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The map label for this gene is csoS1B [H]

Identifier: 119718249

GI number: 119718249

Start: 4254057

End: 4254371

Strand: Reverse

Name: csoS1B [H]

Synonym: Noca_4030

Alternate gene names: 119718249

Gene position: 4254371-4254057 (Counterclockwise)

Preceding gene: 119718250

Following gene: 119718248

Centisome position: 85.33

GC content: 70.16

Gene sequence:

>315_bases
GTGGCAAATCCCCAGATGATCGCACTTGGCATGATCGAGACCCGCGGTCTCGTGGGCTCGATCGAGGCCGCCGACGCCAT
GGTGAAGGCGGCGAACGTCACCCTGATCGGCAAGGAGCACATCGGTGGCGGCTACGTCACCGTGATGGTCCGCGGTGACG
TCGGCGCGGTCAAGGCCGCCACGGACGCCGGCGCCGCGGCCGCGCAGCGCGTCGGTGACCTGGTCAGCGTCCACGTCATC
CCCCGCCCGCACGGCGACGTCGAGTTCATCCTGCCCTCGCAGAACGCCGGGACCGCGCCGACCCCCACCAAGTGA

Upstream 100 bases:

>100_bases
CCCCGCCGGCTCGAGCCCAACCGCCACCGATGGCGGGACCGCAGCTTCAGCACCTCGACTTCGTAGCACCCCGGCAGCAC
CACAGTGAGAGGAAATTCCA

Downstream 100 bases:

>100_bases
GCCACCGGATCGCGCGAGCAACTAAGGCGCTCCGGTGAGCCGCCGGGTCCACACCGCCGACGACGTGCTCGGTCTCGCCC
GTGCGGGCAGGACCGAGCTC

Product: microcompartments protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 104; Mature: 103

Protein sequence:

>104_residues
MANPQMIALGMIETRGLVGSIEAADAMVKAANVTLIGKEHIGGGYVTVMVRGDVGAVKAATDAGAAAAQRVGDLVSVHVI
PRPHGDVEFILPSQNAGTAPTPTK

Sequences:

>Translated_104_residues
MANPQMIALGMIETRGLVGSIEAADAMVKAANVTLIGKEHIGGGYVTVMVRGDVGAVKAATDAGAAAAQRVGDLVSVHVI
PRPHGDVEFILPSQNAGTAPTPTK
>Mature_103_residues
ANPQMIALGMIETRGLVGSIEAADAMVKAANVTLIGKEHIGGGYVTVMVRGDVGAVKAATDAGAAAAQRVGDLVSVHVIP
RPHGDVEFILPSQNAGTAPTPTK

Specific function: Involved in the formation of the carboxysome, a polyhedral inclusion where RuBisCO is sequestered [H]

COG id: COG4577

COG function: function code QC; Carbon dioxide concentrating mechanism/carboxysome shell protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial microcompartments protein family [H]

Homologues:

Organism=Escherichia coli, GI87082108, Length=87, Percent_Identity=75.8620689655172, Blast_Score=112, Evalue=7e-27,
Organism=Escherichia coli, GI87082105, Length=88, Percent_Identity=46.5909090909091, Blast_Score=65, Evalue=8e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020808
- InterPro:   IPR000249 [H]

Pfam domain/function: PF00936 BMC [H]

EC number: NA

Molecular weight: Translated: 10500; Mature: 10369

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: PS01139 BACT_MICROCOMP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANPQMIALGMIETRGLVGSIEAADAMVKAANVTLIGKEHIGGGYVTVMVRGDVGAVKAA
CCCCCEEEEEEEECCCCEECCCHHHHEEEECCEEEEECCCCCCEEEEEEEECCCCEEEEC
TDAGAAAAQRVGDLVSVHVIPRPHGDVEFILPSQNAGTAPTPTK
CCCCHHHHHHCCCEEEEEEEECCCCCEEEEEECCCCCCCCCCCC
>Mature Secondary Structure 
ANPQMIALGMIETRGLVGSIEAADAMVKAANVTLIGKEHIGGGYVTVMVRGDVGAVKAA
CCCCEEEEEEEECCCCEECCCHHHHEEEECCEEEEECCCCCCEEEEEEEECCCCEEEEC
TDAGAAAAQRVGDLVSVHVIPRPHGDVEFILPSQNAGTAPTPTK
CCCCHHHHHHCCCEEEEEEEECCCCCEEEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7934888; 9696760 [H]