| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119717063
Identifier: 119717063
GI number: 119717063
Start: 3009126
End: 3009689
Strand: Reverse
Name: 119717063
Synonym: Noca_2839
Alternate gene names: NA
Gene position: 3009689-3009126 (Counterclockwise)
Preceding gene: 119717064
Following gene: 119717061
Centisome position: 60.36
GC content: 76.24
Gene sequence:
>564_bases ATGAGCGCCCGCACCACGCCGGCGCGCGTCCGCCCCGGCGGCCTTCGTGAGGTCGGACCGTTCGTGACGGCCTTCGCGTG GCTCGCGGGCCGGGTCAGCGGCACCGTGCCGCCGGCGGTCTTCCTCACGCTCGGCCGGAACCGCCGGCTGTTCTGGGGCT GGCTGTTCTTCGCCGGCCGGCTGATGCCGGGTGGCCGGCTGCCGCGGCGCGACACCGAGCTGGTGATCCTGCGGGTCGCG GTGCTCACCGGTTCGGAGTACGAGCACACCCAGCACGCGCGGCTGGCCCGCCGGGCCGGCCTCGATGCCGCGGCCGTCGA CCGGGCGAGCGACGGCCCGGACGCGCCGGGCTGGACCCCGCGGCAGGCGCTGCTGCTGCAGGCGACCGACGAGCTCCACC ACACCCGGGACCTCTCCGACCCGACCTGGGCGGCGCTGCGTGCGGAGCTCGACGAGCGCCTGTGCATCGAGCTGCTGATG CTCGTCGGCCACTACGAGATGCTCTCGACCACCCTCACCGCGCTGCGCGTGCAGCCGGACGCGGCGCGGGGGACCGGGCG GTGA
Upstream 100 bases:
>100_bases GGTGCCCGCCGGCGTACGCGCTGATGATGACCGTCCTCAACCGCGGCGCGAACCGGGCGCTGCCCGCCGTCGCCCGCGCC CGGCGCGCGGACCGTGCGGC
Downstream 100 bases:
>100_bases GCGCCGCGCCCACCCACGGTCCTACCAGGAGAGCCCCAGGTCCTCACAGCAGCGGCCGCAGCGGCCCGAGAATCATCTCG GTGAACTTGCGGTGCAGGTC
Product: carboxymuconolactone decarboxylase
Products: NA
Alternate protein names: Alkylhydroperoxidase Like Protein; Alkylhydroperoxidase; 4-Carboxymuconolactone Decarboxylase
Number of amino acids: Translated: 187; Mature: 186
Protein sequence:
>187_residues MSARTTPARVRPGGLREVGPFVTAFAWLAGRVSGTVPPAVFLTLGRNRRLFWGWLFFAGRLMPGGRLPRRDTELVILRVA VLTGSEYEHTQHARLARRAGLDAAAVDRASDGPDAPGWTPRQALLLQATDELHHTRDLSDPTWAALRAELDERLCIELLM LVGHYEMLSTTLTALRVQPDAARGTGR
Sequences:
>Translated_187_residues MSARTTPARVRPGGLREVGPFVTAFAWLAGRVSGTVPPAVFLTLGRNRRLFWGWLFFAGRLMPGGRLPRRDTELVILRVA VLTGSEYEHTQHARLARRAGLDAAAVDRASDGPDAPGWTPRQALLLQATDELHHTRDLSDPTWAALRAELDERLCIELLM LVGHYEMLSTTLTALRVQPDAARGTGR >Mature_186_residues SARTTPARVRPGGLREVGPFVTAFAWLAGRVSGTVPPAVFLTLGRNRRLFWGWLFFAGRLMPGGRLPRRDTELVILRVAV LTGSEYEHTQHARLARRAGLDAAAVDRASDGPDAPGWTPRQALLLQATDELHHTRDLSDPTWAALRAELDERLCIELLML VGHYEMLSTTLTALRVQPDAARGTGR
Specific function: Unknown
COG id: COG2128
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20613; Mature: 20482
Theoretical pI: Translated: 11.20; Mature: 11.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSARTTPARVRPGGLREVGPFVTAFAWLAGRVSGTVPPAVFLTLGRNRRLFWGWLFFAGR CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHH LMPGGRLPRRDTELVILRVAVLTGSEYEHTQHARLARRAGLDAAAVDRASDGPDAPGWTP CCCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCH RQALLLQATDELHHTRDLSDPTWAALRAELDERLCIELLMLVGHYEMLSTTLTALRVQPD HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC AARGTGR CCCCCCC >Mature Secondary Structure SARTTPARVRPGGLREVGPFVTAFAWLAGRVSGTVPPAVFLTLGRNRRLFWGWLFFAGR CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHH LMPGGRLPRRDTELVILRVAVLTGSEYEHTQHARLARRAGLDAAAVDRASDGPDAPGWTP CCCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCH RQALLLQATDELHHTRDLSDPTWAALRAELDERLCIELLMLVGHYEMLSTTLTALRVQPD HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC AARGTGR CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA