| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is adhE [H]
Identifier: 119718250
GI number: 119718250
Start: 4254499
End: 4256034
Strand: Reverse
Name: adhE [H]
Synonym: Noca_4031
Alternate gene names: 119718250
Gene position: 4256034-4254499 (Counterclockwise)
Preceding gene: 119718251
Following gene: 119718249
Centisome position: 85.36
GC content: 72.4
Gene sequence:
>1536_bases ATGACGCACGACGAGCTCGACAGCGACCTGCGCTCGATCCAGGAGGCCCGCCGCCTCGCCACGGCGGCCCGGGCGGCTCA GCGGGAGTTCGCCCACGCCTCGCAGGCCGAGGTGGACCGGATCTGCGCGGCGATGGCCGACGCGGTCTACCGTGAGGCCG CCCGCCTCGGGCAGCTGGCGACCGACGAGACCGGGTACGGCGTACCCGCCCACAAGCGGCTCAAGGTCGAGTTCGCCTCG CGCACGGTGTGGGAGTCGATCCGCGACGTGCCGACCGTGGGCGTGCTGCGCCGAGACGAGGCGAAGGGGATCGTCGAGAT CGGCTGGCCGGTCGGCGTGATCGTCGGCCTGTGCCCCTCCACCAACCCCAACTCGACGGCGATCTACAAGGTGCTGATCT CGGTCAAGGCGCGCAACGCCTGCATCATCGCCCCGCACCCCTCGGCCAAGGCCGCCACCTACGAGGCGGTGCGGATCATG ATCGAGGCGGGGGAGCGGGCCGGCATGCCCAAGGGCCTGGTCGGCTGCATGCAGGAGGTCAGCCTCCCCGGCTCCCAGGA GCTGATGCGGCACTACGCGACGTCGATGATCCTGGCCACCGGCGGCACGCCGATGGTGCGCGCGGCCCACAGCATGGGCA AGCCCGCGCTCGGCGTCGGGCCCGGCAACGTCCCGGCGTACGTCGACCGCAGTGCGGACGTGCTGGCGGCCGCCACCGCG ATCGTCAACAGCAAGTCCTTCGACTGCTCCACGATCTGTGCGACCGAGCAGGCGGTCGTAGCGGACGCGCCGATCGCCGG CGCGCTGCGCGCCGAGATGGAGCGCCTCGGCGCCTACTTCGTCTCTGCGGAGGAGAAGGCGGCGCTCGAGCGCACCGTGT TCAACCCGGGCGGCGCGATGAACCCCAAGGCGGTCGGGAAGTCGCCGCAGGCCCTGGCGGCGCTGGCGGGCATCCAGGTC CCCGAGCATGCCCGGATCCTCGTTGCCGAGCTGGGCAGCGTCGGTCCGCAGGAGCCGCTCAGCGCCGAGAAGCTCACCAC CGTGCTCGGCTGGTACGTCGAGGACGGCTGGCGGGCCGGCTGCGAGCGGTCGATCGAGCTGCTGAAGTTCGGCGGCGACG GGCACTCGCTGGTGATCCACGCGACCGACGAGGAGGTGATCATGGCGTTCGGGCTAGAGAAGCCCGCCTTCCGGATCCTC GTCAACACCTGGGGCACCCTCGGCGCGATCGGTGCGACGACCGGCGTGATGCCGGCGCTGACGCTCGCCCCGGGCGGGAT CGGCGGTGCCGTGGTCAGCGACAACATCACCGTTACGCACCTGCTCAACGTCAAGCGTCTGGCCTTCAAGCTGCACGAGC CGCCCGCCGCGGCGTACGAGCACGCACCCGACGTGCGGGGCGCCCCCCGCCACGACGGCCCCCGCTCGGCCGAGGCGACC CCGGCGGCGCGCGTCGCCGAACCCGCTGCGGTGAGCGGGGACCAGGTGGAACGCATCGTCCGCCGGGTGCTCAGCGAGCT CGGAGCCGGCCGATGA
Upstream 100 bases:
>100_bases CCGGAGGGTTCCTGGTCGGTTCCCAAAGCGCCGTGGTGGCCGCGTGCAACGCGTTCCGCGACGGTGTTCTCGAGATTGCG GCACAGCCGCGGGAGGTCTG
Downstream 100 bases:
>100_bases CCGGCGCGCACGGCATCCGAGGGCCGGCCCCGCCGGCTCGAGCCCAACCGCCACCGATGGCGGGACCGCAGCTTCAGCAC CTCGACTTCGTAGCACCCCG
Product: acetaldehyde dehydrogenase
Products: NA
Alternate protein names: Alcohol dehydrogenase; ADH; Acetaldehyde dehydrogenase [acetylating]; ACDH [H]
Number of amino acids: Translated: 511; Mature: 510
Protein sequence:
>511_residues MTHDELDSDLRSIQEARRLATAARAAQREFAHASQAEVDRICAAMADAVYREAARLGQLATDETGYGVPAHKRLKVEFAS RTVWESIRDVPTVGVLRRDEAKGIVEIGWPVGVIVGLCPSTNPNSTAIYKVLISVKARNACIIAPHPSAKAATYEAVRIM IEAGERAGMPKGLVGCMQEVSLPGSQELMRHYATSMILATGGTPMVRAAHSMGKPALGVGPGNVPAYVDRSADVLAAATA IVNSKSFDCSTICATEQAVVADAPIAGALRAEMERLGAYFVSAEEKAALERTVFNPGGAMNPKAVGKSPQALAALAGIQV PEHARILVAELGSVGPQEPLSAEKLTTVLGWYVEDGWRAGCERSIELLKFGGDGHSLVIHATDEEVIMAFGLEKPAFRIL VNTWGTLGAIGATTGVMPALTLAPGGIGGAVVSDNITVTHLLNVKRLAFKLHEPPAAAYEHAPDVRGAPRHDGPRSAEAT PAARVAEPAAVSGDQVERIVRRVLSELGAGR
Sequences:
>Translated_511_residues MTHDELDSDLRSIQEARRLATAARAAQREFAHASQAEVDRICAAMADAVYREAARLGQLATDETGYGVPAHKRLKVEFAS RTVWESIRDVPTVGVLRRDEAKGIVEIGWPVGVIVGLCPSTNPNSTAIYKVLISVKARNACIIAPHPSAKAATYEAVRIM IEAGERAGMPKGLVGCMQEVSLPGSQELMRHYATSMILATGGTPMVRAAHSMGKPALGVGPGNVPAYVDRSADVLAAATA IVNSKSFDCSTICATEQAVVADAPIAGALRAEMERLGAYFVSAEEKAALERTVFNPGGAMNPKAVGKSPQALAALAGIQV PEHARILVAELGSVGPQEPLSAEKLTTVLGWYVEDGWRAGCERSIELLKFGGDGHSLVIHATDEEVIMAFGLEKPAFRIL VNTWGTLGAIGATTGVMPALTLAPGGIGGAVVSDNITVTHLLNVKRLAFKLHEPPAAAYEHAPDVRGAPRHDGPRSAEAT PAARVAEPAAVSGDQVERIVRRVLSELGAGR >Mature_510_residues THDELDSDLRSIQEARRLATAARAAQREFAHASQAEVDRICAAMADAVYREAARLGQLATDETGYGVPAHKRLKVEFASR TVWESIRDVPTVGVLRRDEAKGIVEIGWPVGVIVGLCPSTNPNSTAIYKVLISVKARNACIIAPHPSAKAATYEAVRIMI EAGERAGMPKGLVGCMQEVSLPGSQELMRHYATSMILATGGTPMVRAAHSMGKPALGVGPGNVPAYVDRSADVLAAATAI VNSKSFDCSTICATEQAVVADAPIAGALRAEMERLGAYFVSAEEKAALERTVFNPGGAMNPKAVGKSPQALAALAGIQVP EHARILVAELGSVGPQEPLSAEKLTTVLGWYVEDGWRAGCERSIELLKFGGDGHSLVIHATDEEVIMAFGLEKPAFRILV NTWGTLGAIGATTGVMPALTLAPGGIGGAVVSDNITVTHLLNVKRLAFKLHEPPAAAYEHAPDVRGAPRHDGPRSAEATP AARVAEPAAVSGDQVERIVRRVLSELGAGR
Specific function: This enzyme has probably two activities:ADH, and ACDH [H]
COG id: COG1012
COG function: function code C; NAD-dependent aldehyde dehydrogenases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the iron- containing alcohol dehydrogenase family [H]
Homologues:
Organism=Escherichia coli, GI1787493, Length=459, Percent_Identity=37.9084967320261, Blast_Score=292, Evalue=3e-80, Organism=Escherichia coli, GI1788797, Length=299, Percent_Identity=31.1036789297659, Blast_Score=119, Evalue=3e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001670 - InterPro: IPR018211 - InterPro: IPR016161 - InterPro: IPR016163 - InterPro: IPR016162 - InterPro: IPR015590 - InterPro: IPR012079 [H]
Pfam domain/function: PF00171 Aldedh; PF00465 Fe-ADH [H]
EC number: =1.1.1.1; =1.2.1.10 [H]
Molecular weight: Translated: 53703; Mature: 53572
Theoretical pI: Translated: 6.84; Mature: 6.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTHDELDSDLRSIQEARRLATAARAAQREFAHASQAEVDRICAAMADAVYREAARLGQLA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC TDETGYGVPAHKRLKVEFASRTVWESIRDVPTVGVLRRDEAKGIVEIGWPVGVIVGLCPS CCCCCCCCCCCCEEEEEHHHHHHHHHHHCCCCCCCEECCCCCCEEEECCHHHHHEECCCC TNPNSTAIYKVLISVKARNACIIAPHPSAKAATYEAVRIMIEAGERAGMPKGLVGCMQEV CCCCCHHEEHEEEEEECCCEEEECCCCCCCHHHHHHHHHHEECCCCCCCCHHHHHHHHHH SLPGSQELMRHYATSMILATGGTPMVRAAHSMGKPALGVGPGNVPAYVDRSADVLAAATA CCCCHHHHHHHHHHHEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCEECCCCHHHHHHHH IVNSKSFDCSTICATEQAVVADAPIAGALRAEMERLGAYFVSAEEKAALERTVFNPGGAM HHCCCCCCCHHHHCCCCHHEECCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHEECCCCCC NPKAVGKSPQALAALAGIQVPEHARILVAELGSVGPQEPLSAEKLTTVLGWYVEDGWRAG CCHHCCCCHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHH CERSIELLKFGGDGHSLVIHATDEEVIMAFGLEKPAFRILVNTWGTLGAIGATTGVMPAL HHHCEEEEEECCCCCEEEEEECCCCEEEEECCCCCHHEEEECCCCHHHHHHHHHCCCHHH TLAPGGIGGAVVSDNITVTHLLNVKRLAFKLHEPPAAAYEHAPDVRGAPRHDGPRSAEAT HCCCCCCCCCEEECCEEEEHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCCCCCCCC PAARVAEPAAVSGDQVERIVRRVLSELGAGR CHHHHCCCCCCCHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure THDELDSDLRSIQEARRLATAARAAQREFAHASQAEVDRICAAMADAVYREAARLGQLA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC TDETGYGVPAHKRLKVEFASRTVWESIRDVPTVGVLRRDEAKGIVEIGWPVGVIVGLCPS CCCCCCCCCCCCEEEEEHHHHHHHHHHHCCCCCCCEECCCCCCEEEECCHHHHHEECCCC TNPNSTAIYKVLISVKARNACIIAPHPSAKAATYEAVRIMIEAGERAGMPKGLVGCMQEV CCCCCHHEEHEEEEEECCCEEEECCCCCCCHHHHHHHHHHEECCCCCCCCHHHHHHHHHH SLPGSQELMRHYATSMILATGGTPMVRAAHSMGKPALGVGPGNVPAYVDRSADVLAAATA CCCCHHHHHHHHHHHEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCEECCCCHHHHHHHH IVNSKSFDCSTICATEQAVVADAPIAGALRAEMERLGAYFVSAEEKAALERTVFNPGGAM HHCCCCCCCHHHHCCCCHHEECCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHEECCCCCC NPKAVGKSPQALAALAGIQVPEHARILVAELGSVGPQEPLSAEKLTTVLGWYVEDGWRAG CCHHCCCCHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHH CERSIELLKFGGDGHSLVIHATDEEVIMAFGLEKPAFRILVNTWGTLGAIGATTGVMPAL HHHCEEEEEECCCCCEEEEEECCCCEEEEECCCCCHHEEEECCCCHHHHHHHHHCCCHHH TLAPGGIGGAVVSDNITVTHLLNVKRLAFKLHEPPAAAYEHAPDVRGAPRHDGPRSAEAT HCCCCCCCCCEEECCEEEEHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCCCCCCCC PAARVAEPAAVSGDQVERIVRRVLSELGAGR CHHHHCCCCCCCHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8226639; 8300540; 11466286 [H]