Definition Nocardioides sp. JS614 chromosome, complete genome.
Accession NC_008699
Length 4,985,871

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The map label for this gene is 119718183

Identifier: 119718183

GI number: 119718183

Start: 4178023

End: 4178991

Strand: Reverse

Name: 119718183

Synonym: Noca_3964

Alternate gene names: NA

Gene position: 4178991-4178023 (Counterclockwise)

Preceding gene: 119718184

Following gene: 119718180

Centisome position: 83.82

GC content: 72.76

Gene sequence:

>969_bases
ATGCAGATCCCCCAGCCTCGCGGTCCGCTCACCGAGGAGCTCTTCGGCGCCCTCCGGGCCGGCTCGGACGACTTCTACCC
GGTCCTCGCGGTCGGCGCCTCGGAGGGCGAGGACGCCGCCCTGGCGCTCTGGGCGCTCCACGAGCTGCACTACCGCGGGT
TCGACGAGGTCCGTGACGACCTGGAGTGGGACCCGCAGCTGGTGCGGCTGCGTGGGCTGCTGGAGCGCGACCTCGAGCAG
CGGCTGTGGGAGCGCTTCACGCCGCCCGTGGGTCTCTCCTTCGTCGAGGACTTCTTCGGGTGGGTCGCCGAGCAGGACGG
CGCCTCGGTCGCCACGCACGTGCAGCGCGACGCCGACCGCGAGCAGGTCCTCGAGCTCCTCCGGGTGCGCTCGATCTACC
ACCTCAAGGAGTCCGACCCCGCCGCGTGGGTCGTGCCCCGCCTCGGCGTGCGGGCCAAGGCCGCGCTGATGGAGCTCCAG
TACGACGAGTACGGCGGCGGCGACCCCAACCGGCTGCACCACCACCTGTTCGCGCAGGGCATGGAGGCCAGCGGGCTGGC
GGCGTCGTACGGCGCCCACGTCGACGAGGTGCCCCTGGAGGTGCTCGAGCAGAACAACGCGATGTCGCTCTTCGGCCTGC
ACCGGCGCCTGCGTGGCGCGGCCCTGGGCCATCTGGCGGCGTTCGAGGCGACCAGCTCGCTGCCGTCGCGGCGGATGGTG
CAGGGCCTGGAGCGGCTCGGCTTCCCCGAGGAGGTGGTGGCCTACTACGCCGAGCACGTGGAGGCGGACGCGGTCCACGA
GCAGCTGGCGGTGCGCACCATCTGCGGCGGCCTGCTGGCCGAGGAGCCGGGTCTCGAGGAGGACGTGTGGTTCGGGGCGT
TCACCTGCCTGGACCTCGAGGACCGGTTCGCCGGCACGATGCTCGAGCGCTGGGGAGTCGGCGAGGAGCGGAAGGAGGAG
GTCGCGTGA

Upstream 100 bases:

>100_bases
GCGGTCTCGATACGCGCTGGCGCCCGCTGCTCGACCAGCGACCTTCGGGATCAGCGCGCCGGTAGGCATGGCTGCAAATC
CGGGCGGGTACTCACCGCGC

Downstream 100 bases:

>100_bases
GTGGGTGCTACGACCATCCGGATGTGGTGCTCTGCCCCGGCGGACCGATGCTGCTGCGCGGCCAGCACACCATCGAGGAT
CCCGCCGGGGTCGCCCACGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 322; Mature: 322

Protein sequence:

>322_residues
MQIPQPRGPLTEELFGALRAGSDDFYPVLAVGASEGEDAALALWALHELHYRGFDEVRDDLEWDPQLVRLRGLLERDLEQ
RLWERFTPPVGLSFVEDFFGWVAEQDGASVATHVQRDADREQVLELLRVRSIYHLKESDPAAWVVPRLGVRAKAALMELQ
YDEYGGGDPNRLHHHLFAQGMEASGLAASYGAHVDEVPLEVLEQNNAMSLFGLHRRLRGAALGHLAAFEATSSLPSRRMV
QGLERLGFPEEVVAYYAEHVEADAVHEQLAVRTICGGLLAEEPGLEEDVWFGAFTCLDLEDRFAGTMLERWGVGEERKEE
VA

Sequences:

>Translated_322_residues
MQIPQPRGPLTEELFGALRAGSDDFYPVLAVGASEGEDAALALWALHELHYRGFDEVRDDLEWDPQLVRLRGLLERDLEQ
RLWERFTPPVGLSFVEDFFGWVAEQDGASVATHVQRDADREQVLELLRVRSIYHLKESDPAAWVVPRLGVRAKAALMELQ
YDEYGGGDPNRLHHHLFAQGMEASGLAASYGAHVDEVPLEVLEQNNAMSLFGLHRRLRGAALGHLAAFEATSSLPSRRMV
QGLERLGFPEEVVAYYAEHVEADAVHEQLAVRTICGGLLAEEPGLEEDVWFGAFTCLDLEDRFAGTMLERWGVGEERKEE
VA
>Mature_322_residues
MQIPQPRGPLTEELFGALRAGSDDFYPVLAVGASEGEDAALALWALHELHYRGFDEVRDDLEWDPQLVRLRGLLERDLEQ
RLWERFTPPVGLSFVEDFFGWVAEQDGASVATHVQRDADREQVLELLRVRSIYHLKESDPAAWVVPRLGVRAKAALMELQ
YDEYGGGDPNRLHHHLFAQGMEASGLAASYGAHVDEVPLEVLEQNNAMSLFGLHRRLRGAALGHLAAFEATSSLPSRRMV
QGLERLGFPEEVVAYYAEHVEADAVHEQLAVRTICGGLLAEEPGLEEDVWFGAFTCLDLEDRFAGTMLERWGVGEERKEE
VA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36040; Mature: 36040

Theoretical pI: Translated: 4.42; Mature: 4.42

Prosite motif: PS00687 ALDEHYDE_DEHYDR_GLU

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQIPQPRGPLTEELFGALRAGSDDFYPVLAVGASEGEDAALALWALHELHYRGFDEVRDD
CCCCCCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCHHHHHHC
LEWDPQLVRLRGLLERDLEQRLWERFTPPVGLSFVEDFFGWVAEQDGASVATHVQRDADR
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCH
EQVLELLRVRSIYHLKESDPAAWVVPRLGVRAKAALMELQYDEYGGGDPNRLHHHLFAQG
HHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCC
MEASGLAASYGAHVDEVPLEVLEQNNAMSLFGLHRRLRGAALGHLAAFEATSSLPSRRMV
CCCCCCHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
QGLERLGFPEEVVAYYAEHVEADAVHEQLAVRTICGGLLAEEPGLEEDVWFGAFTCLDLE
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHEEEECCH
DRFAGTMLERWGVGEERKEEVA
HHHHHHHHHHHCCCHHHHHCCC
>Mature Secondary Structure
MQIPQPRGPLTEELFGALRAGSDDFYPVLAVGASEGEDAALALWALHELHYRGFDEVRDD
CCCCCCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCHHHHHHC
LEWDPQLVRLRGLLERDLEQRLWERFTPPVGLSFVEDFFGWVAEQDGASVATHVQRDADR
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCH
EQVLELLRVRSIYHLKESDPAAWVVPRLGVRAKAALMELQYDEYGGGDPNRLHHHLFAQG
HHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCC
MEASGLAASYGAHVDEVPLEVLEQNNAMSLFGLHRRLRGAALGHLAAFEATSSLPSRRMV
CCCCCCHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
QGLERLGFPEEVVAYYAEHVEADAVHEQLAVRTICGGLLAEEPGLEEDVWFGAFTCLDLE
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHEEEECCH
DRFAGTMLERWGVGEERKEEVA
HHHHHHHHHHHCCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA