| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119717822
Identifier: 119717822
GI number: 119717822
Start: 3817577
End: 3818482
Strand: Reverse
Name: 119717822
Synonym: Noca_3600
Alternate gene names: NA
Gene position: 3818482-3817577 (Counterclockwise)
Preceding gene: 119717823
Following gene: 119717821
Centisome position: 76.59
GC content: 76.27
Gene sequence:
>906_bases ATGCCGTACTCCCTGCTGGGCGGACATGCGATCGGGTTCGACCTCGCCCGGCTCGGCCGTGGTCGCCAGGCGGCCGCCGT CCTGCGGACCGCGCTCACCGCTGACGTCGCAGACCTGGACGCGTGGGCCGCGCAGCACCCGGGACCGGTGCGCCGGAGCG ACTGGCTGCGGGCCGCCGCACGCGCCGACGAGCGGGCGGCCACCGTCCGGTCGATGCTGCCCCTGGCCGGCGCGGCCGTC GAGGAGGCCGTCACGACCGGGGCGTCCACGCTCCTGCGTCGCCTCGAGACGAGCCTGCTCGGTGACACGCACGCCCTGGA CCACTTCGTCCGGCACGAGCTCCTGGACTGGACCTGGATCCACTCCGGCCCGATGAGCGTGCAGGACCCGACCGCTTCGG CCGCCGCGGACGTGCTGTCCGACGCCGCGGTCAGCGGCTTCCTCGGGGACCGGCTCGACCCGGGAGTGCGGCGCGCGCTG GTCGCGCCGTACCTGCGCGCGGACCTGCCGACCCGCGACGAGACGGCCTCGACCGGGATGGGCCGCCTCGACCGGGTGCT CGACCGGCTGGCCGACGGCGACGAGGAGGTCCGGGCCGCCTGGCGCCGGGTCGTGGACGAGAACCGGGTGCGCACGGCCG AGTGGGCGCCGGCGATGCACCAGGCGAGCTGGGCGGTGTCGATGGCCGGTCGGCTGCGGCTCGCCTGCGACGCCCAGCTC GCCGGCGTCATCGCCTTCCAGCTCGCCGGGCTCACGCCCCGGGACGCGGCGTACGGCGTCTGGAACGCGGTCTCCGGCGT CCTGCAGGCGGTGGCGATCGCCGACCTGCTGCCGGCCACCGCCTCGACGGTGCTGCTGCGCCCGTGGCACCTGGTGTACG GCGAGGGACCGATCTTCGGGGCCTGA
Upstream 100 bases:
>100_bases GACCTCGCCAGAATGGCTACTGACCTGCGTGGGGCCGTCGCCGGCTTCACGTCCTGACCCGGCCCGGCCGGACCGCTGTT CGTGAAGGGGGAGTGCCACC
Downstream 100 bases:
>100_bases CATCCGGACCTGGGTGCGTCGCACTCCTTAGGTATCCGCCCGCGCCGCCGATGGTCACTACGTCCGCAGCCTGGCGGACA GGACGAGAGGACGCCCATGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 301; Mature: 300
Protein sequence:
>301_residues MPYSLLGGHAIGFDLARLGRGRQAAAVLRTALTADVADLDAWAAQHPGPVRRSDWLRAAARADERAATVRSMLPLAGAAV EEAVTTGASTLLRRLETSLLGDTHALDHFVRHELLDWTWIHSGPMSVQDPTASAAADVLSDAAVSGFLGDRLDPGVRRAL VAPYLRADLPTRDETASTGMGRLDRVLDRLADGDEEVRAAWRRVVDENRVRTAEWAPAMHQASWAVSMAGRLRLACDAQL AGVIAFQLAGLTPRDAAYGVWNAVSGVLQAVAIADLLPATASTVLLRPWHLVYGEGPIFGA
Sequences:
>Translated_301_residues MPYSLLGGHAIGFDLARLGRGRQAAAVLRTALTADVADLDAWAAQHPGPVRRSDWLRAAARADERAATVRSMLPLAGAAV EEAVTTGASTLLRRLETSLLGDTHALDHFVRHELLDWTWIHSGPMSVQDPTASAAADVLSDAAVSGFLGDRLDPGVRRAL VAPYLRADLPTRDETASTGMGRLDRVLDRLADGDEEVRAAWRRVVDENRVRTAEWAPAMHQASWAVSMAGRLRLACDAQL AGVIAFQLAGLTPRDAAYGVWNAVSGVLQAVAIADLLPATASTVLLRPWHLVYGEGPIFGA >Mature_300_residues PYSLLGGHAIGFDLARLGRGRQAAAVLRTALTADVADLDAWAAQHPGPVRRSDWLRAAARADERAATVRSMLPLAGAAVE EAVTTGASTLLRRLETSLLGDTHALDHFVRHELLDWTWIHSGPMSVQDPTASAAADVLSDAAVSGFLGDRLDPGVRRALV APYLRADLPTRDETASTGMGRLDRVLDRLADGDEEVRAAWRRVVDENRVRTAEWAPAMHQASWAVSMAGRLRLACDAQLA GVIAFQLAGLTPRDAAYGVWNAVSGVLQAVAIADLLPATASTVLLRPWHLVYGEGPIFGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32142; Mature: 32011
Theoretical pI: Translated: 6.31; Mature: 6.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPYSLLGGHAIGFDLARLGRGRQAAAVLRTALTADVADLDAWAAQHPGPVRRSDWLRAAA CCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH RADERAATVRSMLPLAGAAVEEAVTTGASTLLRRLETSLLGDTHALDHFVRHELLDWTWI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHEE HSGPMSVQDPTASAAADVLSDAAVSGFLGDRLDPGVRRALVAPYLRADLPTRDETASTGM CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCHHHCCH GRLDRVLDRLADGDEEVRAAWRRVVDENRVRTAEWAPAMHQASWAVSMAGRLRLACDAQL HHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHCHHHHHHHHHHHHHCCEEEEEHHHH AGVIAFQLAGLTPRDAAYGVWNAVSGVLQAVAIADLLPATASTVLLRPWHLVYGEGPIFG HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCC A C >Mature Secondary Structure PYSLLGGHAIGFDLARLGRGRQAAAVLRTALTADVADLDAWAAQHPGPVRRSDWLRAAA CCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH RADERAATVRSMLPLAGAAVEEAVTTGASTLLRRLETSLLGDTHALDHFVRHELLDWTWI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHEE HSGPMSVQDPTASAAADVLSDAAVSGFLGDRLDPGVRRALVAPYLRADLPTRDETASTGM CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCHHHCCH GRLDRVLDRLADGDEEVRAAWRRVVDENRVRTAEWAPAMHQASWAVSMAGRLRLACDAQL HHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHCHHHHHHHHHHHHHCCEEEEEHHHH AGVIAFQLAGLTPRDAAYGVWNAVSGVLQAVAIADLLPATASTVLLRPWHLVYGEGPIFG HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCC A C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA