| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is cheB
Identifier: 119717821
GI number: 119717821
Start: 3816380
End: 3817480
Strand: Reverse
Name: cheB
Synonym: Noca_3599
Alternate gene names: 119717821
Gene position: 3817480-3816380 (Counterclockwise)
Preceding gene: 119717822
Following gene: 119717820
Centisome position: 76.57
GC content: 73.57
Gene sequence:
>1101_bases ATGCCCGGTATCAGGGTGCTCGTGGTCGACGACTCCGTGGTGATCCGCAAGCTGGTGTCCGACCTGCTCTCCGCCGACCC GGACATCGAGGTCGTCGGCACGGCCGTGAACGGCCGGGCCGCGCTGCAGAAGGTCGCGCAGCTCAGGCCGGACCTGGTGA CCATGGATATCGAGATGCCGGAGATGGACGGCATCGAGTCGGTCCGCGCCATCCGCGCGACCGGCAACAAGGTACCGATC ATCATGTTCAGCACGCTCACCGAGCGGGGCGCGGTCGCGACCCTGGACGCCCTCGGCGCGGGCGCCTCCGACTACGTGCC CAAGCCGGCGAACGTCGGCAGCGTGGGCCGCTCGATGGAGCAGGTCCGCGAGGCGCTGATCCCGCGGATCAAGTCGCTGG TGCCCCGACGCGGCATCACCCCGCACCCCGCTGGTGTCACGGTCGCCCCGACCGCCACCGTGCAGCTGCACGCCCCGGCG ACGCCTCCGCTCGGAGGCCACCGCCTGCTGGTCATCGGCAGCTCGACCGGCGGCCCCGAGGCCCTCAGCGCGCTGCTGCA CACGCTGCCGCCGCTCTCGGTCCCGGTGGCGGTCGTGCAGCACATGCCGCCCCTGTTCACCCGCCAGTTCGCCGCCCGCC TGGACCGGCAGCTGCCGTACGACGTCGTCGAGGCGGAGCACAACCAGCCGCTGCGGCCGGGCACCGTGGCGATCGCGCCC GGCGACTACCACCTCGAGGTGACCACCGACGCCGCCGGCCTCCGCACCCGGCTCACCCAGGCGCCGCCCGAGAACTACTG CCGGCCGGCCGTCGACGTGCTGTTCCGCAGCGCCGTGGCCGCCGTCGGCCCGGCGGTGCTGGCCGCTGTGCTGACCGGCA TGGGGTCCGACGGCTGCAAGGGCGCGAGGCTGATCGTCGAGCGCGGCGGCAGCGTCCTGGCCCAGGACCAGGCCACCTCC GTGGTCTGGGGGATGCCGGGCGCCGTCGCCACCGCGGGGCTGGCCGAACGGGTGCTGCCCCTTCTCGAGCTCGGACCGGA GATCCTGCGCCGGCTCGCTCGCCAACGTCCGTCCCTCGTCCCGGCAGGAGCGCTGTCATGA
Upstream 100 bases:
>100_bases CTGACATCCGGACCTGGGTGCGTCGCACTCCTTAGGTATCCGCCCGCGCCGCCGATGGTCACTACGTCCGCAGCCTGGCG GACAGGACGAGAGGACGCCC
Downstream 100 bases:
>100_bases GCATCGGGCACGACGCCTTCACGTTCGTCCGCGAGCTGGTGCGAGCGGAGAGCGCGATCGTCCTCGAGCCGGGCAAGGAG TACCTCGTCGAGTCCCGCCT
Product: response regulator receiver modulated CheB methylesterase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 366; Mature: 365
Protein sequence:
>366_residues MPGIRVLVVDDSVVIRKLVSDLLSADPDIEVVGTAVNGRAALQKVAQLRPDLVTMDIEMPEMDGIESVRAIRATGNKVPI IMFSTLTERGAVATLDALGAGASDYVPKPANVGSVGRSMEQVREALIPRIKSLVPRRGITPHPAGVTVAPTATVQLHAPA TPPLGGHRLLVIGSSTGGPEALSALLHTLPPLSVPVAVVQHMPPLFTRQFAARLDRQLPYDVVEAEHNQPLRPGTVAIAP GDYHLEVTTDAAGLRTRLTQAPPENYCRPAVDVLFRSAVAAVGPAVLAAVLTGMGSDGCKGARLIVERGGSVLAQDQATS VVWGMPGAVATAGLAERVLPLLELGPEILRRLARQRPSLVPAGALS
Sequences:
>Translated_366_residues MPGIRVLVVDDSVVIRKLVSDLLSADPDIEVVGTAVNGRAALQKVAQLRPDLVTMDIEMPEMDGIESVRAIRATGNKVPI IMFSTLTERGAVATLDALGAGASDYVPKPANVGSVGRSMEQVREALIPRIKSLVPRRGITPHPAGVTVAPTATVQLHAPA TPPLGGHRLLVIGSSTGGPEALSALLHTLPPLSVPVAVVQHMPPLFTRQFAARLDRQLPYDVVEAEHNQPLRPGTVAIAP GDYHLEVTTDAAGLRTRLTQAPPENYCRPAVDVLFRSAVAAVGPAVLAAVLTGMGSDGCKGARLIVERGGSVLAQDQATS VVWGMPGAVATAGLAERVLPLLELGPEILRRLARQRPSLVPAGALS >Mature_365_residues PGIRVLVVDDSVVIRKLVSDLLSADPDIEVVGTAVNGRAALQKVAQLRPDLVTMDIEMPEMDGIESVRAIRATGNKVPII MFSTLTERGAVATLDALGAGASDYVPKPANVGSVGRSMEQVREALIPRIKSLVPRRGITPHPAGVTVAPTATVQLHAPAT PPLGGHRLLVIGSSTGGPEALSALLHTLPPLSVPVAVVQHMPPLFTRQFAARLDRQLPYDVVEAEHNQPLRPGTVAIAPG DYHLEVTTDAAGLRTRLTQAPPENYCRPAVDVLFRSAVAAVGPAVLAAVLTGMGSDGCKGARLIVERGGSVLAQDQATSV VWGMPGAVATAGLAERVLPLLELGPEILRRLARQRPSLVPAGALS
Specific function: Involved in the modulation of the chemotaxis system; catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR
COG id: COG2201
COG function: function code NT; Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain
Homologues:
Organism=Escherichia coli, GI1788192, Length=361, Percent_Identity=34.6260387811634, Blast_Score=208, Evalue=5e-55, Organism=Escherichia coli, GI1788550, Length=112, Percent_Identity=37.5, Blast_Score=76, Evalue=4e-15, Organism=Escherichia coli, GI87082052, Length=132, Percent_Identity=31.0606060606061, Blast_Score=65, Evalue=6e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): CHEB_NOCSJ (A1SMR4)
Other databases:
- EMBL: CP000509 - RefSeq: YP_924786.1 - ProteinModelPortal: A1SMR4 - SMR: A1SMR4 - STRING: A1SMR4 - GeneID: 4599402 - GenomeReviews: CP000509_GR - KEGG: nca:Noca_3599 - eggNOG: COG2201 - HOGENOM: HBG705324 - OMA: YLFESIS - PhylomeDB: A1SMR4 - BioCyc: NSP35761:NOCA_3599-MONOMER - GO: GO:0005737 - GO: GO:0006935 - HAMAP: MF_00099 - InterPro: IPR011006 - InterPro: IPR008248 - InterPro: IPR000673 - InterPro: IPR001789 - Gene3D: G3DSA:3.40.50.180 - PIRSF: PIRSF000876 - SMART: SM00448
Pfam domain/function: PF01339 CheB_methylest; PF00072 Response_reg; SSF52738 Chemotax_RR_pGlu_Me-esterase; SSF52172 CheY_like
EC number: =3.1.1.61
Molecular weight: Translated: 38225; Mature: 38094
Theoretical pI: Translated: 8.26; Mature: 8.26
Prosite motif: PS50122 CHEB; PS50110 RESPONSE_REGULATORY
Important sites: ACT_SITE 175-175 ACT_SITE 201-201 ACT_SITE 297-297
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPGIRVLVVDDSVVIRKLVSDLLSADPDIEVVGTAVNGRAALQKVAQLRPDLVTMDIEMP CCCCEEEEECCHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHCCCCEEEEEECCC EMDGIESVRAIRATGNKVPIIMFSTLTERGAVATLDALGAGASDYVPKPANVGSVGRSME CCCCHHHHHHHHHCCCCCEEEEEECCCCCCCEEEHHHHCCCCCCCCCCCCCCCHHHHHHH QVREALIPRIKSLVPRRGITPHPAGVTVAPTATVQLHAPATPPLGGHRLLVIGSSTGGPE HHHHHHHHHHHHHHCCCCCCCCCCCEEECCCEEEEEECCCCCCCCCCEEEEEECCCCCHH ALSALLHTLPPLSVPVAVVQHMPPLFTRQFAARLDRQLPYDVVEAEHNQPLRPGTVAIAP HHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCEEEECC GDYHLEVTTDAAGLRTRLTQAPPENYCRPAVDVLFRSAVAAVGPAVLAAVLTGMGSDGCK CCEEEEEECCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC GARLIVERGGSVLAQDQATSVVWGMPGAVATAGLAERVLPLLELGPEILRRLARQRPSLV CCEEEEECCCCEEECCCCCEEEECCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCC PAGALS CCCCCC >Mature Secondary Structure PGIRVLVVDDSVVIRKLVSDLLSADPDIEVVGTAVNGRAALQKVAQLRPDLVTMDIEMP CCCEEEEECCHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHCCCCEEEEEECCC EMDGIESVRAIRATGNKVPIIMFSTLTERGAVATLDALGAGASDYVPKPANVGSVGRSME CCCCHHHHHHHHHCCCCCEEEEEECCCCCCCEEEHHHHCCCCCCCCCCCCCCCHHHHHHH QVREALIPRIKSLVPRRGITPHPAGVTVAPTATVQLHAPATPPLGGHRLLVIGSSTGGPE HHHHHHHHHHHHHHCCCCCCCCCCCEEECCCEEEEEECCCCCCCCCCEEEEEECCCCCHH ALSALLHTLPPLSVPVAVVQHMPPLFTRQFAARLDRQLPYDVVEAEHNQPLRPGTVAIAP HHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCEEEECC GDYHLEVTTDAAGLRTRLTQAPPENYCRPAVDVLFRSAVAAVGPAVLAAVLTGMGSDGCK CCEEEEEECCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC GARLIVERGGSVLAQDQATSVVWGMPGAVATAGLAERVLPLLELGPEILRRLARQRPSLV CCEEEEECCCCEEECCCCCEEEECCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCC PAGALS CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA