Definition Nocardioides sp. JS614 chromosome, complete genome.
Accession NC_008699
Length 4,985,871

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The map label for this gene is yjjL [C]

Identifier: 119717059

GI number: 119717059

Start: 3003803

End: 3005089

Strand: Reverse

Name: yjjL [C]

Synonym: Noca_2835

Alternate gene names: 119717059

Gene position: 3005089-3003803 (Counterclockwise)

Preceding gene: 119717060

Following gene: 119717055

Centisome position: 60.27

GC content: 72.11

Gene sequence:

>1287_bases
GTGACGCCGAGCCTCCGCAGCCCGTACGCGGTCTGGGGGGTCGGCCTCCTCGTCTACCTGGTGGCCGTCTTCCACCGCTC
GTCGCTGGCGGTCGCCGGCCTCGCGGCCACCGACCGGTTCGACATCACCGCCGCCCAGCTGGCGACGTTCACGATGCTGC
AGCTGCTGGTGTACGCCGGCCTCCAGATCCCGGTCGGCCTGCTCGTGGACCGGTTCGGGCCGCGCAGCGTGCTGCTGACC
GGAACCCTGCTGCTCACCGGGGCGCAGGTCGGCTTCGCGCTGGCCTCGACCTACAGCCTGGCGCTGCTGGCCCGGGTCTT
CGTCGGGATGGGCGACGCGATGACCTTCATCTGCGTGCTCCGACTGGTGAGCACCTGGTTCCCGGGCCGGCGGATCCCGC
TGATCACCCAGCTGACCGGCACCTTCGGCCAGCTCGGCGCGATCGCGGCCGCGGTGCCGATGACCTGGGCGCTGCGGGAC
CTGGGGTGGACGACCGCCTACCTGATCGCCGCGTCACTCGGCGTCCTCCTCACCGTCGCGCTGCTGGCTGTGGTGCGCGA
CGCCCCACACCTGACCCACCTGCGCGGTCCGACGATGTCCCTGGCCGCCGTCCGCGCCAGCCTGACCGCCTCCTGGGCCC
ATCCCGGCACCCGGCTCGGCTTCTGGATGCACTTCGTGACGCCGTTCAGCGCGACGGCGCTCAGCCTGCTGTGGGGCTAC
CCGTTCTTCGTGCTCGGGGAGGGGCGGAGCCCCACGACGGCAGGCGTGCTCCTGACGATCATGGTGGTGGCGGTCATGTG
CGCCGGCCCGGTCCTGGGCTGGCTCGTCGGTGCCCATCCGTGGCAGCGCTCGACGATGGTGCTGACGATCGTGGGCTCGG
TCGTCGCGGTCTGGACGGTGGTGCTGGCCTGGCCGGGGGACGCGCCACTGTGGTTGCTGGTCCTGCTGGTCGTCGTGGTC
GGCGTCGGTGGCCCGGCCTCGATGATCGGCTTCGACCTCGGGCGCACGTCGAACCCCGACGAGCGCTTCGCCAGCGCGAG
CGGGATCATCAACCAGGGCGGCTTCCTGGCCAGCCTGCTGCTGGTGATCGCGATCGGCGTCATCCTCGACTGGCGCACCC
CGGGGACGAGCTCGGCGTACGGCCCGTCCGCGTTCCGCTGGGCGATGAGCGCCCAGTACGTGCTGTGGGCCGTGGGGCTC
ACCCAGGTCTACCGCTACCGGGTCCGGGCCCGTCGCGTGGTCGACCGCGACGAGCTCGAGGGCGTGAACAAGACTCCGGC
CGGCTGA

Upstream 100 bases:

>100_bases
CGCTGTCGCTGCTCGACCACCGGGCGCCGCACCCGTCGCCGGCCAGGGACGGCCGGCACGGATTCGAGCGCCAGGGCCGG
CCGGACCTAGGATTCTGGGA

Downstream 100 bases:

>100_bases
GCGGACCGGTCAGTCCGACCGCCGGAGGCACGTGAGGTGCCAGTGGTTGCGGCCCTCCACCCGGTCGTAGGAGAGGTTGT
CGACCGCGGCCATCGCCAGG

Product: major facilitator transporter

Products: NA

Alternate protein names: Facilitator Superfamily Protein; Facilitator Superfamily Permease; Facilitator Superfamily Transporter; Transmembrane Transporter; Sugar Phosphate Permease; Facilitator Family Transporter; Nitrate/Nitrite Transporter; MFS Transporter; Permease; Facilitator Family Oxalate/Formate Antiporter; Facilitator Membrane Proteins; Facilitator Family Hexuronate Transporter; Permease Of Facilitator Superfamily; Transporter Facilitator Family Protein; Facilitator Superfamily Protein Permease; MFS Family Transporter; Transporter MFS Superfamily; Facilitator Family Protein; Facilitator Superfamily Transporter Transporter; MFS Superfamily Transporter

Number of amino acids: Translated: 428; Mature: 427

Protein sequence:

>428_residues
MTPSLRSPYAVWGVGLLVYLVAVFHRSSLAVAGLAATDRFDITAAQLATFTMLQLLVYAGLQIPVGLLVDRFGPRSVLLT
GTLLLTGAQVGFALASTYSLALLARVFVGMGDAMTFICVLRLVSTWFPGRRIPLITQLTGTFGQLGAIAAAVPMTWALRD
LGWTTAYLIAASLGVLLTVALLAVVRDAPHLTHLRGPTMSLAAVRASLTASWAHPGTRLGFWMHFVTPFSATALSLLWGY
PFFVLGEGRSPTTAGVLLTIMVVAVMCAGPVLGWLVGAHPWQRSTMVLTIVGSVVAVWTVVLAWPGDAPLWLLVLLVVVV
GVGGPASMIGFDLGRTSNPDERFASASGIINQGGFLASLLLVIAIGVILDWRTPGTSSAYGPSAFRWAMSAQYVLWAVGL
TQVYRYRVRARRVVDRDELEGVNKTPAG

Sequences:

>Translated_428_residues
MTPSLRSPYAVWGVGLLVYLVAVFHRSSLAVAGLAATDRFDITAAQLATFTMLQLLVYAGLQIPVGLLVDRFGPRSVLLT
GTLLLTGAQVGFALASTYSLALLARVFVGMGDAMTFICVLRLVSTWFPGRRIPLITQLTGTFGQLGAIAAAVPMTWALRD
LGWTTAYLIAASLGVLLTVALLAVVRDAPHLTHLRGPTMSLAAVRASLTASWAHPGTRLGFWMHFVTPFSATALSLLWGY
PFFVLGEGRSPTTAGVLLTIMVVAVMCAGPVLGWLVGAHPWQRSTMVLTIVGSVVAVWTVVLAWPGDAPLWLLVLLVVVV
GVGGPASMIGFDLGRTSNPDERFASASGIINQGGFLASLLLVIAIGVILDWRTPGTSSAYGPSAFRWAMSAQYVLWAVGL
TQVYRYRVRARRVVDRDELEGVNKTPAG
>Mature_427_residues
TPSLRSPYAVWGVGLLVYLVAVFHRSSLAVAGLAATDRFDITAAQLATFTMLQLLVYAGLQIPVGLLVDRFGPRSVLLTG
TLLLTGAQVGFALASTYSLALLARVFVGMGDAMTFICVLRLVSTWFPGRRIPLITQLTGTFGQLGAIAAAVPMTWALRDL
GWTTAYLIAASLGVLLTVALLAVVRDAPHLTHLRGPTMSLAAVRASLTASWAHPGTRLGFWMHFVTPFSATALSLLWGYP
FFVLGEGRSPTTAGVLLTIMVVAVMCAGPVLGWLVGAHPWQRSTMVLTIVGSVVAVWTVVLAWPGDAPLWLLVLLVVVVG
VGGPASMIGFDLGRTSNPDERFASASGIINQGGFLASLLLVIAIGVILDWRTPGTSSAYGPSAFRWAMSAQYVLWAVGLT
QVYRYRVRARRVVDRDELEGVNKTPAG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI2367379, Length=183, Percent_Identity=26.775956284153, Blast_Score=62, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45561; Mature: 45430

Theoretical pI: Translated: 10.55; Mature: 10.55

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPSLRSPYAVWGVGLLVYLVAVFHRSSLAVAGLAATDRFDITAAQLATFTMLQLLVYAG
CCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHEEECCCCCCCHHHHHHHHHHHHHHHHHCC
LQIPVGLLVDRFGPRSVLLTGTLLLTGAQVGFALASTYSLALLARVFVGMGDAMTFICVL
CCCCHHHHHHCCCCCHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
RLVSTWFPGRRIPLITQLTGTFGQLGAIAAAVPMTWALRDLGWTTAYLIAASLGVLLTVA
HHHHHCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
LLAVVRDAPHLTHLRGPTMSLAAVRASLTASWAHPGTRLGFWMHFVTPFSATALSLLWGY
HHHHHHCCCCHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
PFFVLGEGRSPTTAGVLLTIMVVAVMCAGPVLGWLVGAHPWQRSTMVLTIVGSVVAVWTV
CEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
VLAWPGDAPLWLLVLLVVVVGVGGPASMIGFDLGRTSNPDERFASASGIINQGGFLASLL
HHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCHHHHHHHHCCCCCCCHHHHHHH
LVIAIGVILDWRTPGTSSAYGPSAFRWAMSAQYVLWAVGLTQVYRYRVRARRVVDRDELE
HHHHHHHHEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHC
GVNKTPAG
CCCCCCCC
>Mature Secondary Structure 
TPSLRSPYAVWGVGLLVYLVAVFHRSSLAVAGLAATDRFDITAAQLATFTMLQLLVYAG
CCCCCCCHHHHHHHHHHHHHHHHHCCCHHHEEECCCCCCCHHHHHHHHHHHHHHHHHCC
LQIPVGLLVDRFGPRSVLLTGTLLLTGAQVGFALASTYSLALLARVFVGMGDAMTFICVL
CCCCHHHHHHCCCCCHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
RLVSTWFPGRRIPLITQLTGTFGQLGAIAAAVPMTWALRDLGWTTAYLIAASLGVLLTVA
HHHHHCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
LLAVVRDAPHLTHLRGPTMSLAAVRASLTASWAHPGTRLGFWMHFVTPFSATALSLLWGY
HHHHHHCCCCHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
PFFVLGEGRSPTTAGVLLTIMVVAVMCAGPVLGWLVGAHPWQRSTMVLTIVGSVVAVWTV
CEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
VLAWPGDAPLWLLVLLVVVVGVGGPASMIGFDLGRTSNPDERFASASGIINQGGFLASLL
HHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCHHHHHHHHCCCCCCCHHHHHHH
LVIAIGVILDWRTPGTSSAYGPSAFRWAMSAQYVLWAVGLTQVYRYRVRARRVVDRDELE
HHHHHHHHEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHC
GVNKTPAG
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA