRARLERAVEVARADPPYLVRGDLLEELP
EECCCCEEECCCCCCCHHEEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEHHHHHHHHH
ALVDRAREHAPVLVFHSAVVAYLPEERRTAFHDLMTGLVAAGRCHWVSNEGPRVLPAVTA
HHHHHHHHCCCEEEEHHHHHHHCCHHHHHHHHHHHHHHHHCCEEEEECCCCCEEEEEEEC
TGPAVPEDEHGFVFGVDGRAVARTHGHGRSLRWF
CCCCCCCCCCCEEEECCCCEEEEECCCCCCCCCC
>Mature Secondary Structure
MLAAARWHGVPAPGPYAALREALLRDDGTIRRTILDRATQTNEAGRLATLVPAFALAAGA
CCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCC
GPVALVEVGASAGLCLFPDRYRYAWRTASGVHRVGDPAAPELACAVLGDGPLPDGPPEVV
CCEEEEEECCCCCEEECCCCHHHEECCCCCCHHCCCCCCCCEEEEEECCCCCCCCCHHHH
WRAGIDLAPVDVTDDDQVRWLAALVWPEHDDRRARLERAVEVARADPPYLVRGDLLEELP
EECCCCEEECCCCCCCHHEEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEHHHHHHHHH
ALVDRAREHAPVLVFHSAVVAYLPEERRTAFHDLMTGLVAAGRCHWVSNEGPRVLPAVTA
HHHHHHHHCCCEEEEHHHHHHHCCHHHHHHHHHHHHHHHHCCEEEEECCCCCEEEEEEEC
TGPAVPEDEHGFVFGVDGRAVARTHGHGRSLRWF
CCCCCCCCCCCEEEECCCCEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA