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The map label for this gene is lytB [H]

Identifier: 119717737

GI number: 119717737

Start: 3726055

End: 3727308

Strand: Reverse

Name: lytB [H]

Synonym: Noca_3515

Alternate gene names: 119717737

Gene position: 3727308-3726055 (Counterclockwise)

Preceding gene: 119717738

Following gene: 119717730

Centisome position: 74.76

GC content: 74.0

Gene sequence:

>1254_bases
ATGCGATTGGGGTTCCCATCCGTCACAGTCGTCCCAGAGGTCACCATGCGCGCCGTGTCGAGCCTGCTCGCGCTCGCGCT
GACGACCCCGATGCTGGCCGCGGGCGCGCTGGCGACCGCCGGCCCGGCCGCGGCCGCGGAGGCGGAGGCGGACGTCTGGA
AGGTGCCCTCGCACGCGAGCATCACGATCAAGGGTCGCGGCTACGGGCACGGCCACGGGATGTCGCAGTACGGCGCCGAG
GGCGCCGCCCGCCAGGGCCTCACCCACCGCGAGATCGCGGAGTTCTACTACCCCGGCACCGAGTGGGGGACCAGCAAGGG
CCGGATCAGCGTGCTGCTGACCGCCGACACCACCGACGACCTGGTCGTGAACGCCCGGTCCGGGCTCACCGTCCGCGACA
CCGCGGTCAAGGGCCGGGTCGCGCTGCCCGACAACGGCGCGAAGCGCTGGCGGGTCGCGGTCGGCAAGGACGGGGTGAAC
CGCGTCTCCTACCGGGACCGGCGCTGGCAGCCGTGGCGGGACCTGACGGGCCAGGGCGAGTTCTACGCGGGCGGTGAGCC
GGTCACGCTGGTCACCCCGAGCGGTGAGCGCTCCTACCGGGGCCGGCTCCGCGTCGCGGTGACCGCCACCGGCGAGCGGG
TCACGGTCAACGACGTCGACCTGGAGAGCTACCTCAGGGGCGTCGTCCCGCTGGAGATCCCGGCGCTGTGGAGCACCGAG
GCGGTCCGCGCCCAGGCGGTGGCGGCCCGCACCTACGCGTCGTACGAGCGCCGGCACCCGCAGTCGCGGGCCTATCAGCT
CTGCGACACCTGGTCCTGCCAGGTCTACGGCGGGGTCGACGCGGAGCACCCCGCCTCCGACCGAGCCGTCGATGCCACCG
CCGGGTCGATCCTCACCAGCGACGGCGCGCCGGCGTTCACCCAGTTCGGGTCGAGCAGCGGCGGTTGGACGTCGGCGGGC
TCGGTGCCCTACCTGCCGGCCAAGCGTGACCCGTACGACGGCTGGTCGGGCAACCCGGTGCACACCTGGACCACGACCGT
CGACGACGCGCGCCTCGAGCAGGCCTGGCCCGCGCTCGGTGATCTGAGGCGGATCGCGGTCACCGCGCGGGACGGCAACG
GCCGTTGGGGCGGCCGGGTCCGCACGATCGCGATGCGCGGCAGCCAGGGCAAGGTCGTCGTCTCCGGGGACACGTTCCGG
GCCGTGCTCGGGCTGCGCTCGACCTGGGTGACCTTCAGGGTCGCCGCTCGCTGA

Upstream 100 bases:

>100_bases
CGGCTCGGCCTTCCGCTCCTACCTGGGCCTGCGCACCACGCTGCTGGAAATTACATAACTGTAGTTCTCTGGTTCACATT
GCGGACGGGTGTGACCCGTG

Downstream 100 bases:

>100_bases
GCACCGGGCGGAGCACCAGCCCGGCGACCAGCGCCCAGAAGGCCGCGCCGATGCCGAGTACGGTGATGCCGGAGGCGGCG
ACGAGGAAGCACACGACGAC

Product: SpoIID/LytB domain-containing protein

Products: NA

Alternate protein names: Cell wall-associated polypeptide CWBP76; CWBP76; Modifier protein of major autolysin [H]

Number of amino acids: Translated: 417; Mature: 417

Protein sequence:

>417_residues
MRLGFPSVTVVPEVTMRAVSSLLALALTTPMLAAGALATAGPAAAAEAEADVWKVPSHASITIKGRGYGHGHGMSQYGAE
GAARQGLTHREIAEFYYPGTEWGTSKGRISVLLTADTTDDLVVNARSGLTVRDTAVKGRVALPDNGAKRWRVAVGKDGVN
RVSYRDRRWQPWRDLTGQGEFYAGGEPVTLVTPSGERSYRGRLRVAVTATGERVTVNDVDLESYLRGVVPLEIPALWSTE
AVRAQAVAARTYASYERRHPQSRAYQLCDTWSCQVYGGVDAEHPASDRAVDATAGSILTSDGAPAFTQFGSSSGGWTSAG
SVPYLPAKRDPYDGWSGNPVHTWTTTVDDARLEQAWPALGDLRRIAVTARDGNGRWGGRVRTIAMRGSQGKVVVSGDTFR
AVLGLRSTWVTFRVAAR

Sequences:

>Translated_417_residues
MRLGFPSVTVVPEVTMRAVSSLLALALTTPMLAAGALATAGPAAAAEAEADVWKVPSHASITIKGRGYGHGHGMSQYGAE
GAARQGLTHREIAEFYYPGTEWGTSKGRISVLLTADTTDDLVVNARSGLTVRDTAVKGRVALPDNGAKRWRVAVGKDGVN
RVSYRDRRWQPWRDLTGQGEFYAGGEPVTLVTPSGERSYRGRLRVAVTATGERVTVNDVDLESYLRGVVPLEIPALWSTE
AVRAQAVAARTYASYERRHPQSRAYQLCDTWSCQVYGGVDAEHPASDRAVDATAGSILTSDGAPAFTQFGSSSGGWTSAG
SVPYLPAKRDPYDGWSGNPVHTWTTTVDDARLEQAWPALGDLRRIAVTARDGNGRWGGRVRTIAMRGSQGKVVVSGDTFR
AVLGLRSTWVTFRVAAR
>Mature_417_residues
MRLGFPSVTVVPEVTMRAVSSLLALALTTPMLAAGALATAGPAAAAEAEADVWKVPSHASITIKGRGYGHGHGMSQYGAE
GAARQGLTHREIAEFYYPGTEWGTSKGRISVLLTADTTDDLVVNARSGLTVRDTAVKGRVALPDNGAKRWRVAVGKDGVN
RVSYRDRRWQPWRDLTGQGEFYAGGEPVTLVTPSGERSYRGRLRVAVTATGERVTVNDVDLESYLRGVVPLEIPALWSTE
AVRAQAVAARTYASYERRHPQSRAYQLCDTWSCQVYGGVDAEHPASDRAVDATAGSILTSDGAPAFTQFGSSSGGWTSAG
SVPYLPAKRDPYDGWSGNPVHTWTTTVDDARLEQAWPALGDLRRIAVTARDGNGRWGGRVRTIAMRGSQGKVVVSGDTFR
AVLGLRSTWVTFRVAAR

Specific function: Possibly involved in cell wall metabolism during spore formation. Enhances the amidase activity approximately threefold [H]

COG id: COG2385

COG function: function code D; Sporulation protein and related proteins

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein. Secreted, cell wall. Note=Cell wall localization shown in PubMed:11987133 [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007253
- InterPro:   IPR013486
- InterPro:   IPR013693 [H]

Pfam domain/function: PF04122 CW_binding_2; PF08486 SpoIID [H]

EC number: NA

Molecular weight: Translated: 44749; Mature: 44749

Theoretical pI: Translated: 9.87; Mature: 9.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLGFPSVTVVPEVTMRAVSSLLALALTTPMLAAGALATAGPAAAAEAEADVWKVPSHAS
CCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCEEECCCCCE
ITIKGRGYGHGHGMSQYGAEGAARQGLTHREIAEFYYPGTEWGTSKGRISVLLTADTTDD
EEEEECCCCCCCCCHHHCCCCHHHCCCCHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCC
LVVNARSGLTVRDTAVKGRVALPDNGAKRWRVAVGKDGVNRVSYRDRRWQPWRDLTGQGE
EEEECCCCCEEEEECCCCEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCCHHCCCCCCC
FYAGGEPVTLVTPSGERSYRGRLRVAVTATGERVTVNDVDLESYLRGVVPLEIPALWSTE
EEECCCEEEEECCCCCCCCCCEEEEEEEECCCEEEEECCCHHHHHCCCCCEEECCCCCCH
AVRAQAVAARTYASYERRHPQSRAYQLCDTWSCQVYGGVDAEHPASDRAVDATAGSILTS
HHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCEEEEECCCCCCCCCCCEEECCCCCEEEC
DGAPAFTQFGSSSGGWTSAGSVPYLPAKRDPYDGWSGNPVHTWTTTVDDARLEQAWPALG
CCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHCCCHH
DLRRIAVTARDGNGRWGGRVRTIAMRGSQGKVVVSGDTFRAVLGLRSTWVTFRVAAR
CCEEEEEEEECCCCCCCCEEEEEEEECCCCEEEECCCHHHHHHHCCCEEEEEEEECC
>Mature Secondary Structure
MRLGFPSVTVVPEVTMRAVSSLLALALTTPMLAAGALATAGPAAAAEAEADVWKVPSHAS
CCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCEEECCCCCE
ITIKGRGYGHGHGMSQYGAEGAARQGLTHREIAEFYYPGTEWGTSKGRISVLLTADTTDD
EEEEECCCCCCCCCHHHCCCCHHHCCCCHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCC
LVVNARSGLTVRDTAVKGRVALPDNGAKRWRVAVGKDGVNRVSYRDRRWQPWRDLTGQGE
EEEECCCCCEEEEECCCCEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCCHHCCCCCCC
FYAGGEPVTLVTPSGERSYRGRLRVAVTATGERVTVNDVDLESYLRGVVPLEIPALWSTE
EEECCCEEEEECCCCCCCCCCEEEEEEEECCCEEEEECCCHHHHHCCCCCEEECCCCCCH
AVRAQAVAARTYASYERRHPQSRAYQLCDTWSCQVYGGVDAEHPASDRAVDATAGSILTS
HHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCEEEEECCCCCCCCCCCEEECCCCCEEEC
DGAPAFTQFGSSSGGWTSAGSVPYLPAKRDPYDGWSGNPVHTWTTTVDDARLEQAWPALG
CCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHCCCHH
DLRRIAVTARDGNGRWGGRVRTIAMRGSQGKVVVSGDTFRAVLGLRSTWVTFRVAAR
CCEEEEEEEECCCCCCCCEEEEEEEECCCCEEEECCCHHHHHHHCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1357079; 1356138; 9384377 [H]