Click here to switch to the map view.

The map label for this gene is acrR [C]

Identifier: 119717730

GI number: 119717730

Start: 3715715

End: 3716317

Strand: Reverse

Name: acrR [C]

Synonym: Noca_3508

Alternate gene names: 119717730

Gene position: 3716317-3715715 (Counterclockwise)

Preceding gene: 119717737

Following gene: 119717729

Centisome position: 74.54

GC content: 72.97

Gene sequence:

>603_bases
ATGGGCCCGCGGCACGCCCCCGTGCAAGACCGCTCCCGGGCTATGGTCGACCGGCTCCTCGAGGCGGCCACTCGCGTCCT
CGCCGAGCGCGGGTACGCCGGATTGAGCACCAACCGGGTCGCGGCCGTGGCCGGGGTCAGCGTCGGCTCGCTCTACCGCT
ACTTCGGCGACAAGGACGACCTGGTGCGCGAGCTGCGGGTCCGCAGCACCGCGGACATCCTGGCCGATCTCACGACGGTG
CTGTCCGCAGCGGCGCCGCTGGCCACCCGCGACGCGATCCGCGAGGTCATCGCGACCCTGGTGGCCGCCCTGCAACGGCA
CCGGGCCCTCACCGCAGCGCTGGTCAACGAGGTGCCGCTCGGCGCGCAGAGCAACGTGCTGCCCGAGGTGGAGCAGCAGC
TGGCGCAGTTCACCCGGATGTTCGTCGCGATCCACGCCCCGCACCTGGAGCCGGCCGAGGCCGAGGCGCGCATCTACCTC
GCGCTCGGGGTCACGTTGAGCAGCTGCCTGCGGATCGCGCTCGATCCGCCCGTCGGGATCCCCGAGCAGCGCCTCGTCGA
CCTGACGGCCGACCTGCTGCACACCGGCCTGGTCCTGTCCTGA

Upstream 100 bases:

>100_bases
ACCGGGTGGGCGTCGGGAGCAGGTCAGTCATGACACCACGATAAAGTGAGCAAATGCTCATGTTCTACTCGCGTTCTGCC
CCGGGGTGGGGGGAGCGCTG

Downstream 100 bases:

>100_bases
ACCGGCGCCGCGGCCCGGACCTTCACGACGACTCGGATGGGGACCACCGCCGCACTCACGTCGATCGCGGCCGCGCTCGC
GACCGACGTGGTGGTGCCAG

Product: regulatory protein TetR

Products: NA

Alternate protein names: TetR Family Transcriptional Regulator; Regulatory Protein TetR

Number of amino acids: Translated: 200; Mature: 199

Protein sequence:

>200_residues
MGPRHAPVQDRSRAMVDRLLEAATRVLAERGYAGLSTNRVAAVAGVSVGSLYRYFGDKDDLVRELRVRSTADILADLTTV
LSAAAPLATRDAIREVIATLVAALQRHRALTAALVNEVPLGAQSNVLPEVEQQLAQFTRMFVAIHAPHLEPAEAEARIYL
ALGVTLSSCLRIALDPPVGIPEQRLVDLTADLLHTGLVLS

Sequences:

>Translated_200_residues
MGPRHAPVQDRSRAMVDRLLEAATRVLAERGYAGLSTNRVAAVAGVSVGSLYRYFGDKDDLVRELRVRSTADILADLTTV
LSAAAPLATRDAIREVIATLVAALQRHRALTAALVNEVPLGAQSNVLPEVEQQLAQFTRMFVAIHAPHLEPAEAEARIYL
ALGVTLSSCLRIALDPPVGIPEQRLVDLTADLLHTGLVLS
>Mature_199_residues
GPRHAPVQDRSRAMVDRLLEAATRVLAERGYAGLSTNRVAAVAGVSVGSLYRYFGDKDDLVRELRVRSTADILADLTTVL
SAAAPLATRDAIREVIATLVAALQRHRALTAALVNEVPLGAQSNVLPEVEQQLAQFTRMFVAIHAPHLEPAEAEARIYLA
LGVTLSSCLRIALDPPVGIPEQRLVDLTADLLHTGLVLS

Specific function: Potential Regulator Protein For The Acrab Genes. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21485; Mature: 21354

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: PS01081 HTH_TETR_1 ; PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGPRHAPVQDRSRAMVDRLLEAATRVLAERGYAGLSTNRVAAVAGVSVGSLYRYFGDKDD
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHH
LVRELRVRSTADILADLTTVLSAAAPLATRDAIREVIATLVAALQRHRALTAALVNEVPL
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GAQSNVLPEVEQQLAQFTRMFVAIHAPHLEPAEAEARIYLALGVTLSSCLRIALDPPVGI
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHEEEEEEHHHHHHHHHHHCCCCCCC
PEQRLVDLTADLLHTGLVLS
CHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
GPRHAPVQDRSRAMVDRLLEAATRVLAERGYAGLSTNRVAAVAGVSVGSLYRYFGDKDD
CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHH
LVRELRVRSTADILADLTTVLSAAAPLATRDAIREVIATLVAALQRHRALTAALVNEVPL
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GAQSNVLPEVEQQLAQFTRMFVAIHAPHLEPAEAEARIYLALGVTLSSCLRIALDPPVGI
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHEEEEEEHHHHHHHHHHHCCCCCCC
PEQRLVDLTADLLHTGLVLS
CHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA