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The map label for this gene is lemA [H]

Identifier: 119718184

GI number: 119718184

Start: 4179205

End: 4179768

Strand: Reverse

Name: lemA [H]

Synonym: Noca_3965

Alternate gene names: 119718184

Gene position: 4179768-4179205 (Counterclockwise)

Preceding gene: 119718186

Following gene: 119718183

Centisome position: 83.83

GC content: 68.97

Gene sequence:

>564_bases
ATGCTCATCGCCATCATCGTCATCGTCGTGGTGCTCGTCGCCCTGGTCGCCTTCGGCGTCGTCGGCTTCAACAAGCTGCG
CACCACCGACATCGGGGCCCAGGAGGCGCTCGGCGGCATCGACGTCCAGCTCACCCGGCGCGCCGACCTGATCCCCAACC
TGGTCGAGACCGTCAAGGGGTACGCCGCGCACGAGAAGGGCGTGTTCGAGGAGGTGACCGCGGCGCGGACCGGCGTGCAG
GCCGCGGCCAAGGGCGACGACGTCGCCGCCAAGGCCGCCGCGGACGCCCGGCTCCAGGGCGCGCTGGTCAACCTGAACGC
CGTCGCCGAGGCCTACCCGGACCTCAAGGCGAACCAGAACTTCCTCGACCTCCAGCAGCAGCTGGCCGAGACCGAGAACC
AGATCTCCTTCGCCCGGCAGTACTACAACGACGCCGTGGCGACCCTGAACAAGCTGACCCAGACCATCCCGTGGATGTTC
TTCACCGGCGTGGCCGGCGTGCACAAGCGCGACTTCTACGACGCCCCGGACGGCCACGAGCAGGCGCCCCAGGTCAGCTT
CTGA

Upstream 100 bases:

>100_bases
TCTCGGGTGGCGGCGGAGGCGGCGGCGGGGGCGGCGGCTCCTGGTGACCGACCGACCATCCCACGTCCACCTGTACCCAC
CCGTGTTCTGAGGAGTTCAC

Downstream 100 bases:

>100_bases
GCTGCCCACGCCACCCGAGCTTGCTCGGGAGGCGTGGAAGCTGCAGCCAGGTCGAGTAGCCCCGCGACCGACGAAGGAGG
TCGCGACGGGCGTATCGAGA

Product: LemA family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 187; Mature: 187

Protein sequence:

>187_residues
MLIAIIVIVVVLVALVAFGVVGFNKLRTTDIGAQEALGGIDVQLTRRADLIPNLVETVKGYAAHEKGVFEEVTAARTGVQ
AAAKGDDVAAKAAADARLQGALVNLNAVAEAYPDLKANQNFLDLQQQLAETENQISFARQYYNDAVATLNKLTQTIPWMF
FTGVAGVHKRDFYDAPDGHEQAPQVSF

Sequences:

>Translated_187_residues
MLIAIIVIVVVLVALVAFGVVGFNKLRTTDIGAQEALGGIDVQLTRRADLIPNLVETVKGYAAHEKGVFEEVTAARTGVQ
AAAKGDDVAAKAAADARLQGALVNLNAVAEAYPDLKANQNFLDLQQQLAETENQISFARQYYNDAVATLNKLTQTIPWMF
FTGVAGVHKRDFYDAPDGHEQAPQVSF
>Mature_187_residues
MLIAIIVIVVVLVALVAFGVVGFNKLRTTDIGAQEALGGIDVQLTRRADLIPNLVETVKGYAAHEKGVFEEVTAARTGVQ
AAAKGDDVAAKAAADARLQGALVNLNAVAEAYPDLKANQNFLDLQQQLAETENQISFARQYYNDAVATLNKLTQTIPWMF
FTGVAGVHKRDFYDAPDGHEQAPQVSF

Specific function: Unknown

COG id: COG1704

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LemA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007156 [H]

Pfam domain/function: PF04011 LemA [H]

EC number: NA

Molecular weight: Translated: 20114; Mature: 20114

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLIAIIVIVVVLVALVAFGVVGFNKLRTTDIGAQEALGGIDVQLTRRADLIPNLVETVKG
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCEEEHHHHHHHHHHHHHHHH
YAAHEKGVFEEVTAARTGVQAAAKGDDVAAKAAADARLQGALVNLNAVAEAYPDLKANQN
HHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
FLDLQQQLAETENQISFARQYYNDAVATLNKLTQTIPWMFFTGVAGVHKRDFYDAPDGHE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCC
QAPQVSF
CCCCCCC
>Mature Secondary Structure
MLIAIIVIVVVLVALVAFGVVGFNKLRTTDIGAQEALGGIDVQLTRRADLIPNLVETVKG
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCEEEHHHHHHHHHHHHHHHH
YAAHEKGVFEEVTAARTGVQAAAKGDDVAAKAAADARLQGALVNLNAVAEAYPDLKANQN
HHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
FLDLQQQLAETENQISFARQYYNDAVATLNKLTQTIPWMFFTGVAGVHKRDFYDAPDGHE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCC
QAPQVSF
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11860552 [H]