| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119717055
Identifier: 119717055
GI number: 119717055
Start: 3000326
End: 3000880
Strand: Reverse
Name: 119717055
Synonym: Noca_2831
Alternate gene names: NA
Gene position: 3000880-3000326 (Counterclockwise)
Preceding gene: 119717059
Following gene: 119717054
Centisome position: 60.19
GC content: 71.17
Gene sequence:
>555_bases ATGACCAACATCGATCTCGGCCGCCCGGTCCAGGGTGACGTCGTGGAGCTGATCCTCGATGACCACCGTCGCTTCGAGGC GCTCCTGCGGGACCTGCGCGACAGGAGCTCGGACCGCGAGGCGGTCCGGCAGGCCTTCGCGGCACTGCACGTCGCGCACG CCGAGGCGGAGGAGAAGCACGTCTACCCCAAGCTCAAGCGCAAGGACGCCGTCGACGACGAGGAGGCCGACCACGGCGTG GAGGAGCACGCCGAGGGCAACGAGGCGCTGCTCGCCGTGCTGGAGCTGAAGGGCACCGACACCCAGGCGTTCGACGACGC CGTCGAGGAGCTGGCCCGTCTGGTCAACCACCACCTGACCGAGGAGGAGCTCACGATCCTCAACCCGGCCCGCGAGGAGG TGGGGGAGCGGGTGCGGTCCGAGCTCGGCGCCCGGTTCGCCGAGGAGCGGAACGCCCAGGTCGATGCCGACTGCGGTGCG CTGGAGAACGTCCGCCGGATCGTCGCCGAGGCTCGCCGCGACGGCCTGCTCGACGACGGCGAGGGCGAGCAGTAG
Upstream 100 bases:
>100_bases CCAGCCCCTTCATCGGCCGGTCGCGCCGGATCCTTACCCGTGCGGCCGGGTTCCGTGCCTGGCCCGGTTTGCGCCGGTCC CGGTCTGGTTACGTCCTCGC
Downstream 100 bases:
>100_bases GGCACGCGCGACCGGAGGAGCAGTGGAGGGCGCAGAGGAGGGGACACCACGCCGGCGCGTCGCGGCGATCCTGGCCATCG GCTGGGCGCTCGTGGTCGCC
Product: hemerythrin HHE cation binding domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 184; Mature: 183
Protein sequence:
>184_residues MTNIDLGRPVQGDVVELILDDHRRFEALLRDLRDRSSDREAVRQAFAALHVAHAEAEEKHVYPKLKRKDAVDDEEADHGV EEHAEGNEALLAVLELKGTDTQAFDDAVEELARLVNHHLTEEELTILNPAREEVGERVRSELGARFAEERNAQVDADCGA LENVRRIVAEARRDGLLDDGEGEQ
Sequences:
>Translated_184_residues MTNIDLGRPVQGDVVELILDDHRRFEALLRDLRDRSSDREAVRQAFAALHVAHAEAEEKHVYPKLKRKDAVDDEEADHGV EEHAEGNEALLAVLELKGTDTQAFDDAVEELARLVNHHLTEEELTILNPAREEVGERVRSELGARFAEERNAQVDADCGA LENVRRIVAEARRDGLLDDGEGEQ >Mature_183_residues TNIDLGRPVQGDVVELILDDHRRFEALLRDLRDRSSDREAVRQAFAALHVAHAEAEEKHVYPKLKRKDAVDDEEADHGVE EHAEGNEALLAVLELKGTDTQAFDDAVEELARLVNHHLTEEELTILNPAREEVGERVRSELGARFAEERNAQVDADCGAL ENVRRIVAEARRDGLLDDGEGEQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20644; Mature: 20513
Theoretical pI: Translated: 4.36; Mature: 4.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNIDLGRPVQGDVVELILDDHRRFEALLRDLRDRSSDREAVRQAFAALHVAHAEAEEKH CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH VYPKLKRKDAVDDEEADHGVEEHAEGNEALLAVLELKGTDTQAFDDAVEELARLVNHHLT CCHHHHHHCCCCCHHHHCCHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCC EEELTILNPAREEVGERVRSELGARFAEERNAQVDADCGALENVRRIVAEARRDGLLDDG HHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCC EGEQ CCCC >Mature Secondary Structure TNIDLGRPVQGDVVELILDDHRRFEALLRDLRDRSSDREAVRQAFAALHVAHAEAEEKH CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH VYPKLKRKDAVDDEEADHGVEEHAEGNEALLAVLELKGTDTQAFDDAVEELARLVNHHLT CCHHHHHHCCCCCHHHHCCHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCC EEELTILNPAREEVGERVRSELGARFAEERNAQVDADCGALENVRRIVAEARRDGLLDDG HHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCC EGEQ CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA